RNA–Protein interactions for RNA: ENST00000617103.4

CLTCL1-209, Transcript of clathrin heavy chain like 1, humanhuman

TSL 1 (best)

Gene CLTCL1, Length 4,859 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-209ENST00000617103 NCBP3Q53F19 620 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 PCMTD1Q96MG8 357 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 CWC22Q9HCG8 908 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 PNISRQ8TF01 805 aaKnown RBP12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 SDF4Q9BRK5 362 aa12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 CIZ1Q9ULV3 898 aaPredicted RBP12.85□□□□□ -0.35
CLTCL1-209ENST00000617103 TEFQ10587 303 aa12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 FBXW7Q969H0 707 aa12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 CCDC47Q96A33 483 aaKnown RBP12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 MYOM3Q5VTT5 1437 aa12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 CDR1P51861 262 aa12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 TCP11L2Q8N4U5 519 aa12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 PDS5BQ9NTI5 1447 aa12.84□□□□□ -0.35
CLTCL1-209ENST00000617103 G3BP1Q13283 466 aaKnown RBP eCLIP12.83□□□□□ -0.35
CLTCL1-209ENST00000617103 PATL2C9JE40 543 aaKnown RBP12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 BCL11BQ9C0K0 894 aaPredicted RBP12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 UQCRHP07919 91 aa12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 TRDNQ13061 729 aa12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 PDCP20941 246 aa12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 GCC1Q96CN9 775 aa12.83□□□□□ -0.36
CLTCL1-209ENST00000617103 EIF2S2P20042 333 aaKnown RBP12.82□□□□□ -0.36
CLTCL1-209ENST00000617103 K7ELQ4 463 aaPredicted RBP12.82□□□□□ -0.36
CLTCL1-209ENST00000617103 CCP110O43303 1012 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 PSMA5P28066 241 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 PPP2R1AP30153 589 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 ZSCAN30Q86W11 494 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 NUTM2FA1L443 756 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 OLFM4Q6UX06 510 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 NINLQ9Y2I6 1382 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 KIF21BO75037 1637 aa12.81□□□□□ -0.36
CLTCL1-209ENST00000617103 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 H0YHG0 523 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 CCDC27Q2M243 656 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 CCDC112Q8NEF3 446 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 KINO60870 393 aaKnown RBP12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 FIBPO43427 364 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 BCAR3O75815 825 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 LRRC9Q6ZRR7 1453 aa12.8□□□□□ -0.36
CLTCL1-209ENST00000617103 SAFBQ15424 915 aaKnown RBP eCLIP12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 RRBP1Q9P2E9 1410 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 PDILTQ8N807 584 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 NECTIN2Q92692 538 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 JPH4Q96JJ6 628 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 CADPSQ9ULU8 1353 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 LEKR1Q6ZMV7 388 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 SPC24Q8NBT2 197 aa12.79□□□□□ -0.36
CLTCL1-209ENST00000617103 APPP05067 770 aa12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 DHX8Q14562 1220 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 CNTROBQ8N137 903 aa12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 MTHFSP49914 203 aa12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 EID1Q9Y6B2 187 aa12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 FOSBP53539 338 aa12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 EXOSC9Q06265 439 aaKnown RBP12.78□□□□□ -0.36
CLTCL1-209ENST00000617103 WDR33Q9C0J8 1336 aaKnown RBP12.77□□□□□ -0.36
CLTCL1-209ENST00000617103 PODXL2Q9NZ53 605 aa12.77□□□□□ -0.36
CLTCL1-209ENST00000617103 TSPYL4Q9UJ04 414 aa12.77□□□□□ -0.36
CLTCL1-209ENST00000617103 CUX1P39880 1505 aa12.77□□□□□ -0.36
CLTCL1-209ENST00000617103 CCDC184Q52MB2 194 aa12.77□□□□□ -0.37
CLTCL1-209ENST00000617103 SMC2O95347 1197 aa12.77□□□□□ -0.37
CLTCL1-209ENST00000617103 GNAI3P08754 354 aa12.77□□□□□ -0.37
CLTCL1-209ENST00000617103 UBTFL1P0CB47 393 aaPredicted RBP12.77□□□□□ -0.37
CLTCL1-209ENST00000617103 VPS53Q5VIR6 699 aa12.77□□□□□ -0.37
CLTCL1-209ENST00000617103 NFXL1Q6ZNB6 911 aa12.77□□□□□ -0.37
CLTCL1-209ENST00000617103 CALRP27797 417 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-209ENST00000617103 RALYLQ86SE5 291 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-209ENST00000617103 HMOX1P09601 288 aa12.76□□□□□ -0.37
CLTCL1-209ENST00000617103 RDXP35241 583 aaKnown RBP12.76□□□□□ -0.37
CLTCL1-209ENST00000617103 CLASRPQ8N2M8 674 aaKnown RBP12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 CT47B1P0C2W7 299 aaPredicted RBP12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 NAP1L1P55209 391 aaKnown RBP12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 DCTN1Q14203 1278 aa12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 RRP12Q5JTH9 1297 aaKnown RBP12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 TRHP20396 242 aaPredicted RBP12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 MPNDQ8N594 471 aa12.75□□□□□ -0.37
CLTCL1-209ENST00000617103 FMNL2Q96PY5 1086 aa12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 GGNBP2Q9H3C7 697 aa12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 CAGE1Q8TC20 777 aa12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 GTF2E1P29083 439 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 PDCL2Q8N4E4 241 aa12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 MVPQ14764 893 aaKnown RBP12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 TMX4Q9H1E5 349 aaPredicted RBP12.74□□□□□ -0.37
CLTCL1-209ENST00000617103 ANKRD50Q9ULJ7 1429 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 ERICH2A1L162 156 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 TAF3Q5VWG9 929 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 CCDC191Q8NCU4 936 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 IGF1RP08069 1367 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 ZNF644Q9H582 1327 aaPredicted RBP12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 AEBP1Q8IUX7 1158 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 SURF6O75683 361 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 TTC5Q8N0Z6 440 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 NOB1Q9ULX3 412 aaKnown RBP12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 TNMDQ9H2S6 317 aa12.73□□□□□ -0.37
CLTCL1-209ENST00000617103 KRT85P78386 507 aa12.72□□□□□ -0.37
CLTCL1-209ENST00000617103 NBPF8Q3BBV2 869 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms