RNA–Protein interactions for RNA: ENST00000614478.1

GEN1-208, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

Gene GEN1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-208ENST00000614478 XRN1Q8IZH2 1706 aaKnown RBP24.16■■□□□ 1.46
GEN1-208ENST00000614478 ZNF335Q9H4Z2 1342 aaPredicted RBP24.15■■□□□ 1.46
GEN1-208ENST00000614478 KTN1Q86UP2 1357 aaKnown RBP24.14■■□□□ 1.46
GEN1-208ENST00000614478 KCNA6P17658 529 aa24.14■■□□□ 1.45
GEN1-208ENST00000614478 SAFB2Q14151 953 aaKnown RBP eCLIP24.14■■□□□ 1.45
GEN1-208ENST00000614478 RALBP1Q15311 655 aa24.14■■□□□ 1.45
GEN1-208ENST00000614478 MRS2Q9HD23 443 aa24.14■■□□□ 1.45
GEN1-208ENST00000614478 PTPRUQ92729 1446 aa24.14■■□□□ 1.45
GEN1-208ENST00000614478 KNDC1Q76NI1 1749 aa24.13■■□□□ 1.45
GEN1-208ENST00000614478 PRAM1Q96QH2 718 aa24.13■■□□□ 1.45
GEN1-208ENST00000614478 POGKQ9P215 609 aa24.13■■□□□ 1.45
GEN1-208ENST00000614478 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
GEN1-208ENST00000614478 EVC2Q86UK5 1308 aa24.12■■□□□ 1.45
GEN1-208ENST00000614478 NKTRP30414 1462 aaKnown RBP24.12■■□□□ 1.45
GEN1-208ENST00000614478 AMOTL2Q9Y2J4 779 aa24.11■■□□□ 1.45
GEN1-208ENST00000614478 CPS1P31327 1500 aa24.11■■□□□ 1.45
GEN1-208ENST00000614478 LTBP4Q8N2S1 1624 aa24.1■■□□□ 1.45
GEN1-208ENST00000614478 TULP4Q9NRJ4 1543 aa24.1■■□□□ 1.45
GEN1-208ENST00000614478 KNSTRNQ9Y448 316 aa24.09■■□□□ 1.45
GEN1-208ENST00000614478 DLC1Q96QB1 1528 aa24.09■■□□□ 1.45
GEN1-208ENST00000614478 ABCC11Q96J66 1382 aa24.09■■□□□ 1.45
GEN1-208ENST00000614478 PUS7Q96PZ0 661 aaKnown RBP24.09■■□□□ 1.45
GEN1-208ENST00000614478 TECPR2O15040 1411 aa24.08■■□□□ 1.45
GEN1-208ENST00000614478 PARD3Q8TEW0 1356 aa24.08■■□□□ 1.45
GEN1-208ENST00000614478 CC2D1BQ5T0F9 858 aaKnown RBP24.08■■□□□ 1.45
GEN1-208ENST00000614478 MYBBP1AQ9BQG0 1328 aaKnown RBP24.07■■□□□ 1.44
GEN1-208ENST00000614478 PTCH1Q13635 1447 aa24.07■■□□□ 1.44
GEN1-208ENST00000614478 MINK1Q8N4C8 1332 aaPredicted RBP24.05■■□□□ 1.44
GEN1-208ENST00000614478 TMC1Q8TDI8 760 aa24.04■■□□□ 1.44
GEN1-208ENST00000614478 WAPLQ7Z5K2 1190 aa24.03■■□□□ 1.44
GEN1-208ENST00000614478 CABP2Q9NPB3 220 aa24.03■■□□□ 1.44
GEN1-208ENST00000614478 AMER1Q5JTC6 1135 aaPredicted RBP24.02■■□□□ 1.44
GEN1-208ENST00000614478 SLC12A5Q9H2X9 1139 aa24.02■■□□□ 1.44
GEN1-208ENST00000614478 GTF3C3Q9Y5Q9 886 aa24.02■■□□□ 1.44
GEN1-208ENST00000614478 XIRP1Q702N8 1843 aaKnown RBP24.02■■□□□ 1.44
GEN1-208ENST00000614478 FAM9BQ8IZU0 186 aa24.02■■□□□ 1.44
GEN1-208ENST00000614478 LRRC7Q96NW7 1537 aa24.01■■□□□ 1.43
GEN1-208ENST00000614478 PLEKHH1Q9ULM0 1364 aa24.01■■□□□ 1.43
GEN1-208ENST00000614478 ROBO2Q9HCK4 1378 aa24■■□□□ 1.43
GEN1-208ENST00000614478 CARD14Q9BXL6 1004 aa24■■□□□ 1.43
GEN1-208ENST00000614478 FAM135BQ49AJ0 1406 aa24■■□□□ 1.43
GEN1-208ENST00000614478 BRD4O60885 1362 aaPredicted RBP24■■□□□ 1.43
GEN1-208ENST00000614478 SRPK2P78362 688 aaKnown RBP24■■□□□ 1.43
GEN1-208ENST00000614478 PROSER2Q86WR7 435 aaPredicted RBP24■■□□□ 1.43
GEN1-208ENST00000614478 SIRT1Q96EB6 747 aa24■■□□□ 1.43
GEN1-208ENST00000614478 NPC1L1Q9UHC9 1359 aa23.98■■□□□ 1.43
GEN1-208ENST00000614478 NLRP13Q86W25 1043 aa23.98■■□□□ 1.43
GEN1-208ENST00000614478 NCOA3Q9Y6Q9 1424 aa23.97■■□□□ 1.43
GEN1-208ENST00000614478 TMEM94Q12767 1356 aa23.97■■□□□ 1.43
GEN1-208ENST00000614478 CDK19Q9BWU1 502 aa23.96■■□□□ 1.43
GEN1-208ENST00000614478 ATAD2Q6PL18 1390 aa23.95■■□□□ 1.42
GEN1-208ENST00000614478 HNRNPUQ00839 825 aaKnown RBP eCLIP23.94■■□□□ 1.42
GEN1-208ENST00000614478 PNISRQ8TF01 805 aaKnown RBP23.94■■□□□ 1.42
GEN1-208ENST00000614478 NALCNQ8IZF0 1738 aa23.93■■□□□ 1.42
GEN1-208ENST00000614478 NINLQ9Y2I6 1382 aa23.93■■□□□ 1.42
GEN1-208ENST00000614478 IQSEC2Q5JU85 1478 aa23.92■■□□□ 1.42
GEN1-208ENST00000614478 NSD3Q9BZ95 1437 aa23.92■■□□□ 1.42
GEN1-208ENST00000614478 ANKRD36BQ8N2N9 1353 aa23.92■■□□□ 1.42
GEN1-208ENST00000614478 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.91■■□□□ 1.42
GEN1-208ENST00000614478 RBM33Q96EV2 1170 aaKnown RBP23.91■■□□□ 1.42
GEN1-208ENST00000614478 ADGRL3Q9HAR2 1447 aa23.9■■□□□ 1.42
GEN1-208ENST00000614478 C14orf37Q86TY3 774 aa23.88■■□□□ 1.41
GEN1-208ENST00000614478 CERKQ8TCT0 537 aa23.88■■□□□ 1.41
GEN1-208ENST00000614478 WASLO00401 505 aaPredicted RBP23.87■■□□□ 1.41
GEN1-208ENST00000614478 PPP2R1AP30153 589 aa23.87■■□□□ 1.41
GEN1-208ENST00000614478 MSH6P52701 1360 aa23.87■■□□□ 1.41
GEN1-208ENST00000614478 ADGRB2O60241 1585 aa23.86■■□□□ 1.41
GEN1-208ENST00000614478 C19orf44Q9H6X5 657 aa23.85■■□□□ 1.41
GEN1-208ENST00000614478 DCCP43146 1447 aa23.85■■□□□ 1.41
GEN1-208ENST00000614478 USP32Q8NFA0 1604 aa23.85■■□□□ 1.41
GEN1-208ENST00000614478 A0A1W2PP64 1363 aa23.85■■□□□ 1.41
GEN1-208ENST00000614478 CDC42BPGQ6DT37 1551 aa23.84■■□□□ 1.41
GEN1-208ENST00000614478 TERF2IPQ9NYB0 399 aa23.83■■□□□ 1.41
GEN1-208ENST00000614478 CABP1Q9NZU7 370 aa23.83■■□□□ 1.41
GEN1-208ENST00000614478 CGNL1Q0VF96 1302 aa23.83■■□□□ 1.41
GEN1-208ENST00000614478 CD163L1Q9NR16 1453 aa23.82■■□□□ 1.4
GEN1-208ENST00000614478 HDGFL2Q7Z4V5 671 aaPredicted RBP23.79■■□□□ 1.4
GEN1-208ENST00000614478 MORC1Q86VD1 984 aa23.79■■□□□ 1.4
GEN1-208ENST00000614478 FMN2Q9NZ56 1722 aa23.78■■□□□ 1.4
GEN1-208ENST00000614478 ATF3P18847 181 aa23.78■■□□□ 1.4
GEN1-208ENST00000614478 CADPS2Q86UW7 1296 aa23.78■■□□□ 1.4
GEN1-208ENST00000614478 NUDT16Q96DE0 195 aaKnown RBP23.77■■□□□ 1.4
GEN1-208ENST00000614478 NSD2O96028 1365 aa23.77■■□□□ 1.39
GEN1-208ENST00000614478 ZBED9Q6R2W3 1325 aa23.76■■□□□ 1.39
GEN1-208ENST00000614478 ATP7BP35670 1465 aa23.75■■□□□ 1.39
GEN1-208ENST00000614478 PPIP5K1Q6PFW1 1433 aa23.75■■□□□ 1.39
GEN1-208ENST00000614478 CCDC61Q9Y6R9 512 aa23.75■■□□□ 1.39
GEN1-208ENST00000614478 TOM1O60784 492 aa23.73■■□□□ 1.39
GEN1-208ENST00000614478 RGPD8O14715 1765 aaPredicted RBP23.72■■□□□ 1.39
GEN1-208ENST00000614478 MST1RQ04912 1400 aa23.72■■□□□ 1.39
GEN1-208ENST00000614478 PRR36Q9H6K5 1346 aa23.71■■□□□ 1.39
GEN1-208ENST00000614478 TNNT2P45379 298 aaPredicted RBP23.7■■□□□ 1.39
GEN1-208ENST00000614478 CPSF1Q10570 1443 aaKnown RBP23.7■■□□□ 1.38
GEN1-208ENST00000614478 FYB1O15117 783 aa23.69■■□□□ 1.38
GEN1-208ENST00000614478 ITSN1Q15811 1721 aa23.69■■□□□ 1.38
GEN1-208ENST00000614478 UBAP1LF5GYI3 381 aa23.68■■□□□ 1.38
GEN1-208ENST00000614478 SLAIN2Q9P270 581 aa23.68■■□□□ 1.38
GEN1-208ENST00000614478 INSRP06213 1382 aa23.68■■□□□ 1.38
GEN1-208ENST00000614478 ANKARQ7Z5J8 1434 aa23.68■■□□□ 1.38
GEN1-208ENST00000614478 GGNBP2Q9H3C7 697 aa23.68■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms