RNA–Protein interactions for RNA: ENST00000617422.4

CNTNAP3B-212, Transcript of contactin associated protein like 3B, humanhuman

TSL 2 BASIC

Gene CNTNAP3B, Length 2,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-212ENST00000617422 POGKQ9P215 609 aa27.99■■■□□ 2.07
CNTNAP3B-212ENST00000617422 ARHGAP23Q9P227 1491 aa27.99■■■□□ 2.07
CNTNAP3B-212ENST00000617422 SLIT1O75093 1534 aa27.99■■■□□ 2.07
CNTNAP3B-212ENST00000617422 TMC1Q8TDI8 760 aa27.99■■■□□ 2.07
CNTNAP3B-212ENST00000617422 ABCC11Q96J66 1382 aa27.98■■■□□ 2.07
CNTNAP3B-212ENST00000617422 WAPLQ7Z5K2 1190 aa27.98■■■□□ 2.07
CNTNAP3B-212ENST00000617422 TXNDC2Q86VQ3 553 aa27.97■■■□□ 2.07
CNTNAP3B-212ENST00000617422 NLRP13Q86W25 1043 aa27.97■■■□□ 2.07
CNTNAP3B-212ENST00000617422 PLEKHG1Q9ULL1 1385 aa27.96■■■□□ 2.07
CNTNAP3B-212ENST00000617422 PUS7Q96PZ0 661 aaKnown RBP27.95■■■□□ 2.06
CNTNAP3B-212ENST00000617422 BCANQ96GW7 911 aa27.94■■■□□ 2.06
CNTNAP3B-212ENST00000617422 NPC1L1Q9UHC9 1359 aa27.93■■■□□ 2.06
CNTNAP3B-212ENST00000617422 CEP170BQ9Y4F5 1589 aaPredicted RBP27.92■■■□□ 2.06
CNTNAP3B-212ENST00000617422 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
CNTNAP3B-212ENST00000617422 MED14O60244 1454 aa27.92■■■□□ 2.06
CNTNAP3B-212ENST00000617422 TECPR2O15040 1411 aa27.9■■■□□ 2.06
CNTNAP3B-212ENST00000617422 SRPK2P78362 688 aaKnown RBP27.9■■■□□ 2.06
CNTNAP3B-212ENST00000617422 NSD3Q9BZ95 1437 aa27.89■■■□□ 2.06
CNTNAP3B-212ENST00000617422 THEMISQ8N1K5 641 aaPredicted RBP27.89■■■□□ 2.06
CNTNAP3B-212ENST00000617422 SLC26A8Q96RN1 970 aa27.88■■■□□ 2.05
CNTNAP3B-212ENST00000617422 EID1Q9Y6B2 187 aa27.88■■■□□ 2.05
CNTNAP3B-212ENST00000617422 PPP2R1AP30153 589 aa27.87■■■□□ 2.05
CNTNAP3B-212ENST00000617422 CDK19Q9BWU1 502 aa27.87■■■□□ 2.05
CNTNAP3B-212ENST00000617422 CPS1P31327 1500 aa27.87■■■□□ 2.05
CNTNAP3B-212ENST00000617422 PTPRUQ92729 1446 aa27.84■■■□□ 2.05
CNTNAP3B-212ENST00000617422 ANKRD36BQ8N2N9 1353 aa27.84■■■□□ 2.05
CNTNAP3B-212ENST00000617422 ROBO2Q9HCK4 1378 aa27.84■■■□□ 2.05
CNTNAP3B-212ENST00000617422 FAM135BQ49AJ0 1406 aa27.83■■■□□ 2.05
CNTNAP3B-212ENST00000617422 ATAD2Q6PL18 1390 aa27.81■■■□□ 2.04
CNTNAP3B-212ENST00000617422 CD163L1Q9NR16 1453 aa27.81■■■□□ 2.04
CNTNAP3B-212ENST00000617422 USP32Q8NFA0 1604 aa27.81■■■□□ 2.04
CNTNAP3B-212ENST00000617422 ZNF142P52746 1687 aaPredicted RBP27.81■■■□□ 2.04
CNTNAP3B-212ENST00000617422 SENP3-EIF4A1A0A087X0R7 540 aa27.8■■■□□ 2.04
CNTNAP3B-212ENST00000617422 A0A1W2PP64 1363 aa27.8■■■□□ 2.04
CNTNAP3B-212ENST00000617422 SIRT1Q96EB6 747 aa27.8■■■□□ 2.04
CNTNAP3B-212ENST00000617422 ZBED9Q6R2W3 1325 aa27.79■■■□□ 2.04
CNTNAP3B-212ENST00000617422 NINLQ9Y2I6 1382 aa27.78■■■□□ 2.04
CNTNAP3B-212ENST00000617422 SETD1BQ9UPS6 1966 aaKnown RBP27.77■■■□□ 2.04
CNTNAP3B-212ENST00000617422 TBX22Q9Y458 520 aa27.76■■■□□ 2.03
CNTNAP3B-212ENST00000617422 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.75■■■□□ 2.03
CNTNAP3B-212ENST00000617422 WASLO00401 505 aaPredicted RBP27.75■■■□□ 2.03
CNTNAP3B-212ENST00000617422 CABP1Q9NZU7 370 aa27.74■■■□□ 2.03
CNTNAP3B-212ENST00000617422 DIP2AQ14689 1571 aa27.71■■■□□ 2.03
CNTNAP3B-212ENST00000617422 CGNL1Q0VF96 1302 aa27.71■■■□□ 2.03
CNTNAP3B-212ENST00000617422 AMOTL2Q9Y2J4 779 aa27.7■■■□□ 2.03
CNTNAP3B-212ENST00000617422 NCKAP5LQ9HCH0 1330 aa27.69■■■□□ 2.02
CNTNAP3B-212ENST00000617422 MORC1Q86VD1 984 aa27.67■■■□□ 2.02
CNTNAP3B-212ENST00000617422 TERF2IPQ9NYB0 399 aa27.67■■■□□ 2.02
CNTNAP3B-212ENST00000617422 XRN1Q8IZH2 1706 aaKnown RBP27.67■■■□□ 2.02
CNTNAP3B-212ENST00000617422 TNNT2P45379 298 aaPredicted RBP27.66■■■□□ 2.02
CNTNAP3B-212ENST00000617422 ADGRB2O60241 1585 aa27.66■■■□□ 2.02
CNTNAP3B-212ENST00000617422 PRR36Q9H6K5 1346 aa27.65■■■□□ 2.02
CNTNAP3B-212ENST00000617422 ADAMTS8Q9UP79 889 aa27.65■■■□□ 2.02
CNTNAP3B-212ENST00000617422 BLMP54132 1417 aaPredicted RBP27.65■■■□□ 2.02
CNTNAP3B-212ENST00000617422 ANKLE2Q86XL3 938 aa27.64■■■□□ 2.02
CNTNAP3B-212ENST00000617422 NUDT16Q96DE0 195 aaKnown RBP27.64■■■□□ 2.02
CNTNAP3B-212ENST00000617422 PTCH1Q13635 1447 aa27.64■■■□□ 2.01
CNTNAP3B-212ENST00000617422 PPIP5K1Q6PFW1 1433 aa27.64■■■□□ 2.01
CNTNAP3B-212ENST00000617422 ATP7BP35670 1465 aa27.63■■■□□ 2.01
CNTNAP3B-212ENST00000617422 NSD2O96028 1365 aa27.62■■■□□ 2.01
CNTNAP3B-212ENST00000617422 FYB1O15117 783 aa27.61■■■□□ 2.01
CNTNAP3B-212ENST00000617422 HDGFL2Q7Z4V5 671 aaPredicted RBP27.61■■■□□ 2.01
CNTNAP3B-212ENST00000617422 GGNBP2Q9H3C7 697 aa27.6■■■□□ 2.01
CNTNAP3B-212ENST00000617422 INSRP06213 1382 aa27.6■■■□□ 2.01
CNTNAP3B-212ENST00000617422 CPSF1Q10570 1443 aaKnown RBP27.6■■■□□ 2.01
CNTNAP3B-212ENST00000617422 KCNA6P17658 529 aa27.59■■■□□ 2.01
CNTNAP3B-212ENST00000617422 ANKRD26Q9UPS8 1709 aa27.58■■■□□ 2.01
CNTNAP3B-212ENST00000617422 CCDC61Q9Y6R9 512 aa27.58■■■□□ 2
CNTNAP3B-212ENST00000617422 POLR3AO14802 1390 aaPredicted RBP27.56■■■□□ 2
CNTNAP3B-212ENST00000617422 TSHZ2Q9NRE2 1034 aa27.56■■■□□ 2
CNTNAP3B-212ENST00000617422 KIF20BQ96Q89 1820 aa27.56■■■□□ 2
CNTNAP3B-212ENST00000617422 CDC42BPGQ6DT37 1551 aa27.56■■■□□ 2
CNTNAP3B-212ENST00000617422 PIK3R4Q99570 1358 aa27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 SALL2Q9Y467 1007 aaPredicted RBP27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 CHD2O14647 1828 aaKnown RBP27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 TOPAZ1Q8N9V7 1692 aa27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 NUTM2FA1L443 756 aa27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 SHPRHQ149N8 1683 aa27.55■■■□□ 2
CNTNAP3B-212ENST00000617422 MTHFSP49914 203 aa27.53■■■□□ 2
CNTNAP3B-212ENST00000617422 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.53■■■□□ 2
CNTNAP3B-212ENST00000617422 MON2Q7Z3U7 1717 aa27.53■■■□□ 2
CNTNAP3B-212ENST00000617422 AKAP12Q02952 1782 aa27.53■■■□□ 2
CNTNAP3B-212ENST00000617422 NPHP4O75161 1426 aaPredicted RBP27.5■■□□□ 1.99
CNTNAP3B-212ENST00000617422 SMG6Q86US8 1419 aaKnown RBP27.5■■□□□ 1.99
CNTNAP3B-212ENST00000617422 ITSN1Q15811 1721 aa27.5■■□□□ 1.99
CNTNAP3B-212ENST00000617422 NKTRP30414 1462 aaKnown RBP27.49■■□□□ 1.99
CNTNAP3B-212ENST00000617422 EDC4Q6P2E9 1401 aaKnown RBP27.49■■□□□ 1.99
CNTNAP3B-212ENST00000617422 NEFLP07196 543 aa27.48■■□□□ 1.99
CNTNAP3B-212ENST00000617422 RGPD8O14715 1765 aaPredicted RBP27.48■■□□□ 1.99
CNTNAP3B-212ENST00000617422 FKBP8Q14318 412 aa27.47■■□□□ 1.99
CNTNAP3B-212ENST00000617422 CCDC146Q8IYE0 955 aa27.46■■□□□ 1.99
CNTNAP3B-212ENST00000617422 NME9Q86XW9 330 aa27.45■■□□□ 1.98
CNTNAP3B-212ENST00000617422 ZRANB1Q9UGI0 708 aa27.45■■□□□ 1.98
CNTNAP3B-212ENST00000617422 NUDCQ9Y266 331 aa27.45■■□□□ 1.98
CNTNAP3B-212ENST00000617422 RBM33Q96EV2 1170 aaKnown RBP27.43■■□□□ 1.98
CNTNAP3B-212ENST00000617422 PLEKHG3A1L390 1219 aa27.43■■□□□ 1.98
CNTNAP3B-212ENST00000617422 FBLN1P23142 703 aa27.43■■□□□ 1.98
CNTNAP3B-212ENST00000617422 ACEP12821 1306 aa27.43■■□□□ 1.98
CNTNAP3B-212ENST00000617422 NALCNQ8IZF0 1738 aa27.42■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms