RNA–Protein interactions for RNA: ENST00000614410.4

ALMS1-207, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ALMS1, Length 11,700 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-207ENST00000614410 GOLGA6L10A0A0M3HER8 536 aa8.56□□□□□ -1.04
ALMS1-207ENST00000614410 GOLGA6L10A6NI86 522 aa8.56□□□□□ -1.04
ALMS1-207ENST00000614410 RBM33Q96EV2 1170 aaKnown RBP8.56□□□□□ -1.04
ALMS1-207ENST00000614410 NAT10Q9H0A0 1025 aaKnown RBP8.56□□□□□ -1.04
ALMS1-207ENST00000614410 TTC5Q8N0Z6 440 aa8.56□□□□□ -1.04
ALMS1-207ENST00000614410 DYDC1Q8WWB3 177 aa8.56□□□□□ -1.04
ALMS1-207ENST00000614410 ERICH4A6NGS2 130 aa8.56□□□□□ -1.04
ALMS1-207ENST00000614410 RIC3Q7Z5B4 369 aa8.55□□□□□ -1.04
ALMS1-207ENST00000614410 CCAR1Q8IX12 1150 aaKnown RBP8.55□□□□□ -1.04
ALMS1-207ENST00000614410 ERCC4Q92889 916 aaPredicted RBP8.55□□□□□ -1.04
ALMS1-207ENST00000614410 FKBP5Q13451 457 aaPredicted RBP8.55□□□□□ -1.04
ALMS1-207ENST00000614410 MAGEC2Q9UBF1 373 aaPredicted RBP8.55□□□□□ -1.04
ALMS1-207ENST00000614410 TAF3Q5VWG9 929 aa8.55□□□□□ -1.04
ALMS1-207ENST00000614410 LRRFIP2Q9Y608 721 aaKnown RBP8.55□□□□□ -1.04
ALMS1-207ENST00000614410 KIF3BO15066 747 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 NUCB2P80303 420 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 PPP1R1BQ9UD71 204 aaPredicted RBP8.54□□□□□ -1.04
ALMS1-207ENST00000614410 APAF1O14727 1248 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 FILIP1LQ4L180 1135 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 NF2P35240 595 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 HNRNPMP52272 730 aaKnown RBP eCLIP8.54□□□□□ -1.041e-10■■■■■ 36.4
ALMS1-207ENST00000614410 TRAK2O60296 914 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 PDCL3Q9H2J4 239 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 CCDC66A2RUB6 948 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 NFKBIBQ15653 356 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 INTS3Q68E01 1043 aaKnown RBP8.54□□□□□ -1.04
ALMS1-207ENST00000614410 CDK5RAP3Q96JB5 506 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 PRPF40AO75400 957 aaKnown RBP8.54□□□□□ -1.04
ALMS1-207ENST00000614410 HMOX1P09601 288 aa8.54□□□□□ -1.04
ALMS1-207ENST00000614410 PPM1FP49593 454 aaPredicted RBP8.54□□□□□ -1.04
ALMS1-207ENST00000614410 RRP1P56182 461 aaKnown RBP8.54□□□□□ -1.04
ALMS1-207ENST00000614410 SMARCE1Q969G3 411 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 BRMS1Q9HCU9 246 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 ERLIN2O94905 339 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 C22orf23Q9BZE7 217 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 NUP155O75694 1391 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 KIAA0754O94854 1291 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 RIPK4P57078 832 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 PSME1Q06323 249 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 NLRP13Q86W25 1043 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 DEF6Q9H4E7 631 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 XBP1P17861 261 aa8.53□□□□□ -1.04
ALMS1-207ENST00000614410 SERPINC1P01008 464 aa8.52□□□□□ -1.04
ALMS1-207ENST00000614410 CCDC181Q5TID7 509 aa8.52□□□□□ -1.04
ALMS1-207ENST00000614410 PODXL2Q9NZ53 605 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 PKNOX2Q96KN3 472 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 TANGO6Q9C0B7 1094 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 SETD5Q9C0A6 1442 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 DNAJC2Q99543 621 aaKnown RBP8.52□□□□□ -1.05
ALMS1-207ENST00000614410 CCDC39Q9UFE4 941 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 DDX58O95786 925 aaKnown RBP8.52□□□□□ -1.05
ALMS1-207ENST00000614410 KRT18P05783 430 aaKnown RBP8.52□□□□□ -1.05
ALMS1-207ENST00000614410 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.52□□□□□ -1.05
ALMS1-207ENST00000614410 STK3Q13188 491 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 IL27Q8NEV9 243 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 COG3Q96JB2 828 aa8.52□□□□□ -1.05
ALMS1-207ENST00000614410 SEPT11Q9NVA2 429 aaKnown RBP8.51□□□□□ -1.05
ALMS1-207ENST00000614410 KINO60870 393 aaKnown RBP8.51□□□□□ -1.05
ALMS1-207ENST00000614410 ST20-MTHFSA0A0A6YYL1 179 aa8.51□□□□□ -1.05
ALMS1-207ENST00000614410 SSR1P43307 286 aaKnown RBP8.51□□□□□ -1.05
ALMS1-207ENST00000614410 TICAM2Q86XR7 235 aa8.51□□□□□ -1.05
ALMS1-207ENST00000614410 E9PSI1 815 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 GBP2P32456 591 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-207ENST00000614410 L3MBTL2Q969R5 705 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 TSPYL4Q9UJ04 414 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 WASHC2CQ9Y4E1 1318 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 MATR3P43243 847 aaKnown RBP eCLIP8.5□□□□□ -1.058e-6■■■□□ 17.4
ALMS1-207ENST00000614410 MAP4K4O95819 1239 aaPredicted RBP8.5□□□□□ -1.05
ALMS1-207ENST00000614410 PIBF1Q8WXW3 757 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 FIBPO43427 364 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 BCCIPQ9P287 314 aaKnown RBP eCLIP8.5□□□□□ -1.05
ALMS1-207ENST00000614410 ERCC6Q03468 1493 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 BRPF3Q9ULD4 1205 aa8.5□□□□□ -1.05
ALMS1-207ENST00000614410 HMGN5P82970 282 aaKnown RBP8.49□□□□□ -1.05
ALMS1-207ENST00000614410 NUTM2GQ5VZR2 741 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 CCDC113Q9H0I3 377 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 ZNHIT6Q9NWK9 470 aaKnown RBP8.49□□□□□ -1.05
ALMS1-207ENST00000614410 DDX19BQ9UMR2 479 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 MINK1Q8N4C8 1332 aaPredicted RBP8.49□□□□□ -1.05
ALMS1-207ENST00000614410 PDE3BQ13370 1112 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 PSMD1Q99460 953 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 EIF3AQ14152 1382 aaKnown RBP8.49□□□□□ -1.05
ALMS1-207ENST00000614410 TXLNAP40222 546 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 DZIP1LQ8IYY4 767 aaKnown RBP8.49□□□□□ -1.05
ALMS1-207ENST00000614410 TSPY26PQ9H489 355 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 PRDM10Q9NQV6 1147 aa8.49□□□□□ -1.05
ALMS1-207ENST00000614410 PANK1Q8TE04 598 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 NEK4P51957 841 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 MAP2K1Q02750 393 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-207ENST00000614410 TTC16Q8NEE8 873 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 TRERF1Q96PN7 1200 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 ANKRD18AQ8IVF6 992 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 ZNF526Q8TF50 670 aaPredicted RBP8.48□□□□□ -1.05
ALMS1-207ENST00000614410 PPFIBP1Q86W92 1011 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 CNTROBQ8N137 903 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 GPATCH11Q8N954 259 aa8.48□□□□□ -1.05
ALMS1-207ENST00000614410 GOLGA6L7A0A1B0GV03 622 aa8.47□□□□□ -1.05
ALMS1-207ENST00000614410 MRE11P49959 708 aa8.47□□□□□ -1.05
ALMS1-207ENST00000614410 ERC2O15083 957 aa8.47□□□□□ -1.05
ALMS1-207ENST00000614410 CFAP45Q9UL16 551 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms