RNA–Protein interactions for RNA: ENST00000616706.4

LINC00598-207, long intergenic non-protein coding RNA 598, humanhuman

TSL 1 (best) BASIC

Gene LINC00598, Length 2,088 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-207ENST00000616706 CENPJQ9HC77 1338 aaPredicted RBP13.94□□□□□ -0.18
LINC00598-207ENST00000616706 YTHDC2Q9H6S0 1430 aaKnown RBP13.94□□□□□ -0.18
LINC00598-207ENST00000616706 NCKAP5LQ9HCH0 1330 aa13.94□□□□□ -0.18
LINC00598-207ENST00000616706 QRICH2Q9H0J4 1663 aa13.93□□□□□ -0.18
LINC00598-207ENST00000616706 HSPA2P54652 639 aa13.93□□□□□ -0.18
LINC00598-207ENST00000616706 POGKQ9P215 609 aa13.93□□□□□ -0.18
LINC00598-207ENST00000616706 PRAM1Q96QH2 718 aa13.92□□□□□ -0.18
LINC00598-207ENST00000616706 PPP4R2Q9NY27 417 aa13.92□□□□□ -0.18
LINC00598-207ENST00000616706 ADAMTS13Q76LX8 1427 aa13.92□□□□□ -0.18
LINC00598-207ENST00000616706 TBX22Q9Y458 520 aa13.92□□□□□ -0.18
LINC00598-207ENST00000616706 ASXL1Q8IXJ9 1541 aa13.92□□□□□ -0.18
LINC00598-207ENST00000616706 BLMP54132 1417 aaPredicted RBP13.91□□□□□ -0.18
LINC00598-207ENST00000616706 NRXN3Q9Y4C0 1643 aa13.91□□□□□ -0.18
LINC00598-207ENST00000616706 RNF123Q5XPI4 1314 aa13.91□□□□□ -0.18
LINC00598-207ENST00000616706 WAPLQ7Z5K2 1190 aa13.91□□□□□ -0.18
LINC00598-207ENST00000616706 ZNF142P52746 1687 aaPredicted RBP13.91□□□□□ -0.18
LINC00598-207ENST00000616706 CDCA8Q53HL2 280 aa13.89□□□□□ -0.19
LINC00598-207ENST00000616706 AMOTL2Q9Y2J4 779 aa13.89□□□□□ -0.19
LINC00598-207ENST00000616706 INSRP06213 1382 aa13.89□□□□□ -0.19
LINC00598-207ENST00000616706 ARHGEF28Q8N1W1 1705 aaKnown RBP13.88□□□□□ -0.19
LINC00598-207ENST00000616706 SLC24A1O60721 1099 aa13.88□□□□□ -0.19
LINC00598-207ENST00000616706 ABCC11Q96J66 1382 aa13.88□□□□□ -0.19
LINC00598-207ENST00000616706 MINK1Q8N4C8 1332 aaPredicted RBP13.88□□□□□ -0.19
LINC00598-207ENST00000616706 AMER1Q5JTC6 1135 aaPredicted RBP13.87□□□□□ -0.19
LINC00598-207ENST00000616706 MED14O60244 1454 aa13.87□□□□□ -0.19
LINC00598-207ENST00000616706 KNSTRNQ9Y448 316 aa13.86□□□□□ -0.19
LINC00598-207ENST00000616706 SETD1AO15047 1707 aaKnown RBP13.86□□□□□ -0.19
LINC00598-207ENST00000616706 PLEKHH1Q9ULM0 1364 aa13.86□□□□□ -0.19
LINC00598-207ENST00000616706 SBNO2Q9Y2G9 1366 aa13.86□□□□□ -0.19
LINC00598-207ENST00000616706 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
LINC00598-207ENST00000616706 B4GALNT3Q6L9W6 998 aa13.85□□□□□ -0.19
LINC00598-207ENST00000616706 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
LINC00598-207ENST00000616706 RBM19Q9Y4C8 960 aaKnown RBP13.84□□□□□ -0.19
LINC00598-207ENST00000616706 EVC2Q86UK5 1308 aa13.84□□□□□ -0.19
LINC00598-207ENST00000616706 NPC1L1Q9UHC9 1359 aa13.84□□□□□ -0.19
LINC00598-207ENST00000616706 PPP2R1AP30153 589 aa13.84□□□□□ -0.19
LINC00598-207ENST00000616706 SIRT1Q96EB6 747 aa13.84□□□□□ -0.19
LINC00598-207ENST00000616706 CABP2Q9NPB3 220 aa13.83□□□□□ -0.2
LINC00598-207ENST00000616706 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
LINC00598-207ENST00000616706 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
LINC00598-207ENST00000616706 KCNA6P17658 529 aa13.83□□□□□ -0.2
LINC00598-207ENST00000616706 SRPK2P78362 688 aaKnown RBP13.83□□□□□ -0.2
LINC00598-207ENST00000616706 LMTK3Q96Q04 1460 aa13.82□□□□□ -0.2
LINC00598-207ENST00000616706 CDK19Q9BWU1 502 aa13.81□□□□□ -0.2
LINC00598-207ENST00000616706 DLC1Q96QB1 1528 aa13.8□□□□□ -0.2
LINC00598-207ENST00000616706 PDE3BQ13370 1112 aa13.8□□□□□ -0.2
LINC00598-207ENST00000616706 TECPR2O15040 1411 aa13.8□□□□□ -0.2
LINC00598-207ENST00000616706 USP32Q8NFA0 1604 aa13.8□□□□□ -0.2
LINC00598-207ENST00000616706 RBM33Q96EV2 1170 aaKnown RBP13.79□□□□□ -0.2
LINC00598-207ENST00000616706 PIK3R4Q99570 1358 aa13.79□□□□□ -0.2
LINC00598-207ENST00000616706 FAM135BQ49AJ0 1406 aa13.79□□□□□ -0.2
LINC00598-207ENST00000616706 DIP2AQ14689 1571 aa13.79□□□□□ -0.2
LINC00598-207ENST00000616706 CDCA7LQ96GN5 454 aa13.79□□□□□ -0.2
LINC00598-207ENST00000616706 ADAMTS8Q9UP79 889 aa13.79□□□□□ -0.2
LINC00598-207ENST00000616706 SHPRHQ149N8 1683 aa13.78□□□□□ -0.2
LINC00598-207ENST00000616706 SLC12A5Q9H2X9 1139 aa13.78□□□□□ -0.2
LINC00598-207ENST00000616706 WASLO00401 505 aaPredicted RBP13.78□□□□□ -0.2
LINC00598-207ENST00000616706 TULP4Q9NRJ4 1543 aa13.77□□□□□ -0.2
LINC00598-207ENST00000616706 RRP1P56182 461 aaKnown RBP13.77□□□□□ -0.21
LINC00598-207ENST00000616706 CARD14Q9BXL6 1004 aa13.77□□□□□ -0.21
LINC00598-207ENST00000616706 RCAN3Q9UKA8 241 aa13.76□□□□□ -0.21
LINC00598-207ENST00000616706 PUS7Q96PZ0 661 aaKnown RBP13.76□□□□□ -0.21
LINC00598-207ENST00000616706 CPS1P31327 1500 aa13.76□□□□□ -0.21
LINC00598-207ENST00000616706 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
LINC00598-207ENST00000616706 KNDC1Q76NI1 1749 aa13.75□□□□□ -0.21
LINC00598-207ENST00000616706 WDR43Q15061 677 aaKnown RBP eCLIP13.74□□□□□ -0.21
LINC00598-207ENST00000616706 PROSER2Q86WR7 435 aaPredicted RBP13.74□□□□□ -0.21
LINC00598-207ENST00000616706 PTCH1Q13635 1447 aa13.73□□□□□ -0.21
LINC00598-207ENST00000616706 NSD3Q9BZ95 1437 aa13.73□□□□□ -0.21
LINC00598-207ENST00000616706 CABP1Q9NZU7 370 aa13.73□□□□□ -0.21
LINC00598-207ENST00000616706 C14orf37Q86TY3 774 aa13.73□□□□□ -0.21
LINC00598-207ENST00000616706 NUDT16Q96DE0 195 aaKnown RBP13.73□□□□□ -0.21
LINC00598-207ENST00000616706 CCDC136Q96JN2 1154 aa13.72□□□□□ -0.21
LINC00598-207ENST00000616706 CHD2O14647 1828 aaKnown RBP13.72□□□□□ -0.21
LINC00598-207ENST00000616706 ATAD2Q6PL18 1390 aa13.71□□□□□ -0.21
LINC00598-207ENST00000616706 XRN1Q8IZH2 1706 aaKnown RBP13.71□□□□□ -0.22
LINC00598-207ENST00000616706 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.71□□□□□ -0.22
LINC00598-207ENST00000616706 ZNF521Q96K83 1311 aa13.71□□□□□ -0.22
LINC00598-207ENST00000616706 ANKRD26Q9UPS8 1709 aa13.7□□□□□ -0.22
LINC00598-207ENST00000616706 STRCQ7RTU9 1775 aa13.7□□□□□ -0.22
LINC00598-207ENST00000616706 CCDC61Q9Y6R9 512 aa13.7□□□□□ -0.22
LINC00598-207ENST00000616706 EXOC6Q8TAG9 804 aa13.69□□□□□ -0.22
LINC00598-207ENST00000616706 DMRT2Q9Y5R5 561 aa13.68□□□□□ -0.22
LINC00598-207ENST00000616706 PRR36Q9H6K5 1346 aa13.68□□□□□ -0.22
LINC00598-207ENST00000616706 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
LINC00598-207ENST00000616706 POLR3AO14802 1390 aaPredicted RBP13.67□□□□□ -0.22
LINC00598-207ENST00000616706 HDGFL2Q7Z4V5 671 aaPredicted RBP13.67□□□□□ -0.22
LINC00598-207ENST00000616706 CCDC146Q8IYE0 955 aa13.67□□□□□ -0.22
LINC00598-207ENST00000616706 AEBP2Q6ZN18 517 aaPredicted RBP13.67□□□□□ -0.22
LINC00598-207ENST00000616706 ZNF335Q9H4Z2 1342 aaPredicted RBP13.66□□□□□ -0.22
LINC00598-207ENST00000616706 DUSP27Q5VZP5 1158 aa13.66□□□□□ -0.22
LINC00598-207ENST00000616706 PPIP5K1Q6PFW1 1433 aa13.66□□□□□ -0.22
LINC00598-207ENST00000616706 FANCIQ9NVI1 1328 aa13.65□□□□□ -0.22
LINC00598-207ENST00000616706 ANKRD36BQ8N2N9 1353 aa13.65□□□□□ -0.22
LINC00598-207ENST00000616706 NINLQ9Y2I6 1382 aa13.65□□□□□ -0.22
LINC00598-207ENST00000616706 PLIN1O60240 522 aa13.65□□□□□ -0.22
LINC00598-207ENST00000616706 PMFBP1Q8TBY8 1022 aa13.65□□□□□ -0.22
LINC00598-207ENST00000616706 A0A1W2PP64 1363 aa13.65□□□□□ -0.22
LINC00598-207ENST00000616706 KIF20BQ96Q89 1820 aa13.64□□□□□ -0.23
LINC00598-207ENST00000616706 TMEM94Q12767 1356 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms