RNA–Protein interactions for RNA: ENST00000612828.4

CNTNAP3B-211, Transcript of contactin associated protein like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNTNAP3B, Length 7,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3B-211ENST00000612828 KIF16BQ96L93 1317 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CCDC112Q8NEF3 446 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 MYO6Q9UM54 1294 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ECM2O94769 699 aaPredicted RBP13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PDILTQ8N807 584 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 TRIM29Q14134 588 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 SEPT8Q92599 483 aa13.05□□□□□ -0.32
CNTNAP3B-211ENST00000612828 LETM1O95202 739 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP3B-211ENST00000612828 MAFGO15525 162 aa13.04□□□□□ -0.32
CNTNAP3B-211ENST00000612828 EIF3JO75822 258 aaKnown RBP13.04□□□□□ -0.32
CNTNAP3B-211ENST00000612828 KIF3AQ9Y496 699 aa13.04□□□□□ -0.32
CNTNAP3B-211ENST00000612828 APBB1IPQ7Z5R6 666 aaPredicted RBP13.04□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CCDC27Q2M243 656 aa13.04□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ATP2C2O75185 946 aa13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 STAMBPO95630 424 aa13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 TCERG1O14776 1098 aaKnown RBP13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CRBNQ96SW2 442 aa13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 EIF4G1Q04637 1599 aaKnown RBP13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 NFXL1Q6ZNB6 911 aa13.03□□□□□ -0.32
CNTNAP3B-211ENST00000612828 RBM33Q96EV2 1170 aaKnown RBP13.02□□□□□ -0.32
CNTNAP3B-211ENST00000612828 ZHX3Q9H4I2 956 aa13.02□□□□□ -0.32
CNTNAP3B-211ENST00000612828 GBP4Q96PP9 640 aa13.02□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PPP1R12AO14974 1030 aaPredicted RBP13.02□□□□□ -0.32
CNTNAP3B-211ENST00000612828 CSPP1Q1MSJ5 1256 aa13.02□□□□□ -0.32
CNTNAP3B-211ENST00000612828 PPP1R9BQ96SB3 815 aa13.02□□□□□ -0.32
CNTNAP3B-211ENST00000612828 BRPF1P55201 1214 aaPredicted RBP13.02□□□□□ -0.33
CNTNAP3B-211ENST00000612828 GTPBP4Q9BZE4 634 aaKnown RBP13.02□□□□□ -0.33
CNTNAP3B-211ENST00000612828 CCDC146Q8IYE0 955 aa13.01□□□□□ -0.33
CNTNAP3B-211ENST00000612828 PABPN1LA6NDY0 278 aaKnown RBP13.01□□□□□ -0.33
CNTNAP3B-211ENST00000612828 KTN1Q86UP2 1357 aaKnown RBP13.01□□□□□ -0.33
CNTNAP3B-211ENST00000612828 FMN1Q68DA7 1419 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 NUP155O75694 1391 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 CLUAP1Q96AJ1 413 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 RNF187Q5TA31 235 aaPredicted RBP13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 INCENPQ9NQS7 918 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 ST20-MTHFSA0A0A6YYL1 179 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 FAM184BQ9ULE4 1060 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 CCDC181Q5TID7 509 aa13□□□□□ -0.33
CNTNAP3B-211ENST00000612828 STK26Q9P289 416 aa12.99□□□□□ -0.33
CNTNAP3B-211ENST00000612828 IPO8O15397 1037 aaKnown RBP12.99□□□□□ -0.33
CNTNAP3B-211ENST00000612828 PDE4AP27815 886 aa12.99□□□□□ -0.33
CNTNAP3B-211ENST00000612828 HSP90B2PQ58FF3 399 aa12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 ZNF354CQ86Y25 554 aa12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 FAM193AP78312 1265 aa12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 SF3B2Q13435 895 aaKnown RBP12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 ACRBPQ8NEB7 543 aa12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 NUCB2P80303 420 aa12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 RILPL2Q969X0 211 aa12.98□□□□□ -0.33
CNTNAP3B-211ENST00000612828 SCLT1Q96NL6 688 aa12.97□□□□□ -0.33
CNTNAP3B-211ENST00000612828 E9PSI1 815 aa12.97□□□□□ -0.33
CNTNAP3B-211ENST00000612828 CHMP4CQ96CF2 233 aa12.97□□□□□ -0.33
CNTNAP3B-211ENST00000612828 UBE4AQ14139 1066 aa12.97□□□□□ -0.33
CNTNAP3B-211ENST00000612828 SATB1Q01826 763 aa12.97□□□□□ -0.33
CNTNAP3B-211ENST00000612828 CHMP4BQ9H444 224 aaKnown RBP12.97□□□□□ -0.33
CNTNAP3B-211ENST00000612828 CT47B1P0C2W7 299 aaPredicted RBP12.96□□□□□ -0.33
CNTNAP3B-211ENST00000612828 MORC1Q86VD1 984 aa12.96□□□□□ -0.33
CNTNAP3B-211ENST00000612828 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
CNTNAP3B-211ENST00000612828 ROCK2O75116 1388 aaKnown RBP12.96□□□□□ -0.34
CNTNAP3B-211ENST00000612828 FANCIQ9NVI1 1328 aa12.96□□□□□ -0.34
CNTNAP3B-211ENST00000612828 LEKR1Q6ZMV7 388 aa12.95□□□□□ -0.34
CNTNAP3B-211ENST00000612828 KRT18P05783 430 aaKnown RBP12.95□□□□□ -0.34
CNTNAP3B-211ENST00000612828 BIRC2Q13490 618 aa12.95□□□□□ -0.34
CNTNAP3B-211ENST00000612828 SART3Q15020 963 aaKnown RBP12.95□□□□□ -0.34
CNTNAP3B-211ENST00000612828 SSX2IPQ9Y2D8 614 aa12.95□□□□□ -0.34
CNTNAP3B-211ENST00000612828 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
CNTNAP3B-211ENST00000612828 RNF20Q5VTR2 975 aa12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CFAP45Q9UL16 551 aa12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 KIF20AO95235 890 aa12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 SMC4Q9NTJ3 1288 aa12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 RBM5P52756 815 aaKnown RBP eCLIP12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ERICH2A1L162 156 aa12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ITPRIPQ8IWB1 547 aa12.94□□□□□ -0.34
CNTNAP3B-211ENST00000612828 PHLDB1Q86UU1 1377 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ERLIN2O94905 339 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 NUTM2FA1L443 756 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CCDC113Q9H0I3 377 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ZNF652Q9Y2D9 606 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 HNRNPMP52272 730 aaKnown RBP eCLIP12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ZBED9Q6R2W3 1325 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 LRSAM1Q6UWE0 723 aa12.93□□□□□ -0.34
CNTNAP3B-211ENST00000612828 GOLGA6L7A0A1B0GV03 622 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ERCC3P19447 782 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 EP400NLQ6ZTU2 488 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 ERCC5P28715 1186 aaPredicted RBP12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 KIF3BO15066 747 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 TTLL12Q14166 644 aaPredicted RBP12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 MRE11P49959 708 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CDK5RAP3Q96JB5 506 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 FAM177BA6PVY3 158 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 FAM13BQ9NYF5 915 aa12.92□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CCDC184Q52MB2 194 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CFAP58Q5T655 872 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 CCDC39Q9UFE4 941 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 RRP7AQ9Y3A4 280 aaKnown RBP12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 RRP1P56182 461 aaKnown RBP12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 DESP17661 470 aa12.91□□□□□ -0.34
CNTNAP3B-211ENST00000612828 FAM161AQ3B820 660 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms