RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 KIF16BQ96L93 1317 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 HSP90B1P14625 803 aaKnown RBP8.99□□□□□ -0.97
PDE6A-205ENST00000617647 PRIM1P49642 420 aaKnown RBP8.99□□□□□ -0.97
PDE6A-205ENST00000617647 CCDC146Q8IYE0 955 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 NOL10Q9BSC4 688 aaKnown RBP8.99□□□□□ -0.97
PDE6A-205ENST00000617647 RBSNQ9H1K0 784 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 PHLDB1Q86UU1 1377 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 LOC102724159A0A0B4J2E5 919 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 PWP2Q15269 919 aaKnown RBP8.99□□□□□ -0.97
PDE6A-205ENST00000617647 KDM2BQ8NHM5 1336 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 MTUS2Q5JR59 1369 aa8.99□□□□□ -0.97
PDE6A-205ENST00000617647 CCDC18Q5T9S5 1454 aa8.98□□□□□ -0.97
PDE6A-205ENST00000617647 FANCD2Q9BXW9 1451 aa8.98□□□□□ -0.97
PDE6A-205ENST00000617647 IGHDP01880 384 aa8.98□□□□□ -0.97
PDE6A-205ENST00000617647 C17orf53Q8N3J3 647 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-205ENST00000617647 MYCBPQ99417 103 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-205ENST00000617647 TTC12Q9H892 705 aaPredicted RBP8.98□□□□□ -0.97
PDE6A-205ENST00000617647 SOX12O15370 315 aa8.98□□□□□ -0.97
PDE6A-205ENST00000617647 LRRIQ1Q96JM4 1722 aa8.97□□□□□ -0.97
PDE6A-205ENST00000617647 BCAR3O75815 825 aa8.97□□□□□ -0.97
PDE6A-205ENST00000617647 MPHOSPH9Q99550 1183 aa8.97□□□□□ -0.97
PDE6A-205ENST00000617647 TDO2P48775 406 aa8.97□□□□□ -0.97
PDE6A-205ENST00000617647 BCL2L13Q9BXK5 485 aa8.97□□□□□ -0.97
PDE6A-205ENST00000617647 ROCK2O75116 1388 aaKnown RBP8.97□□□□□ -0.97
PDE6A-205ENST00000617647 CC2D2AQ9P2K1 1620 aa8.97□□□□□ -0.97
PDE6A-205ENST00000617647 BAG4O95429 457 aaKnown RBP8.97□□□□□ -0.97
PDE6A-205ENST00000617647 TPD52L1Q16890 204 aaPredicted RBP8.97□□□□□ -0.97
PDE6A-205ENST00000617647 POLR3GO15318 223 aaPredicted RBP8.96□□□□□ -0.97
PDE6A-205ENST00000617647 RIOK3O14730 519 aaKnown RBP8.96□□□□□ -0.97
PDE6A-205ENST00000617647 SETQ01105 290 aaPredicted RBP8.96□□□□□ -0.97
PDE6A-205ENST00000617647 CTR9Q6PD62 1173 aa8.96□□□□□ -0.97
PDE6A-205ENST00000617647 RTF1Q92541 710 aaKnown RBP8.96□□□□□ -0.97
PDE6A-205ENST00000617647 USP25Q9UHP3 1055 aa8.96□□□□□ -0.97
PDE6A-205ENST00000617647 LRRC9Q6ZRR7 1453 aa8.96□□□□□ -0.98
PDE6A-205ENST00000617647 FMN1Q68DA7 1419 aa8.96□□□□□ -0.98
PDE6A-205ENST00000617647 K7ELQ4 463 aaPredicted RBP8.96□□□□□ -0.98
PDE6A-205ENST00000617647 NGEFQ8N5V2 710 aa8.96□□□□□ -0.98
PDE6A-205ENST00000617647 DRC1Q96MC2 740 aa8.96□□□□□ -0.98
PDE6A-205ENST00000617647 KNSTRNQ9Y448 316 aa8.96□□□□□ -0.98
PDE6A-205ENST00000617647 DNMBPQ6XZF7 1577 aa8.95□□□□□ -0.98
PDE6A-205ENST00000617647 MBD3O95983 291 aa8.95□□□□□ -0.98
PDE6A-205ENST00000617647 NOL8Q76FK4 1167 aaKnown RBP8.95□□□□□ -0.98
PDE6A-205ENST00000617647 ATXN8OSP0DMR3 200 aa8.95□□□□□ -0.98
PDE6A-205ENST00000617647 CASC1Q6TDU7 716 aa8.95□□□□□ -0.98
PDE6A-205ENST00000617647 NCOA1Q15788 1441 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 PCF11O94913 1555 aaKnown RBP8.94□□□□□ -0.98
PDE6A-205ENST00000617647 USP47Q96K76 1375 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 RAB3GAP1Q15042 981 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 SAMD1Q6SPF0 538 aaPredicted RBP8.94□□□□□ -0.98
PDE6A-205ENST00000617647 C16orf45Q96MC5 204 aaPredicted RBP8.94□□□□□ -0.98
PDE6A-205ENST00000617647 EFCC1Q9HA90 598 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 EIF3AQ14152 1382 aaKnown RBP8.94□□□□□ -0.98
PDE6A-205ENST00000617647 TPM3P06753 285 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 TPM4P67936 248 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 ITPRIPQ8IWB1 547 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 SLC26A8Q96RN1 970 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 EFCAB5A4FU69 1503 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 NINLQ9Y2I6 1382 aa8.94□□□□□ -0.98
PDE6A-205ENST00000617647 ST18O60284 1047 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 LRSAM1Q6UWE0 723 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 UACAQ9BZF9 1416 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 ARID3CA6NKF2 412 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 NBPF8Q3BBV2 869 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 LEKR1Q6ZMV7 388 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 ARGLU1Q9NWB6 273 aaPredicted RBP8.93□□□□□ -0.98
PDE6A-205ENST00000617647 PIBF1Q8WXW3 757 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 AK7Q96M32 723 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 CUL7Q14999 1698 aa8.93□□□□□ -0.98
PDE6A-205ENST00000617647 ADCY5O95622 1261 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 CCDC191Q8NCU4 936 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 SMC4Q9NTJ3 1288 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 FHOD3Q2V2M9 1422 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 GOLIM4O00461 696 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 NRDCO43847 1150 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.92□□□□□ -0.98
PDE6A-205ENST00000617647 ADAMTS8Q9UP79 889 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 V9GYY5 206 aaPredicted RBP8.92□□□□□ -0.98
PDE6A-205ENST00000617647 FYCO1Q9BQS8 1478 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 TTLL5Q6EMB2 1281 aa8.92□□□□□ -0.98
PDE6A-205ENST00000617647 ST20-MTHFSA0A0A6YYL1 179 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 GNL2Q13823 731 aaKnown RBP8.91□□□□□ -0.98
PDE6A-205ENST00000617647 ZNF445P59923 1031 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 SKIDA1Q1XH10 827 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 RAD54L2Q9Y4B4 1467 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 ABCA10Q8WWZ4 1543 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 TOPBP1Q92547 1522 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 VGFO15240 615 aaPredicted RBP8.91□□□□□ -0.98
PDE6A-205ENST00000617647 CTTNBP2Q8WZ74 1663 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 USP19O94966 1318 aa8.91□□□□□ -0.98
PDE6A-205ENST00000617647 GOLGA6L4A6NEF3 574 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 TTC31Q49AM3 519 aaPredicted RBP8.9□□□□□ -0.98
PDE6A-205ENST00000617647 KRBA2Q6ZNG9 492 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 TXLNBQ8N3L3 684 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 APAF1O14727 1248 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 TERF2Q15554 542 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 ZNF710Q8N1W2 664 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 LNPKQ9C0E8 428 aa8.9□□□□□ -0.98
PDE6A-205ENST00000617647 GTF3C6Q969F1 213 aa8.9□□□□□ -0.99
PDE6A-205ENST00000617647 POLA1P09884 1462 aaPredicted RBP8.9□□□□□ -0.99
PDE6A-205ENST00000617647 PDE3AQ14432 1141 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms