RNA–Protein interactions for RNA: ENST00000614051.1

CCL3-206, Transcript of C-C motif chemokine ligand 3, humanhuman

TSL 1 (best)

Gene CCL3, Length 1,494 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3-206ENST00000614051 TESK2Q96S53 571 aa21.81■■□□□ 1.08
CCL3-206ENST00000614051 STRCP1A6NGW2 1772 aa21.81■■□□□ 1.08
CCL3-206ENST00000614051 POGKQ9P215 609 aa21.8■■□□□ 1.08
CCL3-206ENST00000614051 NWD1Q149M9 1564 aa21.78■■□□□ 1.08
CCL3-206ENST00000614051 C11orf95C9JLR9 678 aaPredicted RBP21.78■■□□□ 1.08
CCL3-206ENST00000614051 POTEDQ86YR6 584 aa21.77■■□□□ 1.08
CCL3-206ENST00000614051 ZNF335Q9H4Z2 1342 aaPredicted RBP21.77■■□□□ 1.08
CCL3-206ENST00000614051 FAM135BQ49AJ0 1406 aa21.76■■□□□ 1.07
CCL3-206ENST00000614051 SIRT1Q96EB6 747 aa21.76■■□□□ 1.07
CCL3-206ENST00000614051 PTCH1Q13635 1447 aa21.76■■□□□ 1.07
CCL3-206ENST00000614051 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.75■■□□□ 1.07
CCL3-206ENST00000614051 DISP3Q9P2K9 1392 aa21.75■■□□□ 1.07
CCL3-206ENST00000614051 MINK1Q8N4C8 1332 aaPredicted RBP21.74■■□□□ 1.07
CCL3-206ENST00000614051 RBM33Q96EV2 1170 aaKnown RBP21.73■■□□□ 1.07
CCL3-206ENST00000614051 CNKSR2Q8WXI2 1034 aa21.71■■□□□ 1.07
CCL3-206ENST00000614051 SBNO2Q9Y2G9 1366 aa21.71■■□□□ 1.07
CCL3-206ENST00000614051 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
CCL3-206ENST00000614051 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.06
CCL3-206ENST00000614051 UBAP1LF5GYI3 381 aa21.7■■□□□ 1.06
CCL3-206ENST00000614051 TMF1P82094 1093 aa21.7■■□□□ 1.06
CCL3-206ENST00000614051 POLR3GLQ9BT43 218 aa21.7■■□□□ 1.06
CCL3-206ENST00000614051 KIF7Q2M1P5 1343 aa21.69■■□□□ 1.06
CCL3-206ENST00000614051 NKTRP30414 1462 aaKnown RBP21.68■■□□□ 1.06
CCL3-206ENST00000614051 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
CCL3-206ENST00000614051 PROSER2Q86WR7 435 aaPredicted RBP21.68■■□□□ 1.06
CCL3-206ENST00000614051 NALCNQ8IZF0 1738 aa21.68■■□□□ 1.06
CCL3-206ENST00000614051 XIRP1Q702N8 1843 aaKnown RBP21.64■■□□□ 1.06
CCL3-206ENST00000614051 EVC2Q86UK5 1308 aa21.64■■□□□ 1.06
CCL3-206ENST00000614051 ADGRB2O60241 1585 aa21.64■■□□□ 1.05
CCL3-206ENST00000614051 NCBP3Q53F19 620 aaKnown RBP21.64■■□□□ 1.05
CCL3-206ENST00000614051 CDK19Q9BWU1 502 aa21.63■■□□□ 1.05
CCL3-206ENST00000614051 CABP2Q9NPB3 220 aa21.63■■□□□ 1.05
CCL3-206ENST00000614051 TOM1O60784 492 aa21.62■■□□□ 1.05
CCL3-206ENST00000614051 WASLO00401 505 aaPredicted RBP21.61■■□□□ 1.05
CCL3-206ENST00000614051 SLC24A1O60721 1099 aa21.61■■□□□ 1.05
CCL3-206ENST00000614051 TMEM94Q12767 1356 aa21.61■■□□□ 1.05
CCL3-206ENST00000614051 SRPK2P78362 688 aaKnown RBP21.6■■□□□ 1.05
CCL3-206ENST00000614051 C14orf37Q86TY3 774 aa21.6■■□□□ 1.05
CCL3-206ENST00000614051 LRRC7Q96NW7 1537 aa21.59■■□□□ 1.05
CCL3-206ENST00000614051 ADGRL3Q9HAR2 1447 aa21.59■■□□□ 1.05
CCL3-206ENST00000614051 DDX10Q13206 875 aaKnown RBP21.59■■□□□ 1.05
CCL3-206ENST00000614051 CDCA8Q53HL2 280 aa21.58■■□□□ 1.05
CCL3-206ENST00000614051 MYOM1P52179 1685 aa21.58■■□□□ 1.05
CCL3-206ENST00000614051 RGPD8O14715 1765 aaPredicted RBP21.56■■□□□ 1.04
CCL3-206ENST00000614051 FMN2Q9NZ56 1722 aa21.56■■□□□ 1.04
CCL3-206ENST00000614051 NUTM2FA1L443 756 aa21.56■■□□□ 1.04
CCL3-206ENST00000614051 KCNA4P22459 653 aa21.56■■□□□ 1.04
CCL3-206ENST00000614051 CDC42BPGQ6DT37 1551 aa21.55■■□□□ 1.04
CCL3-206ENST00000614051 USP32Q8NFA0 1604 aa21.55■■□□□ 1.04
CCL3-206ENST00000614051 PRR36Q9H6K5 1346 aa21.54■■□□□ 1.04
CCL3-206ENST00000614051 NUDT16Q96DE0 195 aaKnown RBP21.52■■□□□ 1.04
CCL3-206ENST00000614051 PUS7Q96PZ0 661 aaKnown RBP21.52■■□□□ 1.04
CCL3-206ENST00000614051 NCOA3Q9Y6Q9 1424 aa21.52■■□□□ 1.03
CCL3-206ENST00000614051 TMC1Q8TDI8 760 aa21.52■■□□□ 1.03
CCL3-206ENST00000614051 ATP7BP35670 1465 aa21.51■■□□□ 1.03
CCL3-206ENST00000614051 SLC12A5Q9H2X9 1139 aa21.51■■□□□ 1.03
CCL3-206ENST00000614051 C19orf44Q9H6X5 657 aa21.51■■□□□ 1.03
CCL3-206ENST00000614051 ILDR2Q71H61 639 aa21.5■■□□□ 1.03
CCL3-206ENST00000614051 ATAD2Q6PL18 1390 aa21.5■■□□□ 1.03
CCL3-206ENST00000614051 TOPAZ1Q8N9V7 1692 aa21.49■■□□□ 1.03
CCL3-206ENST00000614051 PIP4K2BP78356 416 aa21.49■■□□□ 1.03
CCL3-206ENST00000614051 MSH6P52701 1360 aa21.47■■□□□ 1.03
CCL3-206ENST00000614051 SOCS7O14512 581 aa21.47■■□□□ 1.03
CCL3-206ENST00000614051 CABP1Q9NZU7 370 aa21.47■■□□□ 1.03
CCL3-206ENST00000614051 PANK3Q9H999 370 aa21.46■■□□□ 1.03
CCL3-206ENST00000614051 PPIP5K1Q6PFW1 1433 aa21.46■■□□□ 1.03
CCL3-206ENST00000614051 ITSN1Q15811 1721 aa21.46■■□□□ 1.03
CCL3-206ENST00000614051 ATF3P18847 181 aa21.45■■□□□ 1.03
CCL3-206ENST00000614051 CCDC61Q9Y6R9 512 aa21.45■■□□□ 1.03
CCL3-206ENST00000614051 ANKARQ7Z5J8 1434 aa21.45■■□□□ 1.02
CCL3-206ENST00000614051 DCCP43146 1447 aa21.44■■□□□ 1.02
CCL3-206ENST00000614051 HSPA1LP34931 641 aa21.44■■□□□ 1.02
CCL3-206ENST00000614051 DIEXFQ68CQ4 756 aaKnown RBP21.43■■□□□ 1.02
CCL3-206ENST00000614051 CD163L1Q9NR16 1453 aa21.42■■□□□ 1.02
CCL3-206ENST00000614051 MST1RQ04912 1400 aa21.42■■□□□ 1.02
CCL3-206ENST00000614051 PMFBP1Q8TBY8 1022 aa21.41■■□□□ 1.02
CCL3-206ENST00000614051 NINLQ9Y2I6 1382 aa21.41■■□□□ 1.02
CCL3-206ENST00000614051 CADPS2Q86UW7 1296 aa21.4■■□□□ 1.02
CCL3-206ENST00000614051 C1orf167Q5SNV9 1468 aa21.4■■□□□ 1.02
CCL3-206ENST00000614051 AKAP12Q02952 1782 aa21.4■■□□□ 1.02
CCL3-206ENST00000614051 CARD14Q9BXL6 1004 aa21.39■■□□□ 1.02
CCL3-206ENST00000614051 A0A1W2PP64 1363 aa21.39■■□□□ 1.02
CCL3-206ENST00000614051 ESCO1Q5FWF5 840 aa21.39■■□□□ 1.01
CCL3-206ENST00000614051 ORAI2Q96SN7 254 aa21.39■■□□□ 1.01
CCL3-206ENST00000614051 ANKRD36BQ8N2N9 1353 aa21.39■■□□□ 1.01
CCL3-206ENST00000614051 PLEKHG3A1L390 1219 aa21.38■■□□□ 1.01
CCL3-206ENST00000614051 ACEP12821 1306 aa21.37■■□□□ 1.01
CCL3-206ENST00000614051 PER1O15534 1290 aaPredicted RBP21.37■■□□□ 1.01
CCL3-206ENST00000614051 TERF2IPQ9NYB0 399 aa21.37■■□□□ 1.01
CCL3-206ENST00000614051 PHF8Q9UPP1 1060 aa21.36■■□□□ 1.01
CCL3-206ENST00000614051 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
CCL3-206ENST00000614051 MON2Q7Z3U7 1717 aa21.35■■□□□ 1.01
CCL3-206ENST00000614051 NPM3O75607 178 aaKnown RBP21.35■■□□□ 1.01
CCL3-206ENST00000614051 CNGB1Q14028 1251 aaPredicted RBP21.35■■□□□ 1.01
CCL3-206ENST00000614051 HDGFL2Q7Z4V5 671 aaPredicted RBP21.35■■□□□ 1.01
CCL3-206ENST00000614051 RNF216Q9NWF9 866 aaPredicted RBP21.35■■□□□ 1.01
CCL3-206ENST00000614051 NSD3Q9BZ95 1437 aa21.34■■□□□ 1.01
CCL3-206ENST00000614051 HOXD11P31277 338 aaPredicted RBP21.33■■□□□ 1.01
CCL3-206ENST00000614051 NGDNQ8NEJ9 315 aaKnown RBP21.33■■□□□ 1.01
CCL3-206ENST00000614051 SLAIN2Q9P270 581 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms