RNA–Protein interactions for RNA: ENST00000615335.4

FOXN3-219, Transcript of forkhead box N3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FOXN3, Length 2,421 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-219ENST00000615335 ARHGEF28Q8N1W1 1705 aaKnown RBP17.56■□□□□ 0.4
FOXN3-219ENST00000615335 DIP2AQ14689 1571 aa17.56■□□□□ 0.4
FOXN3-219ENST00000615335 RTL5Q5HYW3 569 aaPredicted RBP17.56■□□□□ 0.4
FOXN3-219ENST00000615335 POLR3GLQ9BT43 218 aa17.56■□□□□ 0.4
FOXN3-219ENST00000615335 SAFB2Q14151 953 aaKnown RBP eCLIP17.55■□□□□ 0.4
FOXN3-219ENST00000615335 POGKQ9P215 609 aa17.55■□□□□ 0.4
FOXN3-219ENST00000615335 CCDC7Q96M83 1385 aa17.55■□□□□ 0.4
FOXN3-219ENST00000615335 PRAM1Q96QH2 718 aa17.55■□□□□ 0.4
FOXN3-219ENST00000615335 ABCC11Q96J66 1382 aa17.54■□□□□ 0.4
FOXN3-219ENST00000615335 TMF1P82094 1093 aa17.54■□□□□ 0.4
FOXN3-219ENST00000615335 PKNOX2Q96KN3 472 aa17.53■□□□□ 0.4
FOXN3-219ENST00000615335 KIF7Q2M1P5 1343 aa17.53■□□□□ 0.4
FOXN3-219ENST00000615335 AMOTL2Q9Y2J4 779 aa17.52■□□□□ 0.4
FOXN3-219ENST00000615335 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
FOXN3-219ENST00000615335 QRICH2Q9H0J4 1663 aa17.52■□□□□ 0.39
FOXN3-219ENST00000615335 SLC24A1O60721 1099 aa17.51■□□□□ 0.39
FOXN3-219ENST00000615335 PTPRUQ92729 1446 aa17.51■□□□□ 0.39
FOXN3-219ENST00000615335 NBR1Q14596 966 aa17.51■□□□□ 0.39
FOXN3-219ENST00000615335 IL27Q8NEV9 243 aa17.51■□□□□ 0.39
FOXN3-219ENST00000615335 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.51■□□□□ 0.39
FOXN3-219ENST00000615335 DISP3Q9P2K9 1392 aa17.51■□□□□ 0.39
FOXN3-219ENST00000615335 DLC1Q96QB1 1528 aa17.5■□□□□ 0.39
FOXN3-219ENST00000615335 PIK3R4Q99570 1358 aa17.49■□□□□ 0.39
FOXN3-219ENST00000615335 KNDC1Q76NI1 1749 aa17.49■□□□□ 0.39
FOXN3-219ENST00000615335 TECPR2O15040 1411 aa17.49■□□□□ 0.39
FOXN3-219ENST00000615335 SBNO2Q9Y2G9 1366 aa17.48■□□□□ 0.39
FOXN3-219ENST00000615335 PRKRIP1Q9H875 184 aaPredicted RBP17.48■□□□□ 0.39
FOXN3-219ENST00000615335 PLEKHH1Q9ULM0 1364 aa17.48■□□□□ 0.39
FOXN3-219ENST00000615335 MINK1Q8N4C8 1332 aaPredicted RBP17.47■□□□□ 0.39
FOXN3-219ENST00000615335 ROBO2Q9HCK4 1378 aa17.47■□□□□ 0.39
FOXN3-219ENST00000615335 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
FOXN3-219ENST00000615335 STRCQ7RTU9 1775 aa17.47■□□□□ 0.39
FOXN3-219ENST00000615335 CCDC184Q52MB2 194 aa17.47■□□□□ 0.39
FOXN3-219ENST00000615335 CDCA8Q53HL2 280 aa17.47■□□□□ 0.39
FOXN3-219ENST00000615335 CPS1P31327 1500 aa17.46■□□□□ 0.39
FOXN3-219ENST00000615335 FAM135BQ49AJ0 1406 aa17.46■□□□□ 0.39
FOXN3-219ENST00000615335 KCNA6P17658 529 aa17.46■□□□□ 0.39
FOXN3-219ENST00000615335 CHD2O14647 1828 aaKnown RBP17.46■□□□□ 0.39
FOXN3-219ENST00000615335 EVC2Q86UK5 1308 aa17.44■□□□□ 0.38
FOXN3-219ENST00000615335 XRN1Q8IZH2 1706 aaKnown RBP17.43■□□□□ 0.38
FOXN3-219ENST00000615335 MRS2Q9HD23 443 aa17.43■□□□□ 0.38
FOXN3-219ENST00000615335 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
FOXN3-219ENST00000615335 SRPK2P78362 688 aaKnown RBP17.41■□□□□ 0.38
FOXN3-219ENST00000615335 FAM9BQ8IZU0 186 aa17.41■□□□□ 0.38
FOXN3-219ENST00000615335 TULP4Q9NRJ4 1543 aa17.4■□□□□ 0.38
FOXN3-219ENST00000615335 IRX6P78412 446 aaPredicted RBP17.4■□□□□ 0.38
FOXN3-219ENST00000615335 CABP2Q9NPB3 220 aa17.4■□□□□ 0.38
FOXN3-219ENST00000615335 RTN4Q9NQC3 1192 aaKnown RBP17.4■□□□□ 0.38
FOXN3-219ENST00000615335 CDK19Q9BWU1 502 aa17.39■□□□□ 0.37
FOXN3-219ENST00000615335 AEBP2Q6ZN18 517 aaPredicted RBP17.39■□□□□ 0.37
FOXN3-219ENST00000615335 PPP4R2Q9NY27 417 aa17.39■□□□□ 0.37
FOXN3-219ENST00000615335 RBM33Q96EV2 1170 aaKnown RBP17.38■□□□□ 0.37
FOXN3-219ENST00000615335 DMRT2Q9Y5R5 561 aa17.38■□□□□ 0.37
FOXN3-219ENST00000615335 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.38■□□□□ 0.37
FOXN3-219ENST00000615335 ZBED9Q6R2W3 1325 aa17.37■□□□□ 0.37
FOXN3-219ENST00000615335 WASLO00401 505 aaPredicted RBP17.37■□□□□ 0.37
FOXN3-219ENST00000615335 TMC1Q8TDI8 760 aa17.36■□□□□ 0.37
FOXN3-219ENST00000615335 NWD1Q149M9 1564 aa17.36■□□□□ 0.37
FOXN3-219ENST00000615335 PAK3O75914 559 aaPredicted RBP17.36■□□□□ 0.37
FOXN3-219ENST00000615335 PROSER2Q86WR7 435 aaPredicted RBP17.35■□□□□ 0.37
FOXN3-219ENST00000615335 PUS7Q96PZ0 661 aaKnown RBP17.35■□□□□ 0.37
FOXN3-219ENST00000615335 DAXXQ9UER7 740 aaPredicted RBP17.35■□□□□ 0.37
FOXN3-219ENST00000615335 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
FOXN3-219ENST00000615335 PANK3Q9H999 370 aa17.33■□□□□ 0.36
FOXN3-219ENST00000615335 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
FOXN3-219ENST00000615335 STRCP1A6NGW2 1772 aa17.32■□□□□ 0.36
FOXN3-219ENST00000615335 MYOM1P52179 1685 aa17.32■□□□□ 0.36
FOXN3-219ENST00000615335 NKTRP30414 1462 aaKnown RBP17.32■□□□□ 0.36
FOXN3-219ENST00000615335 GLIPR1L2Q4G1C9 344 aa17.32■□□□□ 0.36
FOXN3-219ENST00000615335 SLC12A5Q9H2X9 1139 aa17.32■□□□□ 0.36
FOXN3-219ENST00000615335 ATAD2Q6PL18 1390 aa17.32■□□□□ 0.36
FOXN3-219ENST00000615335 ADGRB2O60241 1585 aa17.31■□□□□ 0.36
FOXN3-219ENST00000615335 NUTM2FA1L443 756 aa17.31■□□□□ 0.36
FOXN3-219ENST00000615335 IPO9Q96P70 1041 aaKnown RBP17.31■□□□□ 0.36
FOXN3-219ENST00000615335 ZNF335Q9H4Z2 1342 aaPredicted RBP17.31■□□□□ 0.36
FOXN3-219ENST00000615335 ANP32AP39687 249 aaKnown RBP17.31■□□□□ 0.36
FOXN3-219ENST00000615335 NUDT16Q96DE0 195 aaKnown RBP17.29■□□□□ 0.36
FOXN3-219ENST00000615335 RSPH6AQ9H0K4 717 aa17.29■□□□□ 0.36
FOXN3-219ENST00000615335 NALCNQ8IZF0 1738 aa17.29■□□□□ 0.36
FOXN3-219ENST00000615335 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
FOXN3-219ENST00000615335 CABP1Q9NZU7 370 aa17.28■□□□□ 0.36
FOXN3-219ENST00000615335 ZBTB47Q9UFB7 747 aaPredicted RBP17.28■□□□□ 0.36
FOXN3-219ENST00000615335 TMEM94Q12767 1356 aa17.27■□□□□ 0.36
FOXN3-219ENST00000615335 ADGRL3Q9HAR2 1447 aa17.27■□□□□ 0.36
FOXN3-219ENST00000615335 CCDC61Q9Y6R9 512 aa17.27■□□□□ 0.35
FOXN3-219ENST00000615335 NINLQ9Y2I6 1382 aa17.26■□□□□ 0.35
FOXN3-219ENST00000615335 PER1O15534 1290 aaPredicted RBP17.26■□□□□ 0.35
FOXN3-219ENST00000615335 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
FOXN3-219ENST00000615335 KNSTRNQ9Y448 316 aa17.25■□□□□ 0.35
FOXN3-219ENST00000615335 PPIP5K1Q6PFW1 1433 aa17.25■□□□□ 0.35
FOXN3-219ENST00000615335 C19orf44Q9H6X5 657 aa17.25■□□□□ 0.35
FOXN3-219ENST00000615335 ATP7BP35670 1465 aa17.24■□□□□ 0.35
FOXN3-219ENST00000615335 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
FOXN3-219ENST00000615335 CDC42BPGQ6DT37 1551 aa17.23■□□□□ 0.35
FOXN3-219ENST00000615335 ANKRD36BQ8N2N9 1353 aa17.23■□□□□ 0.35
FOXN3-219ENST00000615335 CARD14Q9BXL6 1004 aa17.22■□□□□ 0.35
FOXN3-219ENST00000615335 FMN2Q9NZ56 1722 aa17.22■□□□□ 0.35
FOXN3-219ENST00000615335 HDGFL2Q7Z4V5 671 aaPredicted RBP17.22■□□□□ 0.35
FOXN3-219ENST00000615335 RGPD8O14715 1765 aaPredicted RBP17.22■□□□□ 0.35
FOXN3-219ENST00000615335 NCOA3Q9Y6Q9 1424 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms