RNA–Protein interactions for RNA: ENST00000618999.4

SRGAP3-213, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5 BASIC

Gene SRGAP3, Length 3,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-213ENST00000618999 TNRQ92752 1358 aa9.19□□□□□ -0.94
SRGAP3-213ENST00000618999 PAK3O75914 559 aaPredicted RBP9.18□□□□□ -0.94
SRGAP3-213ENST00000618999 POGKQ9P215 609 aa9.18□□□□□ -0.94
SRGAP3-213ENST00000618999 SCAF11Q99590 1463 aaKnown RBP9.18□□□□□ -0.94
SRGAP3-213ENST00000618999 CENPJQ9HC77 1338 aaPredicted RBP9.18□□□□□ -0.94
SRGAP3-213ENST00000618999 TRPM1Q7Z4N2 1603 aa9.18□□□□□ -0.94
SRGAP3-213ENST00000618999 CLTCQ00610 1675 aaKnown RBP9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 ZC3H13Q5T200 1668 aaKnown RBP9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 ADGRB3O60242 1522 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 NEFMP07197 916 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 SPOCK2Q92563 424 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 PANK3Q9H999 370 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 SYNMO15061 1565 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 MYOM2P54296 1465 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 SMG6Q86US8 1419 aaKnown RBP9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 LAS1LQ9Y4W2 734 aaKnown RBP9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 DISP3Q9P2K9 1392 aa9.17□□□□□ -0.94
SRGAP3-213ENST00000618999 PPM1GO15355 546 aaPredicted RBP9.16□□□□□ -0.94
SRGAP3-213ENST00000618999 TCERG1O14776 1098 aaKnown RBP9.16□□□□□ -0.94
SRGAP3-213ENST00000618999 MADDQ8WXG6 1647 aa9.16□□□□□ -0.94
SRGAP3-213ENST00000618999 EID1Q9Y6B2 187 aa9.15□□□□□ -0.94
SRGAP3-213ENST00000618999 SIGLEC1Q9BZZ2 1709 aa9.15□□□□□ -0.94
SRGAP3-213ENST00000618999 CC2D1BQ5T0F9 858 aaKnown RBP9.15□□□□□ -0.94
SRGAP3-213ENST00000618999 TXNDC2Q86VQ3 553 aa9.15□□□□□ -0.94
SRGAP3-213ENST00000618999 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
SRGAP3-213ENST00000618999 KNSTRNQ9Y448 316 aa9.15□□□□□ -0.95
SRGAP3-213ENST00000618999 RIMS2Q9UQ26 1411 aa9.14□□□□□ -0.95
SRGAP3-213ENST00000618999 PIK3C2GO75747 1445 aa9.14□□□□□ -0.95
SRGAP3-213ENST00000618999 MROH2AA6NES4 1674 aa9.14□□□□□ -0.95
SRGAP3-213ENST00000618999 PREX1Q8TCU6 1659 aa9.14□□□□□ -0.95
SRGAP3-213ENST00000618999 RCAN3Q9UKA8 241 aa9.13□□□□□ -0.95
SRGAP3-213ENST00000618999 SRPK2P78362 688 aaKnown RBP9.13□□□□□ -0.95
SRGAP3-213ENST00000618999 THEMISQ8N1K5 641 aaPredicted RBP9.13□□□□□ -0.95
SRGAP3-213ENST00000618999 PRAM1Q96QH2 718 aa9.13□□□□□ -0.95
SRGAP3-213ENST00000618999 NEURL4Q96JN8 1562 aa9.13□□□□□ -0.95
SRGAP3-213ENST00000618999 MINK1Q8N4C8 1332 aaPredicted RBP9.13□□□□□ -0.95
SRGAP3-213ENST00000618999 A2ML1A8K2U0 1454 aa9.12□□□□□ -0.95
SRGAP3-213ENST00000618999 EIF5BO60841 1220 aaKnown RBP9.12□□□□□ -0.95
SRGAP3-213ENST00000618999 RRP1P56182 461 aaKnown RBP9.12□□□□□ -0.95
SRGAP3-213ENST00000618999 RALBP1Q15311 655 aa9.12□□□□□ -0.95
SRGAP3-213ENST00000618999 SLC26A8Q96RN1 970 aa9.12□□□□□ -0.95
SRGAP3-213ENST00000618999 PIK3C2BO00750 1634 aa9.11□□□□□ -0.95
SRGAP3-213ENST00000618999 LMOD2Q6P5Q4 547 aa9.11□□□□□ -0.95
SRGAP3-213ENST00000618999 USP35Q9P2H5 1018 aa9.11□□□□□ -0.95
SRGAP3-213ENST00000618999 EVC2Q86UK5 1308 aa9.11□□□□□ -0.95
SRGAP3-213ENST00000618999 NEXMIFQ5QGS0 1516 aa9.11□□□□□ -0.95
SRGAP3-213ENST00000618999 SPATA31D1Q6ZQQ2 1576 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 NRXN1Q9ULB1 1477 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 KTN1Q86UP2 1357 aaKnown RBP9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 WAPLQ7Z5K2 1190 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 CABP2Q9NPB3 220 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 ZFYVE9O95405 1425 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 PDE4AP27815 886 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 BRPF1P55201 1214 aaPredicted RBP9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 EXOC6Q8TAG9 804 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 MYBBP1AQ9BQG0 1328 aaKnown RBP9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 LTKP29376 864 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 SLC12A5Q9H2X9 1139 aa9.1□□□□□ -0.95
SRGAP3-213ENST00000618999 TMEM2Q9UHN6 1383 aa9.09□□□□□ -0.95
SRGAP3-213ENST00000618999 TMEM131LA2VDJ0 1609 aa9.09□□□□□ -0.95
SRGAP3-213ENST00000618999 PDE3BQ13370 1112 aa9.09□□□□□ -0.95
SRGAP3-213ENST00000618999 PNISRQ8TF01 805 aaKnown RBP9.09□□□□□ -0.95
SRGAP3-213ENST00000618999 LAMC1P11047 1609 aa9.08□□□□□ -0.96
SRGAP3-213ENST00000618999 PER1O15534 1290 aaPredicted RBP9.08□□□□□ -0.96
SRGAP3-213ENST00000618999 MS4A1P11836 297 aa9.08□□□□□ -0.96
SRGAP3-213ENST00000618999 PPLO60437 1756 aa9.08□□□□□ -0.96
SRGAP3-213ENST00000618999 YTHDC2Q9H6S0 1430 aaKnown RBP9.08□□□□□ -0.96
SRGAP3-213ENST00000618999 ZNF219Q9P2Y4 722 aaPredicted RBP9.08□□□□□ -0.96
SRGAP3-213ENST00000618999 NLRP13Q86W25 1043 aa9.07□□□□□ -0.96
SRGAP3-213ENST00000618999 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.07□□□□□ -0.96
SRGAP3-213ENST00000618999 NLRP1Q9C000 1473 aa9.06□□□□□ -0.96
SRGAP3-213ENST00000618999 KIAA1210Q9ULL0 1709 aa9.06□□□□□ -0.96
SRGAP3-213ENST00000618999 BRD4O60885 1362 aaPredicted RBP9.06□□□□□ -0.96
SRGAP3-213ENST00000618999 MYO5BQ9ULV0 1848 aa9.06□□□□□ -0.96
SRGAP3-213ENST00000618999 CDK19Q9BWU1 502 aa9.06□□□□□ -0.96
SRGAP3-213ENST00000618999 IFT172Q9UG01 1749 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 TNNT2P45379 298 aaPredicted RBP9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 ANKLE2Q86XL3 938 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 NUTM2FA1L443 756 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 ZBTB7CA1YPR0 619 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 ADGRB1O14514 1584 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 SETBP1Q9Y6X0 1596 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 METP08581 1390 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 SBNO2Q9Y2G9 1366 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 IQGAP1P46940 1657 aa9.05□□□□□ -0.96
SRGAP3-213ENST00000618999 WDR43Q15061 677 aaKnown RBP eCLIP9.04□□□□□ -0.96
SRGAP3-213ENST00000618999 RNF123Q5XPI4 1314 aa9.04□□□□□ -0.96
SRGAP3-213ENST00000618999 LRPPRCP42704 1394 aaKnown RBP9.04□□□□□ -0.96
SRGAP3-213ENST00000618999 ALKQ9UM73 1620 aa9.04□□□□□ -0.96
SRGAP3-213ENST00000618999 SLC24A3Q9HC58 644 aa9.04□□□□□ -0.96
SRGAP3-213ENST00000618999 APBB1O00213 710 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 STK25O00506 426 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 MORC1Q86VD1 984 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 AEBP1Q8IUX7 1158 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 IL27Q8NEV9 243 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 BACH2Q9BYV9 841 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 TERF2IPQ9NYB0 399 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 AMOTL2Q9Y2J4 779 aa9.03□□□□□ -0.96
SRGAP3-213ENST00000618999 FER1L4A9Z1Z3 1794 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms