RNA–Protein interactions for RNA: ENST00000616003.4

MID1-212, Transcript of midline 1, humanhuman

TSL 1 (best) BASIC

Gene MID1, Length 1,926 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MID1-212ENST00000616003 TMED8Q6PL24 325 aaPredicted RBP10.09□□□□□ -0.79
MID1-212ENST00000616003 FRAT1Q92837 279 aaPredicted RBP10.09□□□□□ -0.79
MID1-212ENST00000616003 ADAMTS8Q9UP79 889 aa10.09□□□□□ -0.79
MID1-212ENST00000616003 SHROOM2Q13796 1616 aa10.09□□□□□ -0.79
MID1-212ENST00000616003 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP10.09□□□□□ -0.79
MID1-212ENST00000616003 PPP2R1AP30153 589 aa10.09□□□□□ -0.79
MID1-212ENST00000616003 PLCD4Q9BRC7 762 aa10.09□□□□□ -0.79
MID1-212ENST00000616003 NEURL4Q96JN8 1562 aa10.09□□□□□ -0.79
MID1-212ENST00000616003 ZMYM3Q14202 1370 aa10.08□□□□□ -0.8
MID1-212ENST00000616003 NLRP1Q9C000 1473 aa10.08□□□□□ -0.8
MID1-212ENST00000616003 RGL3Q3MIN7 710 aa10.07□□□□□ -0.8
MID1-212ENST00000616003 KNSTRNQ9Y448 316 aa10.07□□□□□ -0.8
MID1-212ENST00000616003 SLFN5Q08AF3 891 aa10.07□□□□□ -0.8
MID1-212ENST00000616003 CDCA8Q53HL2 280 aa10.07□□□□□ -0.8
MID1-212ENST00000616003 TRMT2AQ8IZ69 625 aaKnown RBP10.07□□□□□ -0.8
MID1-212ENST00000616003 DEPDC5O75140 1603 aa10.07□□□□□ -0.8
MID1-212ENST00000616003 NGEFQ8N5V2 710 aa10.06□□□□□ -0.8
MID1-212ENST00000616003 MAPK8IP3Q9UPT6 1336 aa10.06□□□□□ -0.8
MID1-212ENST00000616003 ABCC1P33527 1531 aa10.06□□□□□ -0.8
MID1-212ENST00000616003 CLTCL1P53675 1640 aa10.06□□□□□ -0.8
MID1-212ENST00000616003 NPM1P06748 294 aaKnown RBP eCLIP10.05□□□□□ -0.8
MID1-212ENST00000616003 SLC4A3P48751 1232 aa10.05□□□□□ -0.8
MID1-212ENST00000616003 GRIPAP1Q4V328 841 aa10.05□□□□□ -0.8
MID1-212ENST00000616003 MYO3AQ8NEV4 1616 aa10.05□□□□□ -0.8
MID1-212ENST00000616003 CGNL1Q0VF96 1302 aa10.04□□□□□ -0.8
MID1-212ENST00000616003 TET3O43151 1660 aa10.04□□□□□ -0.8
MID1-212ENST00000616003 PTMSP20962 102 aa10.04□□□□□ -0.8
MID1-212ENST00000616003 E9PSI1 815 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 RRP9O43818 475 aaKnown RBP10.03□□□□□ -0.8
MID1-212ENST00000616003 FRAT2O75474 233 aaPredicted RBP10.03□□□□□ -0.8
MID1-212ENST00000616003 PTMAP06454 111 aaKnown RBP10.03□□□□□ -0.8
MID1-212ENST00000616003 FAM43AQ8N2R8 423 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 STAC3Q96MF2 364 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 RGS3P49796 1198 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 KCNG1Q9UIX4 513 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 PTPRTO14522 1441 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 USP19O94966 1318 aa10.03□□□□□ -0.8
MID1-212ENST00000616003 SHPRHQ149N8 1683 aa10.02□□□□□ -0.8
MID1-212ENST00000616003 MYOM2P54296 1465 aa10.02□□□□□ -0.81
MID1-212ENST00000616003 IQSEC2Q5JU85 1478 aa10.02□□□□□ -0.81
MID1-212ENST00000616003 ZFYVE16Q7Z3T8 1539 aa10.02□□□□□ -0.81
MID1-212ENST00000616003 PDE3AQ14432 1141 aa10.01□□□□□ -0.81
MID1-212ENST00000616003 ABCA6Q8N139 1617 aa10.01□□□□□ -0.81
MID1-212ENST00000616003 MAP3K4Q9Y6R4 1608 aa10.01□□□□□ -0.81
MID1-212ENST00000616003 MCCP23508 829 aa10.01□□□□□ -0.81
MID1-212ENST00000616003 BECN1Q14457 450 aa10.01□□□□□ -0.81
MID1-212ENST00000616003 CERS3Q8IU89 383 aa10.01□□□□□ -0.81
MID1-212ENST00000616003 IFT172Q9UG01 1749 aa10□□□□□ -0.81
MID1-212ENST00000616003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10□□□□□ -0.81
MID1-212ENST00000616003 VWDEQ8N2E2 1590 aa10□□□□□ -0.81
MID1-212ENST00000616003 USP32Q8NFA0 1604 aa10□□□□□ -0.81
MID1-212ENST00000616003 ERVK-7P63135 1459 aa10□□□□□ -0.81
MID1-212ENST00000616003 FBLN2P98095 1184 aa9.99□□□□□ -0.81
MID1-212ENST00000616003 SP7Q8TDD2 431 aaPredicted RBP9.99□□□□□ -0.81
MID1-212ENST00000616003 CLUAP1Q96AJ1 413 aa9.99□□□□□ -0.81
MID1-212ENST00000616003 ARAP3Q8WWN8 1544 aa9.99□□□□□ -0.81
MID1-212ENST00000616003 CENPJQ9HC77 1338 aaPredicted RBP9.99□□□□□ -0.81
MID1-212ENST00000616003 POLR3AO14802 1390 aaPredicted RBP9.99□□□□□ -0.81
MID1-212ENST00000616003 ZC3H13Q5T200 1668 aaKnown RBP9.98□□□□□ -0.81
MID1-212ENST00000616003 SBNO2Q9Y2G9 1366 aa9.98□□□□□ -0.81
MID1-212ENST00000616003 INO80Q9ULG1 1556 aaPredicted RBP9.98□□□□□ -0.81
MID1-212ENST00000616003 APAF1O14727 1248 aa9.97□□□□□ -0.81
MID1-212ENST00000616003 SETQ01105 290 aaPredicted RBP9.97□□□□□ -0.81
MID1-212ENST00000616003 HSP90AA2PQ14568 343 aaPredicted RBP9.97□□□□□ -0.81
MID1-212ENST00000616003 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
MID1-212ENST00000616003 RTEL1-TNFRSF6BF6WH68 1400 aa9.97□□□□□ -0.81
MID1-212ENST00000616003 BCAR3O75815 825 aa9.97□□□□□ -0.81
MID1-212ENST00000616003 L1TD1Q5T7N2 865 aaKnown RBP9.97□□□□□ -0.81
MID1-212ENST00000616003 CCDC146Q8IYE0 955 aa9.97□□□□□ -0.81
MID1-212ENST00000616003 PLCH2O75038 1416 aa9.97□□□□□ -0.81
MID1-212ENST00000616003 CHD1O14646 1710 aa9.96□□□□□ -0.81
MID1-212ENST00000616003 IGHDP01880 384 aa9.96□□□□□ -0.81
MID1-212ENST00000616003 FAM193AP78312 1265 aa9.96□□□□□ -0.81
MID1-212ENST00000616003 SETBP1Q9Y6X0 1596 aa9.96□□□□□ -0.82
MID1-212ENST00000616003 CALD1Q05682 793 aaKnown RBP9.95□□□□□ -0.82
MID1-212ENST00000616003 CC2D2BQ6DHV5 1058 aa9.95□□□□□ -0.82
MID1-212ENST00000616003 UPF2Q9HAU5 1272 aaKnown RBP9.95□□□□□ -0.82
MID1-212ENST00000616003 PRDM16Q9HAZ2 1276 aa9.95□□□□□ -0.82
MID1-212ENST00000616003 ZCCHC11Q5TAX3 1644 aaKnown RBP9.95□□□□□ -0.82
MID1-212ENST00000616003 NRXN1Q9ULB1 1477 aa9.95□□□□□ -0.82
MID1-212ENST00000616003 FAM43BQ6ZT52 329 aaPredicted RBP9.95□□□□□ -0.82
MID1-212ENST00000616003 PMFBP1Q8TBY8 1022 aa9.95□□□□□ -0.82
MID1-212ENST00000616003 ANTXR1Q9H6X2 564 aa9.95□□□□□ -0.82
MID1-212ENST00000616003 POGKQ9P215 609 aa9.95□□□□□ -0.82
MID1-212ENST00000616003 ADGRL1O94910 1474 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 KIF1BO60333 1816 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 TBC1D32Q96NH3 1257 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 PRDM4Q9UKN5 801 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 ADGRB2O60241 1585 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 TRAPPC8Q9Y2L5 1435 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 KANK1Q14678 1352 aa9.94□□□□□ -0.82
MID1-212ENST00000616003 CWC22Q9HCG8 908 aaKnown RBP9.94□□□□□ -0.82
MID1-212ENST00000616003 EFCAB6Q5THR3 1501 aa9.93□□□□□ -0.82
MID1-212ENST00000616003 MROH2AA6NES4 1674 aa9.93□□□□□ -0.82
MID1-212ENST00000616003 MROH1Q8NDA8 1641 aa9.93□□□□□ -0.82
MID1-212ENST00000616003 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
MID1-212ENST00000616003 ZNF526Q8TF50 670 aaPredicted RBP9.93□□□□□ -0.82
MID1-212ENST00000616003 DMRT2Q9Y5R5 561 aa9.93□□□□□ -0.82
MID1-212ENST00000616003 ATP7AQ04656 1500 aa9.92□□□□□ -0.82
MID1-212ENST00000616003 QRICH2Q9H0J4 1663 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 230.4 ms