RNA–Protein interactions for RNA: ENST00000617428.2

AC008878.3-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC008878.3, Length 4,964 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008878.3-201ENST00000617428 CPLX1O14810 134 aa22.66■■□□□ 1.22
AC008878.3-201ENST00000617428 DHX16O60231 1041 aaKnown RBP22.66■■□□□ 1.22
AC008878.3-201ENST00000617428 GAS2L2Q8NHY3 880 aa22.66■■□□□ 1.22
AC008878.3-201ENST00000617428 ATP6V1DQ9Y5K8 247 aa22.66■■□□□ 1.22
AC008878.3-201ENST00000617428 UBTFL1P0CB47 393 aaPredicted RBP22.66■■□□□ 1.22
AC008878.3-201ENST00000617428 POLA1P09884 1462 aaPredicted RBP22.65■■□□□ 1.22
AC008878.3-201ENST00000617428 CDK19Q9BWU1 502 aa22.65■■□□□ 1.22
AC008878.3-201ENST00000617428 FAM177BA6PVY3 158 aa22.65■■□□□ 1.22
AC008878.3-201ENST00000617428 PLEKHO1Q53GL0 409 aaPredicted RBP22.65■■□□□ 1.22
AC008878.3-201ENST00000617428 HFM1A2PYH4 1435 aa22.65■■□□□ 1.22
AC008878.3-201ENST00000617428 PES1O00541 588 aaKnown RBP22.65■■□□□ 1.22
AC008878.3-201ENST00000617428 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.22
AC008878.3-201ENST00000617428 TROQ12816 1431 aaPredicted RBP22.64■■□□□ 1.22
AC008878.3-201ENST00000617428 PPP2R1AP30153 589 aa22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 PDE4CQ08493 712 aa22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 RBM42Q9BTD8 480 aaKnown RBP22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 ANKLE2Q86XL3 938 aa22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 DDX49Q9Y6V7 483 aaKnown RBP22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 CNTLNQ9NXG0 1405 aa22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 PHF14O94880 888 aa22.63■■□□□ 1.21
AC008878.3-201ENST00000617428 RNF20Q5VTR2 975 aa22.62■■□□□ 1.21
AC008878.3-201ENST00000617428 CTDP1Q9Y5B0 961 aaPredicted RBP22.62■■□□□ 1.21
AC008878.3-201ENST00000617428 SYNJ1O43426 1573 aa22.62■■□□□ 1.21
AC008878.3-201ENST00000617428 TRIM29Q14134 588 aa22.61■■□□□ 1.21
AC008878.3-201ENST00000617428 CC2D2AQ9P2K1 1620 aa22.61■■□□□ 1.21
AC008878.3-201ENST00000617428 ERC2O15083 957 aa22.61■■□□□ 1.21
AC008878.3-201ENST00000617428 NOC3LQ8WTT2 800 aaKnown RBP22.61■■□□□ 1.21
AC008878.3-201ENST00000617428 SULT6B1Q6IMI4 303 aa22.6■■□□□ 1.21
AC008878.3-201ENST00000617428 ERICH3Q5RHP9 1530 aa22.6■■□□□ 1.21
AC008878.3-201ENST00000617428 NBPF8Q3BBV2 869 aa22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 ZNF692Q9BU19 519 aaPredicted RBP22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 PLEKHH2Q8IVE3 1493 aa22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 TPD52L1Q16890 204 aaPredicted RBP22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 WASHC4Q2M389 1173 aa22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 CCDC30Q5VVM6 783 aa22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 CDCA7LQ96GN5 454 aa22.59■■□□□ 1.21
AC008878.3-201ENST00000617428 TATP17735 454 aaPredicted RBP22.58■■□□□ 1.21
AC008878.3-201ENST00000617428 BRD4O60885 1362 aaPredicted RBP22.58■■□□□ 1.2
AC008878.3-201ENST00000617428 DDX11L8A8MPP1 907 aa22.58■■□□□ 1.2
AC008878.3-201ENST00000617428 NFXL1Q6ZNB6 911 aa22.58■■□□□ 1.2
AC008878.3-201ENST00000617428 EXOSC9Q06265 439 aaKnown RBP22.57■■□□□ 1.2
AC008878.3-201ENST00000617428 TOM1L2Q6ZVM7 507 aa22.57■■□□□ 1.2
AC008878.3-201ENST00000617428 DDX54Q8TDD1 881 aaKnown RBP22.56■■□□□ 1.2
AC008878.3-201ENST00000617428 KIAA1107Q9UPP5 1409 aa22.56■■□□□ 1.2
AC008878.3-201ENST00000617428 SURF6O75683 361 aaKnown RBP22.56■■□□□ 1.2
AC008878.3-201ENST00000617428 INTS3Q68E01 1043 aaKnown RBP22.56■■□□□ 1.2
AC008878.3-201ENST00000617428 SAMD1Q6SPF0 538 aaPredicted RBP22.55■■□□□ 1.2
AC008878.3-201ENST00000617428 TCEAL9Q9UHQ7 104 aa22.55■■□□□ 1.2
AC008878.3-201ENST00000617428 CCDC27Q2M243 656 aa22.55■■□□□ 1.2
AC008878.3-201ENST00000617428 BECN2A8MW95 431 aa22.55■■□□□ 1.2
AC008878.3-201ENST00000617428 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
AC008878.3-201ENST00000617428 GNAI3P08754 354 aa22.55■■□□□ 1.2
AC008878.3-201ENST00000617428 TWISTNBQ3B726 338 aaPredicted RBP22.54■■□□□ 1.2
AC008878.3-201ENST00000617428 ERICH2A1L162 156 aa22.54■■□□□ 1.2
AC008878.3-201ENST00000617428 CLASRPQ8N2M8 674 aaKnown RBP22.54■■□□□ 1.2
AC008878.3-201ENST00000617428 FYB1O15117 783 aa22.53■■□□□ 1.2
AC008878.3-201ENST00000617428 PRDM11Q9NQV5 511 aa22.53■■□□□ 1.2
AC008878.3-201ENST00000617428 CEP89Q96ST8 783 aa22.53■■□□□ 1.2
AC008878.3-201ENST00000617428 RALYLQ86SE5 291 aaKnown RBP22.52■■□□□ 1.2
AC008878.3-201ENST00000617428 DNAJC5BQ9UF47 199 aa22.52■■□□□ 1.2
AC008878.3-201ENST00000617428 TPM3P06753 285 aa22.52■■□□□ 1.2
AC008878.3-201ENST00000617428 XPCQ01831 940 aaPredicted RBP22.52■■□□□ 1.2
AC008878.3-201ENST00000617428 ZNF530Q6P9A1 599 aaPredicted RBP22.52■■□□□ 1.2
AC008878.3-201ENST00000617428 GOLGA6L19H0YKK7 550 aa22.52■■□□□ 1.2
AC008878.3-201ENST00000617428 HDGFL1Q5TGJ6 251 aa22.51■■□□□ 1.19
AC008878.3-201ENST00000617428 VPS37CA5D8V6 355 aaPredicted RBP22.51■■□□□ 1.19
AC008878.3-201ENST00000617428 TSR2Q969E8 191 aaKnown RBP22.51■■□□□ 1.19
AC008878.3-201ENST00000617428 RTEL1-TNFRSF6BF6WH68 1400 aa22.51■■□□□ 1.19
AC008878.3-201ENST00000617428 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP22.51■■□□□ 1.19
AC008878.3-201ENST00000617428 EFCAB5A4FU69 1503 aa22.5■■□□□ 1.19
AC008878.3-201ENST00000617428 SMG6Q86US8 1419 aaKnown RBP22.49■■□□□ 1.19
AC008878.3-201ENST00000617428 ARID3AQ99856 593 aa22.49■■□□□ 1.19
AC008878.3-201ENST00000617428 KIF6Q6ZMV9 814 aa22.49■■□□□ 1.19
AC008878.3-201ENST00000617428 SLC4A2P04920 1241 aa22.48■■□□□ 1.19
AC008878.3-201ENST00000617428 CABP4P57796 275 aa22.48■■□□□ 1.19
AC008878.3-201ENST00000617428 FSD1Q9BTV5 496 aa22.48■■□□□ 1.19
AC008878.3-201ENST00000617428 POGZQ7Z3K3 1410 aa22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 SMC3Q9UQE7 1217 aa22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 AAMPQ13685 434 aa22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 TSR1Q2NL82 804 aaKnown RBP22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 ZNF428Q96B54 188 aa22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 EHBP1L1Q8N3D4 1523 aa22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 ERBINQ96RT1 1412 aa22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 RRS1Q15050 365 aaKnown RBP22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 ANO8Q9HCE9 1232 aaPredicted RBP22.47■■□□□ 1.19
AC008878.3-201ENST00000617428 RPGRIP1LQ68CZ1 1315 aa22.46■■□□□ 1.19
AC008878.3-201ENST00000617428 PIP4K2BP78356 416 aa22.46■■□□□ 1.19
AC008878.3-201ENST00000617428 BICD2Q8TD16 824 aa22.46■■□□□ 1.19
AC008878.3-201ENST00000617428 FOSBP53539 338 aa22.46■■□□□ 1.19
AC008878.3-201ENST00000617428 ZC3H6P61129 1189 aaKnown RBP22.46■■□□□ 1.19
AC008878.3-201ENST00000617428 WWC1Q8IX03 1113 aa22.45■■□□□ 1.18
AC008878.3-201ENST00000617428 C22orf23Q9BZE7 217 aa22.44■■□□□ 1.18
AC008878.3-201ENST00000617428 MTMR7Q9Y216 660 aa22.44■■□□□ 1.18
AC008878.3-201ENST00000617428 ANKRD30BQ9BXX2 1392 aa22.44■■□□□ 1.18
AC008878.3-201ENST00000617428 HMGXB3Q12766 1538 aa22.44■■□□□ 1.18
AC008878.3-201ENST00000617428 KIAA0586Q9BVV6 1533 aa22.44■■□□□ 1.18
AC008878.3-201ENST00000617428 SKOR2Q2VWA4 1001 aaPredicted RBP22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms