RNA–Protein interactions for RNA: ENST00000616253.1

AL353770.3-201, humanhuman

TSL 1 (best) BASIC

Gene AL353770.3, Length 1,988 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AL353770.3-201ENST00000616253 METP08581 1390 aa13.55□□□□□ -0.24
AL353770.3-201ENST00000616253 PUS7Q96PZ0 661 aaKnown RBP13.55□□□□□ -0.24
AL353770.3-201ENST00000616253 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
AL353770.3-201ENST00000616253 CARD14Q9BXL6 1004 aa13.54□□□□□ -0.24
AL353770.3-201ENST00000616253 SLIT1O75093 1534 aa13.54□□□□□ -0.24
AL353770.3-201ENST00000616253 SLC12A5Q9H2X9 1139 aa13.54□□□□□ -0.24
AL353770.3-201ENST00000616253 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
AL353770.3-201ENST00000616253 ABCC11Q96J66 1382 aa13.53□□□□□ -0.24
AL353770.3-201ENST00000616253 NSD3Q9BZ95 1437 aa13.53□□□□□ -0.24
AL353770.3-201ENST00000616253 ARHGAP23Q9P227 1491 aa13.53□□□□□ -0.24
AL353770.3-201ENST00000616253 BCANQ96GW7 911 aa13.53□□□□□ -0.24
AL353770.3-201ENST00000616253 USP32Q8NFA0 1604 aa13.53□□□□□ -0.24
AL353770.3-201ENST00000616253 PLEKHG1Q9ULL1 1385 aa13.53□□□□□ -0.24
AL353770.3-201ENST00000616253 ZBED9Q6R2W3 1325 aa13.52□□□□□ -0.24
AL353770.3-201ENST00000616253 ADAMTS13Q76LX8 1427 aa13.52□□□□□ -0.24
AL353770.3-201ENST00000616253 LTKP29376 864 aa13.52□□□□□ -0.25
AL353770.3-201ENST00000616253 SRPK2P78362 688 aaKnown RBP13.52□□□□□ -0.25
AL353770.3-201ENST00000616253 PLEKHH1Q9ULM0 1364 aa13.52□□□□□ -0.25
AL353770.3-201ENST00000616253 CPS1P31327 1500 aa13.52□□□□□ -0.25
AL353770.3-201ENST00000616253 CERKQ8TCT0 537 aa13.51□□□□□ -0.25
AL353770.3-201ENST00000616253 CEP170BQ9Y4F5 1589 aaPredicted RBP13.51□□□□□ -0.25
AL353770.3-201ENST00000616253 PPP2R1AP30153 589 aa13.51□□□□□ -0.25
AL353770.3-201ENST00000616253 WAPLQ7Z5K2 1190 aa13.51□□□□□ -0.25
AL353770.3-201ENST00000616253 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
AL353770.3-201ENST00000616253 ATAD2Q6PL18 1390 aa13.5□□□□□ -0.25
AL353770.3-201ENST00000616253 ANKRD36BQ8N2N9 1353 aa13.5□□□□□ -0.25
AL353770.3-201ENST00000616253 NINLQ9Y2I6 1382 aa13.5□□□□□ -0.25
AL353770.3-201ENST00000616253 TECPR2O15040 1411 aa13.5□□□□□ -0.25
AL353770.3-201ENST00000616253 EID1Q9Y6B2 187 aa13.49□□□□□ -0.25
AL353770.3-201ENST00000616253 MED14O60244 1454 aa13.48□□□□□ -0.25
AL353770.3-201ENST00000616253 FAM135BQ49AJ0 1406 aa13.48□□□□□ -0.25
AL353770.3-201ENST00000616253 THEMISQ8N1K5 641 aaPredicted RBP13.48□□□□□ -0.25
AL353770.3-201ENST00000616253 DMRT2Q9Y5R5 561 aa13.48□□□□□ -0.25
AL353770.3-201ENST00000616253 ZNF142P52746 1687 aaPredicted RBP13.48□□□□□ -0.25
AL353770.3-201ENST00000616253 CDK19Q9BWU1 502 aa13.47□□□□□ -0.25
AL353770.3-201ENST00000616253 A0A1W2PP64 1363 aa13.47□□□□□ -0.25
AL353770.3-201ENST00000616253 DIP2AQ14689 1571 aa13.46□□□□□ -0.26
AL353770.3-201ENST00000616253 CGNL1Q0VF96 1302 aa13.46□□□□□ -0.26
AL353770.3-201ENST00000616253 CD163L1Q9NR16 1453 aa13.45□□□□□ -0.26
AL353770.3-201ENST00000616253 SIRT1Q96EB6 747 aa13.45□□□□□ -0.26
AL353770.3-201ENST00000616253 ROBO2Q9HCK4 1378 aa13.45□□□□□ -0.26
AL353770.3-201ENST00000616253 BLMP54132 1417 aaPredicted RBP13.44□□□□□ -0.26
AL353770.3-201ENST00000616253 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
AL353770.3-201ENST00000616253 SETD1BQ9UPS6 1966 aaKnown RBP13.44□□□□□ -0.26
AL353770.3-201ENST00000616253 PTPRUQ92729 1446 aa13.44□□□□□ -0.26
AL353770.3-201ENST00000616253 SENP3-EIF4A1A0A087X0R7 540 aa13.43□□□□□ -0.26
AL353770.3-201ENST00000616253 NSD2O96028 1365 aa13.43□□□□□ -0.26
AL353770.3-201ENST00000616253 INSRP06213 1382 aa13.43□□□□□ -0.26
AL353770.3-201ENST00000616253 ANKRD26Q9UPS8 1709 aa13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 MORC1Q86VD1 984 aa13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 TERF2IPQ9NYB0 399 aa13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 ADGRB2O60241 1585 aa13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 ATP7BP35670 1465 aa13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
AL353770.3-201ENST00000616253 WASLO00401 505 aaPredicted RBP13.41□□□□□ -0.26
AL353770.3-201ENST00000616253 HSPA2P54652 639 aa13.41□□□□□ -0.26
AL353770.3-201ENST00000616253 KIF20BQ96Q89 1820 aa13.41□□□□□ -0.26
AL353770.3-201ENST00000616253 CABP1Q9NZU7 370 aa13.41□□□□□ -0.26
AL353770.3-201ENST00000616253 TBX22Q9Y458 520 aa13.41□□□□□ -0.26
AL353770.3-201ENST00000616253 WDR43Q15061 677 aaKnown RBP eCLIP13.4□□□□□ -0.26
AL353770.3-201ENST00000616253 HDGFL2Q7Z4V5 671 aaPredicted RBP13.4□□□□□ -0.26
AL353770.3-201ENST00000616253 XRN1Q8IZH2 1706 aaKnown RBP13.4□□□□□ -0.26
AL353770.3-201ENST00000616253 TNNT2P45379 298 aaPredicted RBP13.4□□□□□ -0.27
AL353770.3-201ENST00000616253 SUPT16HQ9Y5B9 1047 aaKnown RBP13.4□□□□□ -0.27
AL353770.3-201ENST00000616253 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
AL353770.3-201ENST00000616253 PPIP5K1Q6PFW1 1433 aa13.39□□□□□ -0.27
AL353770.3-201ENST00000616253 ADAMTS8Q9UP79 889 aa13.39□□□□□ -0.27
AL353770.3-201ENST00000616253 SMG6Q86US8 1419 aaKnown RBP13.38□□□□□ -0.27
AL353770.3-201ENST00000616253 SOCS7O14512 581 aa13.38□□□□□ -0.27
AL353770.3-201ENST00000616253 AMOTL2Q9Y2J4 779 aa13.38□□□□□ -0.27
AL353770.3-201ENST00000616253 ITSN1Q15811 1721 aa13.38□□□□□ -0.27
AL353770.3-201ENST00000616253 CDC42BPGQ6DT37 1551 aa13.38□□□□□ -0.27
AL353770.3-201ENST00000616253 POLR3AO14802 1390 aaPredicted RBP13.37□□□□□ -0.27
AL353770.3-201ENST00000616253 SHPRHQ149N8 1683 aa13.37□□□□□ -0.27
AL353770.3-201ENST00000616253 NEFLP07196 543 aa13.37□□□□□ -0.27
AL353770.3-201ENST00000616253 AKAP12Q02952 1782 aa13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 NUDT16Q96DE0 195 aaKnown RBP13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 MON2Q7Z3U7 1717 aa13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 FKBP8Q14318 412 aa13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 ANKLE2Q86XL3 938 aa13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 GGNBP2Q9H3C7 697 aa13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 SALL2Q9Y467 1007 aaPredicted RBP13.36□□□□□ -0.27
AL353770.3-201ENST00000616253 NUDCQ9Y266 331 aa13.35□□□□□ -0.27
AL353770.3-201ENST00000616253 CPSF1Q10570 1443 aaKnown RBP13.35□□□□□ -0.27
AL353770.3-201ENST00000616253 FYB1O15117 783 aa13.34□□□□□ -0.27
AL353770.3-201ENST00000616253 PRR36Q9H6K5 1346 aa13.34□□□□□ -0.27
AL353770.3-201ENST00000616253 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
AL353770.3-201ENST00000616253 MYT1Q01538 1121 aa13.34□□□□□ -0.27
AL353770.3-201ENST00000616253 CCDC61Q9Y6R9 512 aa13.34□□□□□ -0.27
AL353770.3-201ENST00000616253 NCKAP5LQ9HCH0 1330 aa13.34□□□□□ -0.27
AL353770.3-201ENST00000616253 CHD2O14647 1828 aaKnown RBP13.33□□□□□ -0.28
AL353770.3-201ENST00000616253 EDC4Q6P2E9 1401 aaKnown RBP13.33□□□□□ -0.28
AL353770.3-201ENST00000616253 MTHFSP49914 203 aa13.33□□□□□ -0.28
AL353770.3-201ENST00000616253 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.32□□□□□ -0.28
AL353770.3-201ENST00000616253 KCNA6P17658 529 aa13.31□□□□□ -0.28
AL353770.3-201ENST00000616253 CFAP53Q96M91 514 aa13.31□□□□□ -0.28
AL353770.3-201ENST00000616253 CCDC146Q8IYE0 955 aa13.31□□□□□ -0.28
AL353770.3-201ENST00000616253 STRCQ7RTU9 1775 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms