RNA–Protein interactions for RNA: ENST00000613177.1

TARDBP-214, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-214ENST00000613177 HLA-CQ95604 372 aa10.69□□□□□ -0.7
TARDBP-214ENST00000613177 USP46P62068 366 aa10.68□□□□□ -0.7
TARDBP-214ENST00000613177 TOR4AQ9NXH8 423 aa10.68□□□□□ -0.7
TARDBP-214ENST00000613177 GPCPD1Q9NPB8 672 aa10.67□□□□□ -0.7
TARDBP-214ENST00000613177 FAM217BQ9NTX9 383 aaPredicted RBP10.67□□□□□ -0.7
TARDBP-214ENST00000613177 HOXA2O43364 376 aa10.66□□□□□ -0.7
TARDBP-214ENST00000613177 DXOO77932 396 aaKnown RBP10.66□□□□□ -0.7
TARDBP-214ENST00000613177 CLCN1P35523 988 aa10.66□□□□□ -0.7
TARDBP-214ENST00000613177 USB1Q9BQ65 265 aaKnown RBP10.66□□□□□ -0.7
TARDBP-214ENST00000613177 POTECB2RU33 542 aa10.65□□□□□ -0.7
TARDBP-214ENST00000613177 ST8SIA5O15466 376 aa10.64□□□□□ -0.71
TARDBP-214ENST00000613177 AAASQ9NRG9 546 aa10.64□□□□□ -0.71
TARDBP-214ENST00000613177 CRIPAKQ8N1N5 446 aa10.63□□□□□ -0.71
TARDBP-214ENST00000613177 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
TARDBP-214ENST00000613177 AVPP01185 164 aa10.62□□□□□ -0.71
TARDBP-214ENST00000613177 GUCA2AQ02747 115 aa10.62□□□□□ -0.71
TARDBP-214ENST00000613177 TRIM32Q13049 653 aa10.62□□□□□ -0.71
TARDBP-214ENST00000613177 REPIN1Q9BWE0 567 aaKnown RBP10.62□□□□□ -0.71
TARDBP-214ENST00000613177 ZBTB24O43167 697 aaPredicted RBP10.61□□□□□ -0.71
TARDBP-214ENST00000613177 WNT7AO00755 349 aa10.6□□□□□ -0.71
TARDBP-214ENST00000613177 CYP4X1Q8N118 509 aa10.6□□□□□ -0.71
TARDBP-214ENST00000613177 BARGINQ6ZT62 677 aa10.58□□□□□ -0.72
TARDBP-214ENST00000613177 ZMYND10O75800 440 aa10.56□□□□□ -0.72
TARDBP-214ENST00000613177 SYMPKQ92797 1274 aaKnown RBP10.56□□□□□ -0.72
TARDBP-214ENST00000613177 DACH1Q9UI36 760 aa10.56□□□□□ -0.72
TARDBP-214ENST00000613177 JUNDP17535 347 aa10.55□□□□□ -0.72
TARDBP-214ENST00000613177 SMCPP49901 116 aaPredicted RBP10.55□□□□□ -0.72
TARDBP-214ENST00000613177 NUTM1Q86Y26 1132 aa10.55□□□□□ -0.72
TARDBP-214ENST00000613177 SMPD1P17405 629 aa10.54□□□□□ -0.72
TARDBP-214ENST00000613177 CTC1Q2NKJ3 1217 aa10.54□□□□□ -0.72
TARDBP-214ENST00000613177 RETREG3Q86VR2 466 aa10.54□□□□□ -0.72
TARDBP-214ENST00000613177 KRI1Q8N9T8 703 aaKnown RBP10.54□□□□□ -0.72
TARDBP-214ENST00000613177 MRGPRX2Q96LB1 330 aa10.54□□□□□ -0.72
TARDBP-214ENST00000613177 PCDHGC3Q9UN70 934 aa10.54□□□□□ -0.72
TARDBP-214ENST00000613177 TTC24A2A3L6 582 aaPredicted RBP10.53□□□□□ -0.72
TARDBP-214ENST00000613177 SSTR3P32745 418 aaPredicted RBP10.53□□□□□ -0.72
TARDBP-214ENST00000613177 SKOR1P84550 965 aa10.53□□□□□ -0.72
TARDBP-214ENST00000613177 AMHR2Q16671 573 aa10.53□□□□□ -0.72
TARDBP-214ENST00000613177 SNIP1Q8TAD8 396 aaKnown RBP10.53□□□□□ -0.72
TARDBP-214ENST00000613177 ZC3H15Q8WU90 426 aaKnown RBP10.53□□□□□ -0.72
TARDBP-214ENST00000613177 FDX1P10109 184 aa10.52□□□□□ -0.73
TARDBP-214ENST00000613177 CCDC24Q8N4L8 307 aa10.52□□□□□ -0.73
TARDBP-214ENST00000613177 AXIN1O15169 862 aa10.51□□□□□ -0.73
TARDBP-214ENST00000613177 SPIRE2Q8WWL2 714 aa10.51□□□□□ -0.73
TARDBP-214ENST00000613177 J3QL48 77 aa10.5□□□□□ -0.73
TARDBP-214ENST00000613177 WNT7BP56706 349 aa10.5□□□□□ -0.73
TARDBP-214ENST00000613177 TTLL12Q14166 644 aaPredicted RBP10.49□□□□□ -0.73
TARDBP-214ENST00000613177 RC3H1Q5TC82 1133 aaKnown RBP10.49□□□□□ -0.73
TARDBP-214ENST00000613177 PTCRAQ6ISU1 281 aaPredicted RBP10.48□□□□□ -0.73
TARDBP-214ENST00000613177 GIGYF2Q6Y7W6 1299 aaKnown RBP10.48□□□□□ -0.73
TARDBP-214ENST00000613177 NUDT12Q9BQG2 462 aa10.48□□□□□ -0.73
TARDBP-214ENST00000613177 MOXD2PA6NHM9 499 aa10.47□□□□□ -0.73
TARDBP-214ENST00000613177 GMPR2Q9P2T1 348 aaKnown RBP10.47□□□□□ -0.73
TARDBP-214ENST00000613177 C6orf229H3BNL8 230 aa10.46□□□□□ -0.73
TARDBP-214ENST00000613177 NDUFV2P19404 249 aa10.46□□□□□ -0.73
TARDBP-214ENST00000613177 LCE2AQ5TA79 106 aaPredicted RBP10.46□□□□□ -0.73
TARDBP-214ENST00000613177 CCNYL3P0C7X3 344 aa10.43□□□□□ -0.74
TARDBP-214ENST00000613177 MS4A1P11836 297 aa10.43□□□□□ -0.74
TARDBP-214ENST00000613177 HPS1Q92902 700 aa10.43□□□□□ -0.74
TARDBP-214ENST00000613177 PTPRNQ16849 979 aa10.42□□□□□ -0.74
TARDBP-214ENST00000613177 PARP9Q8IXQ6 854 aa10.42□□□□□ -0.74
TARDBP-214ENST00000613177 BEGAINQ9BUH8 593 aa10.42□□□□□ -0.74
TARDBP-214ENST00000613177 C11orf95C9JLR9 678 aaPredicted RBP10.41□□□□□ -0.74
TARDBP-214ENST00000613177 SIAH2O43255 324 aa10.41□□□□□ -0.74
TARDBP-214ENST00000613177 TREML4Q6UXN2 200 aa10.41□□□□□ -0.74
TARDBP-214ENST00000613177 ATP13A2Q9NQ11 1180 aa10.41□□□□□ -0.74
TARDBP-214ENST00000613177 TRIM66O15016 1216 aa10.4□□□□□ -0.74
TARDBP-214ENST00000613177 GJA5P36382 358 aa10.4□□□□□ -0.74
TARDBP-214ENST00000613177 PRR7Q8TB68 274 aa10.4□□□□□ -0.74
TARDBP-214ENST00000613177 EVA1BQ9NVM1 165 aa10.4□□□□□ -0.74
TARDBP-214ENST00000613177 SPDYE5A6NIY4 337 aa10.39□□□□□ -0.75
TARDBP-214ENST00000613177 SH3BP2P78314 561 aa10.39□□□□□ -0.75
TARDBP-214ENST00000613177 MTMR2Q13614 643 aa10.39□□□□□ -0.75
TARDBP-214ENST00000613177 DESI1Q6ICB0 168 aa10.39□□□□□ -0.75
TARDBP-214ENST00000613177 TBC1D2Q9BYX2 928 aa10.39□□□□□ -0.75
TARDBP-214ENST00000613177 RSBN1LQ6PCB5 846 aaPredicted RBP10.38□□□□□ -0.75
TARDBP-214ENST00000613177 ALDH1A1P00352 501 aa10.37□□□□□ -0.75
TARDBP-214ENST00000613177 EHBP1Q8NDI1 1231 aa10.37□□□□□ -0.75
TARDBP-214ENST00000613177 UNC93B1Q9H1C4 597 aa10.37□□□□□ -0.75
TARDBP-214ENST00000613177 TRIM47Q96LD4 638 aa10.36□□□□□ -0.75
TARDBP-214ENST00000613177 SPTLC1O15269 473 aa10.35□□□□□ -0.75
TARDBP-214ENST00000613177 SNRPBP14678 240 aaKnown RBP10.35□□□□□ -0.75
TARDBP-214ENST00000613177 KCNH2Q12809 1159 aa10.35□□□□□ -0.75
TARDBP-214ENST00000613177 AK7Q96M32 723 aa10.35□□□□□ -0.75
TARDBP-214ENST00000613177 PCDHB15Q9Y5E8 787 aa10.35□□□□□ -0.75
TARDBP-214ENST00000613177 DIXDC1Q155Q3 683 aa10.34□□□□□ -0.75
TARDBP-214ENST00000613177 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
TARDBP-214ENST00000613177 BAP1Q92560 729 aa10.33□□□□□ -0.76
TARDBP-214ENST00000613177 SENP2Q9HC62 589 aa10.33□□□□□ -0.76
TARDBP-214ENST00000613177 CFAP99D6REC4 459 aa10.32□□□□□ -0.76
TARDBP-214ENST00000613177 LINC01559Q495D7 138 aa10.32□□□□□ -0.76
TARDBP-214ENST00000613177 LYPD8Q6UX82 237 aa10.32□□□□□ -0.76
TARDBP-214ENST00000613177 ZNF511Q8NB15 262 aa10.31□□□□□ -0.76
TARDBP-214ENST00000613177 WFS1O76024 890 aa10.3□□□□□ -0.76
TARDBP-214ENST00000613177 HRCP23327 699 aa10.3□□□□□ -0.76
TARDBP-214ENST00000613177 PRPF38BQ5VTL8 546 aaKnown RBP10.29□□□□□ -0.76
TARDBP-214ENST00000613177 ZBTB3Q9H5J0 574 aa10.29□□□□□ -0.76
TARDBP-214ENST00000613177 TLL2Q9Y6L7 1015 aa10.29□□□□□ -0.76
TARDBP-214ENST00000613177 LCE2CQ5TA81 110 aa10.28□□□□□ -0.76
TARDBP-214ENST00000613177 RIC3Q7Z5B4 369 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms