RNA–Protein interactions for RNA: ENST00000616956.1

SEM1-216, Transcript of SEM1, 26S proteasome complex subunit, humanhuman

TSL 3

Gene SEM1, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEM1-216ENST00000616956 RSBN1LQ6PCB5 846 aaPredicted RBP7.66□□□□□ -1.18
SEM1-216ENST00000616956 BRICD5Q6PL45 260 aa7.66□□□□□ -1.18
SEM1-216ENST00000616956 SYMPKQ92797 1274 aaKnown RBP7.66□□□□□ -1.18
SEM1-216ENST00000616956 THAP11Q96EK4 314 aa7.66□□□□□ -1.18
SEM1-216ENST00000616956 POLR3EQ9NVU0 708 aa7.66□□□□□ -1.18
SEM1-216ENST00000616956 SALL2Q9Y467 1007 aaPredicted RBP7.66□□□□□ -1.18
SEM1-216ENST00000616956 USB1Q9BQ65 265 aaKnown RBP7.65□□□□□ -1.18
SEM1-216ENST00000616956 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.65□□□□□ -1.18
SEM1-216ENST00000616956 PCDHGC3Q9UN70 934 aa7.65□□□□□ -1.18
SEM1-216ENST00000616956 PLEKHG3A1L390 1219 aa7.64□□□□□ -1.19
SEM1-216ENST00000616956 SPTLC1O15269 473 aa7.64□□□□□ -1.19
SEM1-216ENST00000616956 CLK2P49760 499 aaKnown RBP7.63□□□□□ -1.19
SEM1-216ENST00000616956 LIMD1Q9UGP4 676 aa7.63□□□□□ -1.19
SEM1-216ENST00000616956 PCDHB15Q9Y5E8 787 aa7.63□□□□□ -1.19
SEM1-216ENST00000616956 NUTM2BA6NNL0 878 aaPredicted RBP7.62□□□□□ -1.19
SEM1-216ENST00000616956 NUTM2EB1AL46 878 aaPredicted RBP7.62□□□□□ -1.19
SEM1-216ENST00000616956 PPEF1O14829 653 aaPredicted RBP7.62□□□□□ -1.19
SEM1-216ENST00000616956 GJA5P36382 358 aa7.62□□□□□ -1.19
SEM1-216ENST00000616956 MTMR2Q13614 643 aa7.62□□□□□ -1.19
SEM1-216ENST00000616956 NUTM2DQ5VT03 806 aaPredicted RBP7.62□□□□□ -1.19
SEM1-216ENST00000616956 RETREG3Q86VR2 466 aa7.62□□□□□ -1.19
SEM1-216ENST00000616956 NUTM2AQ8IVF1 878 aaPredicted RBP7.62□□□□□ -1.19
SEM1-216ENST00000616956 FAM160A2Q8N612 972 aaPredicted RBP7.62□□□□□ -1.19
SEM1-216ENST00000616956 PRDM9Q9NQV7 894 aa7.62□□□□□ -1.19
SEM1-216ENST00000616956 RNF223E7ERA6 249 aa7.61□□□□□ -1.19
SEM1-216ENST00000616956 SKIV2LQ15477 1246 aaKnown RBP7.61□□□□□ -1.19
SEM1-216ENST00000616956 MSS51Q4VC12 460 aa7.61□□□□□ -1.19
SEM1-216ENST00000616956 ZBTB3Q9H5J0 574 aa7.61□□□□□ -1.19
SEM1-216ENST00000616956 SPDYE5A6NIY4 337 aa7.6□□□□□ -1.19
SEM1-216ENST00000616956 SH3D19Q5HYK7 790 aa7.6□□□□□ -1.19
SEM1-216ENST00000616956 CABLES1Q8TDN4 633 aa7.6□□□□□ -1.19
SEM1-216ENST00000616956 HRCP23327 699 aa7.59□□□□□ -1.19
SEM1-216ENST00000616956 QPCTQ16769 361 aa7.59□□□□□ -1.19
SEM1-216ENST00000616956 PRR7Q8TB68 274 aa7.59□□□□□ -1.19
SEM1-216ENST00000616956 TSC1Q92574 1164 aa7.59□□□□□ -1.19
SEM1-216ENST00000616956 PRPF38BQ5VTL8 546 aaKnown RBP7.58□□□□□ -1.2
SEM1-216ENST00000616956 ANKLE1Q8NAG6 615 aa7.58□□□□□ -1.2
SEM1-216ENST00000616956 PROCA1Q8NCQ7 364 aaPredicted RBP7.58□□□□□ -1.2
SEM1-216ENST00000616956 PCMTD1Q96MG8 357 aaPredicted RBP7.58□□□□□ -1.2
SEM1-216ENST00000616956 FCF1Q9Y324 198 aaKnown RBP7.58□□□□□ -1.2
SEM1-216ENST00000616956 TUSC1Q2TAM9 212 aa7.57□□□□□ -1.2
SEM1-216ENST00000616956 LILRB3O75022 631 aa7.56□□□□□ -1.2
SEM1-216ENST00000616956 DXOO77932 396 aaKnown RBP7.56□□□□□ -1.2
SEM1-216ENST00000616956 JUNDP17535 347 aa7.56□□□□□ -1.2
SEM1-216ENST00000616956 MMP16P51512 607 aa7.56□□□□□ -1.2
SEM1-216ENST00000616956 CCDC24Q8N4L8 307 aa7.56□□□□□ -1.2
SEM1-216ENST00000616956 PRKD2Q9BZL6 878 aa7.56□□□□□ -1.2
SEM1-216ENST00000616956 CFAP99D6REC4 459 aa7.55□□□□□ -1.2
SEM1-216ENST00000616956 GOPCQ9HD26 462 aa7.55□□□□□ -1.2
SEM1-216ENST00000616956 RGS20O76081 388 aa7.54□□□□□ -1.2
SEM1-216ENST00000616956 RTL5Q5HYW3 569 aaPredicted RBP7.54□□□□□ -1.2
SEM1-216ENST00000616956 ZBTB24O43167 697 aaPredicted RBP7.53□□□□□ -1.2
SEM1-216ENST00000616956 SLC19A1P41440 591 aa7.53□□□□□ -1.2
SEM1-216ENST00000616956 HELBQ8NG08 1087 aaPredicted RBP7.53□□□□□ -1.2
SEM1-216ENST00000616956 NUDT12Q9BQG2 462 aa7.53□□□□□ -1.2
SEM1-216ENST00000616956 PLA2G2CQ5R387 149 aa7.52□□□□□ -1.21
SEM1-216ENST00000616956 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.52□□□□□ -1.21
SEM1-216ENST00000616956 CCNYL3P0C7X3 344 aa7.51□□□□□ -1.21
SEM1-216ENST00000616956 PTPRNQ16849 979 aa7.51□□□□□ -1.21
SEM1-216ENST00000616956 DESI1Q6ICB0 168 aa7.51□□□□□ -1.21
SEM1-216ENST00000616956 V9GY48 417 aaPredicted RBP7.51□□□□□ -1.21
SEM1-216ENST00000616956 CTHP32929 405 aa7.5□□□□□ -1.21
SEM1-216ENST00000616956 LIAT1Q6ZQX7 453 aa7.5□□□□□ -1.21
SEM1-216ENST00000616956 AP1G2O75843 785 aa7.49□□□□□ -1.21
SEM1-216ENST00000616956 FBXO31Q5XUX0 539 aaPredicted RBP7.49□□□□□ -1.21
SEM1-216ENST00000616956 PPP2R2DQ66LE6 453 aa7.49□□□□□ -1.21
SEM1-216ENST00000616956 LYPD8Q6UX82 237 aa7.49□□□□□ -1.21
SEM1-216ENST00000616956 PER1O15534 1290 aaPredicted RBP7.48□□□□□ -1.21
SEM1-216ENST00000616956 CD2BP2O95400 341 aaKnown RBP7.48□□□□□ -1.21
SEM1-216ENST00000616956 RFC5P40937 340 aa7.48□□□□□ -1.21
SEM1-216ENST00000616956 RPIAP49247 311 aa7.48□□□□□ -1.21
SEM1-216ENST00000616956 SPRYD7Q5W111 196 aa7.48□□□□□ -1.21
SEM1-216ENST00000616956 CTDSPL2Q05D32 466 aa7.47□□□□□ -1.21
SEM1-216ENST00000616956 EMID1Q96A84 441 aaPredicted RBP7.47□□□□□ -1.21
SEM1-216ENST00000616956 KCNH2Q12809 1159 aa7.46□□□□□ -1.22
SEM1-216ENST00000616956 TRIM32Q13049 653 aa7.46□□□□□ -1.22
SEM1-216ENST00000616956 ZNF697Q5TEC3 545 aa7.46□□□□□ -1.22
SEM1-216ENST00000616956 PTCRAQ6ISU1 281 aaPredicted RBP7.46□□□□□ -1.22
SEM1-216ENST00000616956 EVA1BQ9NVM1 165 aa7.46□□□□□ -1.22
SEM1-216ENST00000616956 ZNF598Q86UK7 904 aaKnown RBP7.45□□□□□ -1.22
SEM1-216ENST00000616956 MAP10Q9P2G4 905 aa7.45□□□□□ -1.22
SEM1-216ENST00000616956 TMEM259Q4ZIN3 620 aa7.44□□□□□ -1.22
SEM1-216ENST00000616956 LRRN4Q8WUT4 740 aa7.44□□□□□ -1.22
SEM1-216ENST00000616956 UNC93B1Q9H1C4 597 aa7.44□□□□□ -1.22
SEM1-216ENST00000616956 USP17L8P0C7I0 530 aa7.43□□□□□ -1.22
SEM1-216ENST00000616956 FOXC1Q12948 553 aa7.43□□□□□ -1.22
SEM1-216ENST00000616956 F12P00748 615 aaPredicted RBP7.42□□□□□ -1.22
SEM1-216ENST00000616956 LINC01559Q495D7 138 aa7.42□□□□□ -1.22
SEM1-216ENST00000616956 IRX2Q9BZI1 471 aaPredicted RBP7.42□□□□□ -1.22
SEM1-216ENST00000616956 TMEM132AQ24JP5 1023 aa7.41□□□□□ -1.22
SEM1-216ENST00000616956 PDZRN3Q9UPQ7 1066 aa7.41□□□□□ -1.22
SEM1-216ENST00000616956 TNFRSF10AO00220 468 aa7.4□□□□□ -1.22
SEM1-216ENST00000616956 GFRA3O60609 400 aa7.4□□□□□ -1.22
SEM1-216ENST00000616956 BAP1Q92560 729 aa7.4□□□□□ -1.22
SEM1-216ENST00000616956 WNT7BP56706 349 aa7.39□□□□□ -1.23
SEM1-216ENST00000616956 NR6A1Q15406 480 aa7.39□□□□□ -1.23
SEM1-216ENST00000616956 SH3BP2P78314 561 aa7.38□□□□□ -1.23
SEM1-216ENST00000616956 SKOR1P84550 965 aa7.38□□□□□ -1.23
SEM1-216ENST00000616956 AGERQ15109 404 aa7.38□□□□□ -1.23
SEM1-216ENST00000616956 RC3H1Q5TC82 1133 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms