RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 BRWD3Q6RI45 1802 aa11.51□□□□□ -0.57
PTCHD3P1-201ENST00000612350 SF3B2Q13435 895 aaKnown RBP11.51□□□□□ -0.57
PTCHD3P1-201ENST00000612350 POLA2Q14181 598 aa11.51□□□□□ -0.57
PTCHD3P1-201ENST00000612350 UNC13BO14795 1591 aa11.5□□□□□ -0.57
PTCHD3P1-201ENST00000612350 COL22A1Q8NFW1 1626 aaPredicted RBP11.49□□□□□ -0.57
PTCHD3P1-201ENST00000612350 XRN1Q8IZH2 1706 aaKnown RBP11.49□□□□□ -0.57
PTCHD3P1-201ENST00000612350 MYOM3Q5VTT5 1437 aa11.49□□□□□ -0.57
PTCHD3P1-201ENST00000612350 GLI3P10071 1580 aa11.49□□□□□ -0.57
PTCHD3P1-201ENST00000612350 ABCC5O15440 1437 aa11.48□□□□□ -0.57
PTCHD3P1-201ENST00000612350 MYOM2P54296 1465 aa11.48□□□□□ -0.57
PTCHD3P1-201ENST00000612350 C1orf167Q5SNV9 1468 aa11.48□□□□□ -0.57
PTCHD3P1-201ENST00000612350 SPHKAPQ2M3C7 1700 aa11.48□□□□□ -0.57
PTCHD3P1-201ENST00000612350 MARF1Q9Y4F3 1742 aaKnown RBP11.47□□□□□ -0.57
PTCHD3P1-201ENST00000612350 RPRD2Q5VT52 1461 aaKnown RBP11.47□□□□□ -0.57
PTCHD3P1-201ENST00000612350 RALGAPBQ86X10 1494 aa11.47□□□□□ -0.57
PTCHD3P1-201ENST00000612350 ADGRL3Q9HAR2 1447 aa11.47□□□□□ -0.57
PTCHD3P1-201ENST00000612350 ORAI2Q96SN7 254 aa11.46□□□□□ -0.57
PTCHD3P1-201ENST00000612350 RBM42Q9BTD8 480 aaKnown RBP11.46□□□□□ -0.57
PTCHD3P1-201ENST00000612350 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.46□□□□□ -0.58
PTCHD3P1-201ENST00000612350 CHGAP10645 457 aaKnown RBP11.45□□□□□ -0.58
PTCHD3P1-201ENST00000612350 UNC5CLQ8IV45 518 aa11.45□□□□□ -0.58
PTCHD3P1-201ENST00000612350 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
PTCHD3P1-201ENST00000612350 NALCNQ8IZF0 1738 aa11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 CROCC2H7BZ55 1655 aa11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 ONECUT3O60422 494 aaPredicted RBP11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 BAG6P46379 1132 aa11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 R3HDM1Q15032 1099 aaKnown RBP11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 POTEHQ6S545 545 aa11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 SLIT2O94813 1529 aa11.44□□□□□ -0.58
PTCHD3P1-201ENST00000612350 NRXN3Q9Y4C0 1643 aa11.43□□□□□ -0.58
PTCHD3P1-201ENST00000612350 METP08581 1390 aa11.42□□□□□ -0.58
PTCHD3P1-201ENST00000612350 EN1Q05925 392 aaPredicted RBP11.41□□□□□ -0.58
PTCHD3P1-201ENST00000612350 KRT27Q7Z3Y8 459 aa11.41□□□□□ -0.58
PTCHD3P1-201ENST00000612350 DAPK1P53355 1430 aa11.4□□□□□ -0.58
PTCHD3P1-201ENST00000612350 ATF5Q9Y2D1 282 aaPredicted RBP11.39□□□□□ -0.59
PTCHD3P1-201ENST00000612350 ANKRD30AQ9BXX3 1397 aa11.39□□□□□ -0.59
PTCHD3P1-201ENST00000612350 SENP3-EIF4A1A0A087X0R7 540 aa11.38□□□□□ -0.59
PTCHD3P1-201ENST00000612350 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
PTCHD3P1-201ENST00000612350 ZBTB22O15209 634 aa11.37□□□□□ -0.59
PTCHD3P1-201ENST00000612350 VPS72Q15906 364 aa11.37□□□□□ -0.59
PTCHD3P1-201ENST00000612350 CHIC2Q9UKJ5 165 aa11.37□□□□□ -0.59
PTCHD3P1-201ENST00000612350 PXDNQ92626 1479 aa11.37□□□□□ -0.59
PTCHD3P1-201ENST00000612350 ZNF784Q8NCA9 323 aaPredicted RBP11.36□□□□□ -0.59
PTCHD3P1-201ENST00000612350 NPHP3Q7Z494 1330 aa11.35□□□□□ -0.59
PTCHD3P1-201ENST00000612350 DISP2A7MBM2 1401 aa11.35□□□□□ -0.59
PTCHD3P1-201ENST00000612350 ZBTB12Q9Y330 459 aaPredicted RBP11.35□□□□□ -0.59
PTCHD3P1-201ENST00000612350 PTPN23Q9H3S7 1636 aa11.35□□□□□ -0.59
PTCHD3P1-201ENST00000612350 XPCQ01831 940 aaPredicted RBP11.34□□□□□ -0.59
PTCHD3P1-201ENST00000612350 EZH2Q15910 746 aaKnown RBP11.34□□□□□ -0.59
PTCHD3P1-201ENST00000612350 E9PCH4 1651 aa11.33□□□□□ -0.6
PTCHD3P1-201ENST00000612350 RGPD1P0DJD0 1748 aa11.33□□□□□ -0.6
PTCHD3P1-201ENST00000612350 FOXO3O43524 673 aa11.33□□□□□ -0.6
PTCHD3P1-201ENST00000612350 C1QTNF8P60827 252 aa11.33□□□□□ -0.6
PTCHD3P1-201ENST00000612350 CAMKK2Q96RR4 588 aa11.33□□□□□ -0.6
PTCHD3P1-201ENST00000612350 ROBO2Q9HCK4 1378 aa11.32□□□□□ -0.6
PTCHD3P1-201ENST00000612350 ESCO1Q5FWF5 840 aa11.32□□□□□ -0.6
PTCHD3P1-201ENST00000612350 ADGRL2O95490 1459 aa11.32□□□□□ -0.6
PTCHD3P1-201ENST00000612350 SPATA31A3Q5VYP0 1347 aa11.31□□□□□ -0.6
PTCHD3P1-201ENST00000612350 IQGAP3Q86VI3 1631 aa11.31□□□□□ -0.6
PTCHD3P1-201ENST00000612350 USP32Q8NFA0 1604 aa11.31□□□□□ -0.6
PTCHD3P1-201ENST00000612350 NINLQ9Y2I6 1382 aa11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 TNS1Q9HBL0 1735 aaKnown RBP11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 ANKRD50Q9ULJ7 1429 aa11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 ATXN8OSP0DMR3 200 aa11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 FAM182BQ5T319 152 aa11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 CCDC9Q9Y3X0 531 aaKnown RBP11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 CAMTA1Q9Y6Y1 1673 aa11.3□□□□□ -0.6
PTCHD3P1-201ENST00000612350 NWD2Q9ULI1 1742 aa11.29□□□□□ -0.6
PTCHD3P1-201ENST00000612350 PLCH1Q4KWH8 1693 aa11.28□□□□□ -0.6
PTCHD3P1-201ENST00000612350 FAM98CQ17RN3 349 aaKnown RBP11.28□□□□□ -0.6
PTCHD3P1-201ENST00000612350 LRPPRCP42704 1394 aaKnown RBP11.28□□□□□ -0.6
PTCHD3P1-201ENST00000612350 PRAG1Q86YV5 1406 aa11.27□□□□□ -0.6
PTCHD3P1-201ENST00000612350 SPON1Q9HCB6 807 aa11.27□□□□□ -0.61
PTCHD3P1-201ENST00000612350 A0A0G2JS52 829 aa11.26□□□□□ -0.61
PTCHD3P1-201ENST00000612350 FAM83GA6ND36 823 aa11.26□□□□□ -0.61
PTCHD3P1-201ENST00000612350 KCNQ2O43526 872 aa11.26□□□□□ -0.61
PTCHD3P1-201ENST00000612350 MYT1Q01538 1121 aa11.26□□□□□ -0.61
PTCHD3P1-201ENST00000612350 CABLES1Q8TDN4 633 aa11.26□□□□□ -0.61
PTCHD3P1-201ENST00000612350 PPP1R1BQ9UD71 204 aaPredicted RBP11.26□□□□□ -0.61
PTCHD3P1-201ENST00000612350 ZNF326Q5BKZ1 582 aaKnown RBP11.25□□□□□ -0.61
PTCHD3P1-201ENST00000612350 PARD3Q8TEW0 1356 aa11.25□□□□□ -0.61
PTCHD3P1-201ENST00000612350 HFM1A2PYH4 1435 aa11.25□□□□□ -0.61
PTCHD3P1-201ENST00000612350 TRIM37O94972 964 aa11.24□□□□□ -0.61
PTCHD3P1-201ENST00000612350 NEXMIFQ5QGS0 1516 aa11.24□□□□□ -0.61
PTCHD3P1-201ENST00000612350 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
PTCHD3P1-201ENST00000612350 RREB1Q92766 1687 aa11.24□□□□□ -0.61
PTCHD3P1-201ENST00000612350 KRT28Q7Z3Y7 464 aa11.23□□□□□ -0.61
PTCHD3P1-201ENST00000612350 VPS8Q8N3P4 1428 aa11.23□□□□□ -0.61
PTCHD3P1-201ENST00000612350 NUP188Q5SRE5 1749 aa11.23□□□□□ -0.61
PTCHD3P1-201ENST00000612350 NRAPQ86VF7 1730 aa11.23□□□□□ -0.61
PTCHD3P1-201ENST00000612350 APBA3O96018 575 aa11.22□□□□□ -0.61
PTCHD3P1-201ENST00000612350 NBPF8Q3BBV2 869 aa11.22□□□□□ -0.61
PTCHD3P1-201ENST00000612350 NBPF14Q5TI25 921 aa11.22□□□□□ -0.61
PTCHD3P1-201ENST00000612350 CHD4Q14839 1912 aa11.21□□□□□ -0.61
PTCHD3P1-201ENST00000612350 THSD7AQ9UPZ6 1657 aa11.21□□□□□ -0.61
PTCHD3P1-201ENST00000612350 ADGRB2O60241 1585 aa11.21□□□□□ -0.61
PTCHD3P1-201ENST00000612350 NUTM2FA1L443 756 aa11.21□□□□□ -0.61
PTCHD3P1-201ENST00000612350 HAP1P54257 671 aaPredicted RBP11.21□□□□□ -0.61
PTCHD3P1-201ENST00000612350 CCDC144AA2RUR9 1427 aa11.2□□□□□ -0.62
PTCHD3P1-201ENST00000612350 SPATA31A5Q5VU36 1347 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms