RNA–Protein interactions for RNA: ENST00000616887.1

PCDHGA9-202, Transcript of protocadherin gamma subfamily A, 9, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGA9, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA9-202ENST00000616887 RIMS1Q86UR5 1692 aaKnown RBP15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 PREX1Q8TCU6 1659 aa15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 MYO5BQ9ULV0 1848 aa15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 EIF5BO60841 1220 aaKnown RBP15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 MYO3AQ8NEV4 1616 aa15.16■□□□□ 0.02
PCDHGA9-202ENST00000616887 VGFO15240 615 aaPredicted RBP15.15■□□□□ 0.02
PCDHGA9-202ENST00000616887 SBNO2Q9Y2G9 1366 aa15.14■□□□□ 0.01
PCDHGA9-202ENST00000616887 QRICH2Q9H0J4 1663 aa15.14■□□□□ 0.01
PCDHGA9-202ENST00000616887 BLMP54132 1417 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA9-202ENST00000616887 PLPPR3Q6T4P5 718 aa15.12■□□□□ 0.01
PCDHGA9-202ENST00000616887 TMEM131LA2VDJ0 1609 aa15.12■□□□□ 0.01
PCDHGA9-202ENST00000616887 TNNT2P45379 298 aaPredicted RBP15.12■□□□□ 0.01
PCDHGA9-202ENST00000616887 NSD3Q9BZ95 1437 aa15.11■□□□□ 0.01
PCDHGA9-202ENST00000616887 CEBPAP49715 358 aaPredicted RBP15.11■□□□□ 0.01
PCDHGA9-202ENST00000616887 CABP2Q9NPB3 220 aa15.11■□□□□ 0.01
PCDHGA9-202ENST00000616887 ZMYM3Q14202 1370 aa15.11■□□□□ 0.01
PCDHGA9-202ENST00000616887 STAG3Q9UJ98 1225 aa15.1■□□□□ 0.01
PCDHGA9-202ENST00000616887 PTPRMP28827 1452 aa15.1■□□□□ 0.01
PCDHGA9-202ENST00000616887 SPATA31D1Q6ZQQ2 1576 aa15.1■□□□□ 0.01
PCDHGA9-202ENST00000616887 CCDC146Q8IYE0 955 aa15.1■□□□□ 0.01
PCDHGA9-202ENST00000616887 TULP4Q9NRJ4 1543 aa15.09■□□□□ 0.01
PCDHGA9-202ENST00000616887 C3P01024 1663 aa15.09■□□□□ 0.01
PCDHGA9-202ENST00000616887 ARHGEF28Q8N1W1 1705 aaKnown RBP15.09■□□□□ 0.01
PCDHGA9-202ENST00000616887 RNF123Q5XPI4 1314 aa15.08■□□□□ 0.01
PCDHGA9-202ENST00000616887 WDR43Q15061 677 aaKnown RBP eCLIP15.08■□□□□ 0
PCDHGA9-202ENST00000616887 IPO9Q96P70 1041 aaKnown RBP15.08■□□□□ 0
PCDHGA9-202ENST00000616887 ZBTB47Q9UFB7 747 aaPredicted RBP15.08■□□□□ 0
PCDHGA9-202ENST00000616887 NPC1L1Q9UHC9 1359 aa15.07■□□□□ 0
PCDHGA9-202ENST00000616887 PLEKHH1Q9ULM0 1364 aa15.07■□□□□ 0
PCDHGA9-202ENST00000616887 ANP32AP39687 249 aaKnown RBP15.07■□□□□ 0
PCDHGA9-202ENST00000616887 MINK1Q8N4C8 1332 aaPredicted RBP15.06■□□□□ 0
PCDHGA9-202ENST00000616887 ZFYVE9O95405 1425 aa15.06■□□□□ 0
PCDHGA9-202ENST00000616887 PRAM1Q96QH2 718 aa15.06■□□□□ 0
PCDHGA9-202ENST00000616887 RCAN3Q9UKA8 241 aa15.04■□□□□ -0
PCDHGA9-202ENST00000616887 EVC2Q86UK5 1308 aa15.04■□□□□ -0
PCDHGA9-202ENST00000616887 SRPK2P78362 688 aaKnown RBP15.03■□□□□ -0
PCDHGA9-202ENST00000616887 YTHDC2Q9H6S0 1430 aaKnown RBP15.03■□□□□ -0
PCDHGA9-202ENST00000616887 A2ML1A8K2U0 1454 aa15.03■□□□□ -0
PCDHGA9-202ENST00000616887 RRP1P56182 461 aaKnown RBP15.02■□□□□ -0
PCDHGA9-202ENST00000616887 PLIN1O60240 522 aa15.02□□□□□ -0.01
PCDHGA9-202ENST00000616887 MORC1Q86VD1 984 aa15.02□□□□□ -0.01
PCDHGA9-202ENST00000616887 POGKQ9P215 609 aa15.01□□□□□ -0.01
PCDHGA9-202ENST00000616887 ALKQ9UM73 1620 aa15.01□□□□□ -0.01
PCDHGA9-202ENST00000616887 APAF1O14727 1248 aa15□□□□□ -0.01
PCDHGA9-202ENST00000616887 PDE3BQ13370 1112 aa15□□□□□ -0.01
PCDHGA9-202ENST00000616887 INSRP06213 1382 aa15□□□□□ -0.01
PCDHGA9-202ENST00000616887 WAPLQ7Z5K2 1190 aa15□□□□□ -0.01
PCDHGA9-202ENST00000616887 RIMS2Q9UQ26 1411 aa14.99□□□□□ -0.01
PCDHGA9-202ENST00000616887 A0A1W2PP64 1363 aa14.99□□□□□ -0.01
PCDHGA9-202ENST00000616887 TNRQ92752 1358 aa14.99□□□□□ -0.01
PCDHGA9-202ENST00000616887 EXOC6Q8TAG9 804 aa14.98□□□□□ -0.01
PCDHGA9-202ENST00000616887 SPINK5Q9NQ38 1064 aaPredicted RBP14.98□□□□□ -0.01
PCDHGA9-202ENST00000616887 ANKRD36BQ8N2N9 1353 aa14.98□□□□□ -0.01
PCDHGA9-202ENST00000616887 DMRT2Q9Y5R5 561 aa14.98□□□□□ -0.01
PCDHGA9-202ENST00000616887 HDGFP51858 240 aaKnown RBP14.97□□□□□ -0.01
PCDHGA9-202ENST00000616887 CGNL1Q0VF96 1302 aa14.97□□□□□ -0.01
PCDHGA9-202ENST00000616887 ZNF521Q96K83 1311 aa14.97□□□□□ -0.01
PCDHGA9-202ENST00000616887 NEFMP07197 916 aa14.96□□□□□ -0.01
PCDHGA9-202ENST00000616887 MTHFSP49914 203 aa14.96□□□□□ -0.01
PCDHGA9-202ENST00000616887 SETD1BQ9UPS6 1966 aaKnown RBP14.96□□□□□ -0.01
PCDHGA9-202ENST00000616887 NLRP1Q9C000 1473 aa14.96□□□□□ -0.01
PCDHGA9-202ENST00000616887 GGNBP2Q9H3C7 697 aa14.96□□□□□ -0.01
PCDHGA9-202ENST00000616887 DUSP27Q5VZP5 1158 aa14.95□□□□□ -0.02
PCDHGA9-202ENST00000616887 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.95□□□□□ -0.02
PCDHGA9-202ENST00000616887 BRPF3Q9ULD4 1205 aa14.95□□□□□ -0.02
PCDHGA9-202ENST00000616887 LAS1LQ9Y4W2 734 aaKnown RBP14.95□□□□□ -0.02
PCDHGA9-202ENST00000616887 PKNOX2Q96KN3 472 aa14.94□□□□□ -0.02
PCDHGA9-202ENST00000616887 CDK19Q9BWU1 502 aa14.94□□□□□ -0.02
PCDHGA9-202ENST00000616887 METP08581 1390 aa14.94□□□□□ -0.02
PCDHGA9-202ENST00000616887 RRP7AQ9Y3A4 280 aaKnown RBP14.94□□□□□ -0.02
PCDHGA9-202ENST00000616887 POLR3AO14802 1390 aaPredicted RBP14.94□□□□□ -0.02
PCDHGA9-202ENST00000616887 NEUROD2Q15784 382 aa14.93□□□□□ -0.02
PCDHGA9-202ENST00000616887 CD163L1Q9NR16 1453 aa14.93□□□□□ -0.02
PCDHGA9-202ENST00000616887 C20orf194Q5TEA3 1177 aa14.93□□□□□ -0.02
PCDHGA9-202ENST00000616887 GOLGA2Q08379 1002 aa14.92□□□□□ -0.02
PCDHGA9-202ENST00000616887 CABP1Q9NZU7 370 aa14.92□□□□□ -0.02
PCDHGA9-202ENST00000616887 SHPRHQ149N8 1683 aa14.91□□□□□ -0.02
PCDHGA9-202ENST00000616887 TXNDC2Q86VQ3 553 aa14.91□□□□□ -0.02
PCDHGA9-202ENST00000616887 NRXN3Q9Y4C0 1643 aa14.91□□□□□ -0.02
PCDHGA9-202ENST00000616887 FBLN1P23142 703 aa14.91□□□□□ -0.02
PCDHGA9-202ENST00000616887 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
PCDHGA9-202ENST00000616887 NCKAP5LQ9HCH0 1330 aa14.91□□□□□ -0.02
PCDHGA9-202ENST00000616887 ABCC11Q96J66 1382 aa14.9□□□□□ -0.02
PCDHGA9-202ENST00000616887 SETD1AO15047 1707 aaKnown RBP14.9□□□□□ -0.02
PCDHGA9-202ENST00000616887 USP32Q8NFA0 1604 aa14.9□□□□□ -0.02
PCDHGA9-202ENST00000616887 ATAD2Q6PL18 1390 aa14.89□□□□□ -0.03
PCDHGA9-202ENST00000616887 SLFN5Q08AF3 891 aa14.89□□□□□ -0.03
PCDHGA9-202ENST00000616887 NPM2Q86SE8 214 aaKnown RBP14.89□□□□□ -0.03
PCDHGA9-202ENST00000616887 CEP170BQ9Y4F5 1589 aaPredicted RBP14.89□□□□□ -0.03
PCDHGA9-202ENST00000616887 FYB1O15117 783 aa14.89□□□□□ -0.03
PCDHGA9-202ENST00000616887 UBR1Q8IWV7 1749 aa14.89□□□□□ -0.03
PCDHGA9-202ENST00000616887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.88□□□□□ -0.03
PCDHGA9-202ENST00000616887 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
PCDHGA9-202ENST00000616887 USP35Q9P2H5 1018 aa14.88□□□□□ -0.03
PCDHGA9-202ENST00000616887 ZNF142P52746 1687 aaPredicted RBP14.88□□□□□ -0.03
PCDHGA9-202ENST00000616887 LMTK3Q96Q04 1460 aa14.87□□□□□ -0.03
PCDHGA9-202ENST00000616887 TMEM2Q9UHN6 1383 aa14.86□□□□□ -0.03
PCDHGA9-202ENST00000616887 SKAP1Q86WV1 359 aa14.86□□□□□ -0.03
PCDHGA9-202ENST00000616887 TERF2IPQ9NYB0 399 aa14.86□□□□□ -0.03
PCDHGA9-202ENST00000616887 LTKP29376 864 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms