RNA–Protein interactions for RNA: ENST00000618777.4

CNTNAP3B-214, Transcript of contactin associated protein like 3B, humanhuman

TSL 1 (best)

Gene CNTNAP3B, Length 5,256 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-214ENST00000618777 MCM2P49736 904 aa19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 KANK4Q5T7N3 995 aaPredicted RBP19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 SSR1P43307 286 aaKnown RBP19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 DHX57Q6P158 1386 aaKnown RBP19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 SMC2O95347 1197 aa19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 SPC24Q8NBT2 197 aa19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 SMARCE1Q969G3 411 aa19.69■□□□□ 0.74
CNTNAP3B-214ENST00000618777 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
CNTNAP3B-214ENST00000618777 API5Q9BZZ5 524 aaKnown RBP19.68■□□□□ 0.74
CNTNAP3B-214ENST00000618777 KIF7Q2M1P5 1343 aa19.67■□□□□ 0.74
CNTNAP3B-214ENST00000618777 CCDC192P0DO97 292 aa19.67■□□□□ 0.74
CNTNAP3B-214ENST00000618777 LNPKQ9C0E8 428 aa19.67■□□□□ 0.74
CNTNAP3B-214ENST00000618777 KINO60870 393 aaKnown RBP19.66■□□□□ 0.74
CNTNAP3B-214ENST00000618777 MEX3CQ5U5Q3 659 aaKnown RBP19.66■□□□□ 0.74
CNTNAP3B-214ENST00000618777 ROCK1Q13464 1354 aa19.66■□□□□ 0.74
CNTNAP3B-214ENST00000618777 VPS53Q5VIR6 699 aa19.66■□□□□ 0.74
CNTNAP3B-214ENST00000618777 RABEP1Q15276 862 aa19.66■□□□□ 0.74
CNTNAP3B-214ENST00000618777 TTLL5Q6EMB2 1281 aa19.65■□□□□ 0.74
CNTNAP3B-214ENST00000618777 CWC22Q9HCG8 908 aaKnown RBP19.65■□□□□ 0.74
CNTNAP3B-214ENST00000618777 APAF1O14727 1248 aa19.65■□□□□ 0.74
CNTNAP3B-214ENST00000618777 CLGNO14967 610 aa19.65■□□□□ 0.74
CNTNAP3B-214ENST00000618777 ZNF526Q8TF50 670 aaPredicted RBP19.64■□□□□ 0.74
CNTNAP3B-214ENST00000618777 OFD1O75665 1012 aa19.64■□□□□ 0.73
CNTNAP3B-214ENST00000618777 PANK3Q9H999 370 aa19.64■□□□□ 0.73
CNTNAP3B-214ENST00000618777 CTR9Q6PD62 1173 aa19.64■□□□□ 0.73
CNTNAP3B-214ENST00000618777 FILIP1LQ4L180 1135 aa19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 CENPHQ9H3R5 247 aa19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 GTF2F1P35269 517 aaKnown RBP eCLIP19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 TDO2P48775 406 aa19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 XPCQ01831 940 aaPredicted RBP19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 SAFBQ15424 915 aaKnown RBP eCLIP19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 CIZ1Q9ULV3 898 aaPredicted RBP19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 PDCP20941 246 aa19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 ZNF330Q9Y3S2 320 aaPredicted RBP19.63■□□□□ 0.73
CNTNAP3B-214ENST00000618777 NUP155O75694 1391 aa19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 ELL2O00472 640 aaPredicted RBP19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 FAM107BQ9H098 131 aa19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 STK26Q9P289 416 aa19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 ERLIN2O94905 339 aa19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 TMCO3Q6UWJ1 677 aa19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 CT47A1Q5JQC4 288 aaPredicted RBP19.62■□□□□ 0.73
CNTNAP3B-214ENST00000618777 KIF20AO95235 890 aa19.61■□□□□ 0.73
CNTNAP3B-214ENST00000618777 UBXN4Q92575 508 aa19.61■□□□□ 0.73
CNTNAP3B-214ENST00000618777 TRDNQ13061 729 aa19.6■□□□□ 0.73
CNTNAP3B-214ENST00000618777 WWC1Q8IX03 1113 aa19.6■□□□□ 0.73
CNTNAP3B-214ENST00000618777 SPDYE4A6NLX3 237 aa19.6■□□□□ 0.73
CNTNAP3B-214ENST00000618777 KIF2AO00139 706 aaPredicted RBP19.6■□□□□ 0.73
CNTNAP3B-214ENST00000618777 IFIT2P09913 472 aaKnown RBP19.6■□□□□ 0.73
CNTNAP3B-214ENST00000618777 ST20-MTHFSA0A0A6YYL1 179 aa19.6■□□□□ 0.73
CNTNAP3B-214ENST00000618777 HSP90AB2PQ58FF8 381 aa19.59■□□□□ 0.73
CNTNAP3B-214ENST00000618777 CCDC102AQ96A19 550 aa19.59■□□□□ 0.73
CNTNAP3B-214ENST00000618777 DDX11Q96FC9 970 aa19.59■□□□□ 0.73
CNTNAP3B-214ENST00000618777 LRRCC1Q9C099 1032 aa19.58■□□□□ 0.73
CNTNAP3B-214ENST00000618777 MCM5P33992 734 aa19.58■□□□□ 0.72
CNTNAP3B-214ENST00000618777 MPNDQ8N594 471 aa19.58■□□□□ 0.72
CNTNAP3B-214ENST00000618777 FBXO3Q9UK99 471 aa19.58■□□□□ 0.72
CNTNAP3B-214ENST00000618777 VGLL3A8MV65 326 aa19.58■□□□□ 0.72
CNTNAP3B-214ENST00000618777 CCDC94Q9BW85 323 aaPredicted RBP19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 GBP3Q9H0R5 595 aa19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 SHTN1A0MZ66 631 aa19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 FIBPO43427 364 aa19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 FMNL2Q96PY5 1086 aa19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 PSMA5P28066 241 aa19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 PIP4K2AP48426 406 aaPredicted RBP19.57■□□□□ 0.72
CNTNAP3B-214ENST00000618777 MNAT1P51948 309 aa19.56■□□□□ 0.72
CNTNAP3B-214ENST00000618777 CCDC27Q2M243 656 aa19.56■□□□□ 0.72
CNTNAP3B-214ENST00000618777 ODF2Q5BJF6 829 aa19.56■□□□□ 0.72
CNTNAP3B-214ENST00000618777 NEK4P51957 841 aa19.56■□□□□ 0.72
CNTNAP3B-214ENST00000618777 ERC2O15083 957 aa19.56■□□□□ 0.72
CNTNAP3B-214ENST00000618777 NOL10Q9BSC4 688 aaKnown RBP19.56■□□□□ 0.72
CNTNAP3B-214ENST00000618777 DNAAF4Q8WXU2 420 aa19.55■□□□□ 0.72
CNTNAP3B-214ENST00000618777 PRIMPOLQ96LW4 560 aa19.55■□□□□ 0.72
CNTNAP3B-214ENST00000618777 HSP90AB4PQ58FF6 505 aa19.55■□□□□ 0.72
CNTNAP3B-214ENST00000618777 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.55■□□□□ 0.72
CNTNAP3B-214ENST00000618777 TRIM34Q9BYJ4 488 aa19.55■□□□□ 0.72
CNTNAP3B-214ENST00000618777 IQCEQ6IPM2 695 aa19.54■□□□□ 0.72
CNTNAP3B-214ENST00000618777 ANKRD30AQ9BXX3 1397 aa19.54■□□□□ 0.72
CNTNAP3B-214ENST00000618777 K7ELQ4 463 aaPredicted RBP19.54■□□□□ 0.72
CNTNAP3B-214ENST00000618777 WDR33Q9C0J8 1336 aaKnown RBP19.53■□□□□ 0.72
CNTNAP3B-214ENST00000618777 SERPINC1P01008 464 aa19.53■□□□□ 0.72
CNTNAP3B-214ENST00000618777 BRD2P25440 801 aaKnown RBP19.53■□□□□ 0.72
CNTNAP3B-214ENST00000618777 TICAM2Q86XR7 235 aa19.53■□□□□ 0.72
CNTNAP3B-214ENST00000618777 TNMDQ9H2S6 317 aa19.53■□□□□ 0.72
CNTNAP3B-214ENST00000618777 ZNHIT6Q9NWK9 470 aaKnown RBP19.53■□□□□ 0.72
CNTNAP3B-214ENST00000618777 SOGA1O94964 1423 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 CCDC181Q5TID7 509 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 PANK1Q8TE04 598 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 CBFA2T2O43439 604 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 FOSBP53539 338 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 NFXL1Q6ZNB6 911 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 PPFIBP1Q86W92 1011 aa19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 ZNF396Q96N95 335 aaPredicted RBP19.52■□□□□ 0.72
CNTNAP3B-214ENST00000618777 EPS15P42566 896 aa19.51■□□□□ 0.71
CNTNAP3B-214ENST00000618777 FILIP1Q7Z7B0 1213 aa19.51■□□□□ 0.71
CNTNAP3B-214ENST00000618777 KRT222Q8N1A0 295 aa19.51■□□□□ 0.71
CNTNAP3B-214ENST00000618777 TXLNBQ8N3L3 684 aa19.51■□□□□ 0.71
CNTNAP3B-214ENST00000618777 IBSPP21815 317 aaPredicted RBP19.5■□□□□ 0.71
CNTNAP3B-214ENST00000618777 LUC7LQ9NQ29 371 aaKnown RBP19.5■□□□□ 0.71
CNTNAP3B-214ENST00000618777 USP47Q96K76 1375 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms