RNA–Protein interactions for RNA: ENST00000613296.4

ALMS1-206, Transcript of ALMS1, centrosome and basal body associated protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ALMS1, Length 12,925 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-206ENST00000613296 BRPF1P55201 1214 aaPredicted RBP10.02□□□□□ -0.8
ALMS1-206ENST00000613296 SDF4Q9BRK5 362 aa10.02□□□□□ -0.8
ALMS1-206ENST00000613296 PIP4K2AP48426 406 aaPredicted RBP10.02□□□□□ -0.8
ALMS1-206ENST00000613296 CENPQQ7L2Z9 268 aaPredicted RBP10.02□□□□□ -0.81
ALMS1-206ENST00000613296 CCDC102AQ96A19 550 aa10.02□□□□□ -0.81
ALMS1-206ENST00000613296 IFIT2P09913 472 aaKnown RBP10.01□□□□□ -0.81
ALMS1-206ENST00000613296 TSHZ2Q9NRE2 1034 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 PHLDB1Q86UU1 1377 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 GOLGA3Q08378 1498 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 CLGNO14967 610 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 XBP1P17861 261 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 CEP162Q5TB80 1403 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 DDX11Q96FC9 970 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 C9orf78Q9NZ63 289 aaPredicted RBP10.01□□□□□ -0.81
ALMS1-206ENST00000613296 FILIP1LQ4L180 1135 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 PUS7Q96PZ0 661 aaKnown RBP10.01□□□□□ -0.81
ALMS1-206ENST00000613296 RBM10P98175 930 aaKnown RBP10.01□□□□□ -0.81
ALMS1-206ENST00000613296 PPM1FP49593 454 aaPredicted RBP10.01□□□□□ -0.81
ALMS1-206ENST00000613296 CCNB3Q8WWL7 1395 aa10.01□□□□□ -0.81
ALMS1-206ENST00000613296 RALYLQ86SE5 291 aaKnown RBP10□□□□□ -0.81
ALMS1-206ENST00000613296 DESP17661 470 aa10□□□□□ -0.81
ALMS1-206ENST00000613296 IBSPP21815 317 aaPredicted RBP10□□□□□ -0.81
ALMS1-206ENST00000613296 GRIPAP1Q4V328 841 aa10□□□□□ -0.81
ALMS1-206ENST00000613296 CFAP45Q9UL16 551 aa10□□□□□ -0.81
ALMS1-206ENST00000613296 TXLNAP40222 546 aa10□□□□□ -0.81
ALMS1-206ENST00000613296 MTMR7Q9Y216 660 aa10□□□□□ -0.81
ALMS1-206ENST00000613296 PDCL3Q9H2J4 239 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 SYTL4Q96C24 671 aaPredicted RBP9.99□□□□□ -0.81
ALMS1-206ENST00000613296 TERF2IPQ9NYB0 399 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 IKQ13123 557 aaPredicted RBP9.99□□□□□ -0.81
ALMS1-206ENST00000613296 SIN3AQ96ST3 1273 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 EEA1Q15075 1411 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 FMNL2Q96PY5 1086 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 ROCK1Q13464 1354 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 TMCO3Q6UWJ1 677 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 SHTN1A0MZ66 631 aa9.99□□□□□ -0.81
ALMS1-206ENST00000613296 LRRFIP2Q9Y608 721 aaKnown RBP9.99□□□□□ -0.81
ALMS1-206ENST00000613296 NUCB2P80303 420 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 SEPT6Q14141 434 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.98□□□□□ -0.813e-6■■■□□ 18.8
ALMS1-206ENST00000613296 LETM1O95202 739 aaPredicted RBP9.98□□□□□ -0.81
ALMS1-206ENST00000613296 RNF214Q8ND24 703 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 PPP1R1BQ9UD71 204 aaPredicted RBP9.98□□□□□ -0.81
ALMS1-206ENST00000613296 TTC5Q8N0Z6 440 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 PDE4AP27815 886 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 TSPY26PQ9H489 355 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 IPO4Q8TEX9 1081 aaKnown RBP9.98□□□□□ -0.81
ALMS1-206ENST00000613296 EIF4G1Q04637 1599 aaKnown RBP9.98□□□□□ -0.81
ALMS1-206ENST00000613296 FYB1O15117 783 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 ZWINTO95229 277 aa9.98□□□□□ -0.81
ALMS1-206ENST00000613296 PPFIBP1Q86W92 1011 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 AMPHP49418 695 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 DHX8Q14562 1220 aaKnown RBP9.97□□□□□ -0.81
ALMS1-206ENST00000613296 MAP2K1Q02750 393 aaPredicted RBP9.97□□□□□ -0.81
ALMS1-206ENST00000613296 NINLQ9Y2I6 1382 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 MRE11P49959 708 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 STIM1Q13586 685 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 SPC24Q8NBT2 197 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 ANAPC15P60006 121 aa9.97□□□□□ -0.81
ALMS1-206ENST00000613296 GPATCH11Q8N954 259 aa9.96□□□□□ -0.81
ALMS1-206ENST00000613296 DNAJC2Q99543 621 aaKnown RBP9.96□□□□□ -0.82
ALMS1-206ENST00000613296 SART3Q15020 963 aaKnown RBP9.96□□□□□ -0.82
ALMS1-206ENST00000613296 UQCRHLA0A096LP55 91 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 UQCRHP07919 91 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 SERPINC1P01008 464 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 AEBP2Q6ZN18 517 aaPredicted RBP9.95□□□□□ -0.82
ALMS1-206ENST00000613296 ERCC6Q03468 1493 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 C1orf141Q5JVX7 400 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 GGT6Q6P531 493 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 NECTIN2Q92692 538 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 ERC2O15083 957 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 CAVIN1Q6NZI2 390 aaKnown RBP9.95□□□□□ -0.82
ALMS1-206ENST00000613296 TRIM21P19474 475 aaKnown RBP9.95□□□□□ -0.82
ALMS1-206ENST00000613296 ANKRD18BA2A2Z9 1011 aa9.95□□□□□ -0.82
ALMS1-206ENST00000613296 JAKMIP3Q5VZ66 844 aa9.94□□□□□ -0.82
ALMS1-206ENST00000613296 HSPA5P11021 654 aaKnown RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 UBE4AQ14139 1066 aa9.94□□□□□ -0.82
ALMS1-206ENST00000613296 FAM177A1Q8N128 213 aaPredicted RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 CCDC113Q9H0I3 377 aa9.94□□□□□ -0.82
ALMS1-206ENST00000613296 FOXD1Q16676 465 aa9.94□□□□□ -0.82
ALMS1-206ENST00000613296 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 INTS3Q68E01 1043 aaKnown RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 SMC1AQ14683 1233 aaKnown RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 TNNT1P13805 278 aa9.94□□□□□ -0.82
ALMS1-206ENST00000613296 ZNF526Q8TF50 670 aaPredicted RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 TANGO6Q9C0B7 1094 aa9.94□□□□□ -0.82
ALMS1-206ENST00000613296 SSR1P43307 286 aaKnown RBP9.94□□□□□ -0.82
ALMS1-206ENST00000613296 PDE3BQ13370 1112 aa9.93□□□□□ -0.82
ALMS1-206ENST00000613296 RRP7AQ9Y3A4 280 aaKnown RBP9.93□□□□□ -0.82
ALMS1-206ENST00000613296 ZKSCAN2Q63HK3 967 aa9.93□□□□□ -0.82
ALMS1-206ENST00000613296 WDR70Q9NW82 654 aa9.93□□□□□ -0.82
ALMS1-206ENST00000613296 G3BP1Q13283 466 aaKnown RBP eCLIP9.93□□□□□ -0.82
ALMS1-206ENST00000613296 PSMA5P28066 241 aa9.93□□□□□ -0.82
ALMS1-206ENST00000613296 TIGD1Q96MW7 591 aa9.92□□□□□ -0.82
ALMS1-206ENST00000613296 CRACR2AQ9BSW2 395 aa9.92□□□□□ -0.82
ALMS1-206ENST00000613296 NGDNQ8NEJ9 315 aaKnown RBP9.92□□□□□ -0.82
ALMS1-206ENST00000613296 BMS1Q14692 1282 aaKnown RBP9.92□□□□□ -0.82
ALMS1-206ENST00000613296 CCDC27Q2M243 656 aa9.92□□□□□ -0.82
ALMS1-206ENST00000613296 ZNF396Q96N95 335 aaPredicted RBP9.92□□□□□ -0.82
ALMS1-206ENST00000613296 MICALCLQ6ZW33 695 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms