RNA–Protein interactions for RNA: ENST00000613462.1

SRGAP2C-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5

Gene SRGAP2C, Length 484 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-204ENST00000613462 MSH6P52701 1360 aa18.47■□□□□ 0.55
SRGAP2C-204ENST00000613462 NBPF1Q3BBV0 1214 aa18.47■□□□□ 0.55
SRGAP2C-204ENST00000613462 DCCP43146 1447 aa18.47■□□□□ 0.55
SRGAP2C-204ENST00000613462 ADGRL3Q9HAR2 1447 aa18.47■□□□□ 0.55
SRGAP2C-204ENST00000613462 EIF3AQ14152 1382 aaKnown RBP18.46■□□□□ 0.55
SRGAP2C-204ENST00000613462 RGS17Q9UGC6 210 aaPredicted RBP18.46■□□□□ 0.55
SRGAP2C-204ENST00000613462 ADGRB2O60241 1585 aa18.46■□□□□ 0.55
SRGAP2C-204ENST00000613462 CDC42BPGQ6DT37 1551 aa18.46■□□□□ 0.55
SRGAP2C-204ENST00000613462 C14orf37Q86TY3 774 aa18.44■□□□□ 0.54
SRGAP2C-204ENST00000613462 TRAK1Q9UPV9 953 aa18.44■□□□□ 0.54
SRGAP2C-204ENST00000613462 CARD11Q9BXL7 1154 aa18.42■□□□□ 0.54
SRGAP2C-204ENST00000613462 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
SRGAP2C-204ENST00000613462 POGKQ9P215 609 aa18.42■□□□□ 0.54
SRGAP2C-204ENST00000613462 PRAM1Q96QH2 718 aa18.41■□□□□ 0.54
SRGAP2C-204ENST00000613462 FMN2Q9NZ56 1722 aa18.4■□□□□ 0.54
SRGAP2C-204ENST00000613462 PHF23Q9BUL5 403 aaPredicted RBP18.4■□□□□ 0.54
SRGAP2C-204ENST00000613462 PLEKHH1Q9ULM0 1364 aa18.4■□□□□ 0.54
SRGAP2C-204ENST00000613462 WAPLQ7Z5K2 1190 aa18.39■□□□□ 0.53
SRGAP2C-204ENST00000613462 CADPS2Q86UW7 1296 aa18.39■□□□□ 0.53
SRGAP2C-204ENST00000613462 RBM33Q96EV2 1170 aaKnown RBP18.39■□□□□ 0.53
SRGAP2C-204ENST00000613462 ATF3P18847 181 aa18.37■□□□□ 0.53
SRGAP2C-204ENST00000613462 CENPJQ9HC77 1338 aaPredicted RBP18.37■□□□□ 0.53
SRGAP2C-204ENST00000613462 ITSN1Q15811 1721 aa18.37■□□□□ 0.53
SRGAP2C-204ENST00000613462 USP47Q96K76 1375 aa18.34■□□□□ 0.53
SRGAP2C-204ENST00000613462 SBNO2Q9Y2G9 1366 aa18.34■□□□□ 0.53
SRGAP2C-204ENST00000613462 RGPD8O14715 1765 aaPredicted RBP18.34■□□□□ 0.53
SRGAP2C-204ENST00000613462 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.52
SRGAP2C-204ENST00000613462 ROBO1Q9Y6N7 1651 aa18.33■□□□□ 0.52
SRGAP2C-204ENST00000613462 MST1RQ04912 1400 aa18.32■□□□□ 0.52
SRGAP2C-204ENST00000613462 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
SRGAP2C-204ENST00000613462 TULP4Q9NRJ4 1543 aa18.31■□□□□ 0.52
SRGAP2C-204ENST00000613462 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
SRGAP2C-204ENST00000613462 MINK1Q8N4C8 1332 aaPredicted RBP18.3■□□□□ 0.52
SRGAP2C-204ENST00000613462 SLC24A1O60721 1099 aa18.3■□□□□ 0.52
SRGAP2C-204ENST00000613462 ANKARQ7Z5J8 1434 aa18.3■□□□□ 0.52
SRGAP2C-204ENST00000613462 USP32Q8NFA0 1604 aa18.3■□□□□ 0.52
SRGAP2C-204ENST00000613462 SLAIN2Q9P270 581 aa18.29■□□□□ 0.52
SRGAP2C-204ENST00000613462 TOPAZ1Q8N9V7 1692 aa18.28■□□□□ 0.52
SRGAP2C-204ENST00000613462 NHSL1Q5SYE7 1610 aa18.27■□□□□ 0.52
SRGAP2C-204ENST00000613462 C1orf167Q5SNV9 1468 aa18.27■□□□□ 0.52
SRGAP2C-204ENST00000613462 WASLO00401 505 aaPredicted RBP18.27■□□□□ 0.52
SRGAP2C-204ENST00000613462 POTEAQ6S8J7 498 aa18.27■□□□□ 0.52
SRGAP2C-204ENST00000613462 HIRIP3Q9BW71 556 aaPredicted RBP18.26■□□□□ 0.51
SRGAP2C-204ENST00000613462 EVC2Q86UK5 1308 aa18.25■□□□□ 0.51
SRGAP2C-204ENST00000613462 ST20-MTHFSA0A0A6YYL1 179 aa18.24■□□□□ 0.51
SRGAP2C-204ENST00000613462 EIF4G2P78344 907 aaKnown RBP eCLIP18.24■□□□□ 0.51
SRGAP2C-204ENST00000613462 ATP7BP35670 1465 aa18.24■□□□□ 0.51
SRGAP2C-204ENST00000613462 AHDC1Q5TGY3 1603 aaPredicted RBP18.23■□□□□ 0.51
SRGAP2C-204ENST00000613462 PHLPP1O60346 1717 aa18.23■□□□□ 0.51
SRGAP2C-204ENST00000613462 CDK19Q9BWU1 502 aa18.22■□□□□ 0.51
SRGAP2C-204ENST00000613462 TESK2Q96S53 571 aa18.21■□□□□ 0.51
SRGAP2C-204ENST00000613462 SRPK2P78362 688 aaKnown RBP18.2■□□□□ 0.5
SRGAP2C-204ENST00000613462 SRCAPQ6ZRS2 3230 aa18.19■□□□□ 0.5
SRGAP2C-204ENST00000613462 ATAD2Q6PL18 1390 aa18.19■□□□□ 0.5
SRGAP2C-204ENST00000613462 BRINP3Q76B58 766 aa18.19■□□□□ 0.5
SRGAP2C-204ENST00000613462 PUS7Q96PZ0 661 aaKnown RBP18.19■□□□□ 0.5
SRGAP2C-204ENST00000613462 TMF1P82094 1093 aa18.18■□□□□ 0.5
SRGAP2C-204ENST00000613462 AKAP12Q02952 1782 aa18.17■□□□□ 0.5
SRGAP2C-204ENST00000613462 HSPA5P11021 654 aaKnown RBP18.17■□□□□ 0.5
SRGAP2C-204ENST00000613462 CDCA8Q53HL2 280 aa18.17■□□□□ 0.5
SRGAP2C-204ENST00000613462 ESCO1Q5FWF5 840 aa18.17■□□□□ 0.5
SRGAP2C-204ENST00000613462 NUDT16Q96DE0 195 aaKnown RBP18.17■□□□□ 0.5
SRGAP2C-204ENST00000613462 PRR36Q9H6K5 1346 aa18.17■□□□□ 0.5
SRGAP2C-204ENST00000613462 COL16A1Q07092 1604 aaPredicted RBP18.16■□□□□ 0.5
SRGAP2C-204ENST00000613462 NUTM2FA1L443 756 aa18.16■□□□□ 0.5
SRGAP2C-204ENST00000613462 CCDC61Q9Y6R9 512 aa18.16■□□□□ 0.5
SRGAP2C-204ENST00000613462 CABP2Q9NPB3 220 aa18.15■□□□□ 0.5
SRGAP2C-204ENST00000613462 PHF8Q9UPP1 1060 aa18.15■□□□□ 0.5
SRGAP2C-204ENST00000613462 NPHP3Q7Z494 1330 aa18.15■□□□□ 0.5
SRGAP2C-204ENST00000613462 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SRGAP2C-204ENST00000613462 ORAI2Q96SN7 254 aa18.14■□□□□ 0.49
SRGAP2C-204ENST00000613462 NINLQ9Y2I6 1382 aa18.14■□□□□ 0.49
SRGAP2C-204ENST00000613462 MYOM1P52179 1685 aa18.12■□□□□ 0.49
SRGAP2C-204ENST00000613462 PXDNQ92626 1479 aa18.12■□□□□ 0.49
SRGAP2C-204ENST00000613462 MON2Q7Z3U7 1717 aa18.12■□□□□ 0.49
SRGAP2C-204ENST00000613462 TRPM3Q9HCF6 1732 aaPredicted RBP18.12■□□□□ 0.49
SRGAP2C-204ENST00000613462 POLR3AO14802 1390 aaPredicted RBP18.11■□□□□ 0.49
SRGAP2C-204ENST00000613462 SHPRHQ149N8 1683 aa18.11■□□□□ 0.49
SRGAP2C-204ENST00000613462 PLEKHG3A1L390 1219 aa18.1■□□□□ 0.49
SRGAP2C-204ENST00000613462 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.49
SRGAP2C-204ENST00000613462 NGDNQ8NEJ9 315 aaKnown RBP18.08■□□□□ 0.48
SRGAP2C-204ENST00000613462 ALS2Q96Q42 1657 aa18.07■□□□□ 0.48
SRGAP2C-204ENST00000613462 FOXO3O43524 673 aa18.07■□□□□ 0.48
SRGAP2C-204ENST00000613462 PMFBP1Q8TBY8 1022 aa18.07■□□□□ 0.48
SRGAP2C-204ENST00000613462 NRKQ7Z2Y5 1582 aa18.07■□□□□ 0.48
SRGAP2C-204ENST00000613462 BRD4O60885 1362 aaPredicted RBP18.06■□□□□ 0.48
SRGAP2C-204ENST00000613462 COL22A1Q8NFW1 1626 aaPredicted RBP18.06■□□□□ 0.48
SRGAP2C-204ENST00000613462 PSME1Q06323 249 aa18.06■□□□□ 0.48
SRGAP2C-204ENST00000613462 SBNO1A3KN83 1393 aa18.05■□□□□ 0.48
SRGAP2C-204ENST00000613462 ACEP12821 1306 aa18.05■□□□□ 0.48
SRGAP2C-204ENST00000613462 CABP1Q9NZU7 370 aa18.05■□□□□ 0.48
SRGAP2C-204ENST00000613462 LRRC59Q96AG4 307 aaKnown RBP18.04■□□□□ 0.48
SRGAP2C-204ENST00000613462 CPSF1Q10570 1443 aaKnown RBP18.04■□□□□ 0.48
SRGAP2C-204ENST00000613462 TNS3Q68CZ2 1445 aa18.04■□□□□ 0.48
SRGAP2C-204ENST00000613462 KRT28Q7Z3Y7 464 aa18.03■□□□□ 0.48
SRGAP2C-204ENST00000613462 TMC1Q8TDI8 760 aa18.03■□□□□ 0.48
SRGAP2C-204ENST00000613462 ZNF692Q9BU19 519 aaPredicted RBP18.03■□□□□ 0.48
SRGAP2C-204ENST00000613462 TERF2IPQ9NYB0 399 aa18.03■□□□□ 0.48
SRGAP2C-204ENST00000613462 USP6P35125 1406 aa18.03■□□□□ 0.48
SRGAP2C-204ENST00000613462 JCADQ9P266 1359 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms