RNA–Protein interactions for RNA: ENST00000612223.4

SYNRG-217, Transcript of synergin gamma, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNRG, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNRG-217ENST00000612223 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
SYNRG-217ENST00000612223 ERC2O15083 957 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 BICD2Q8TD16 824 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 TBC1D2BQ9UPU7 963 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 PATL2C9JE40 543 aaKnown RBP17.47■□□□□ 0.39
SYNRG-217ENST00000612223 NAP1L1P55209 391 aaKnown RBP17.47■□□□□ 0.39
SYNRG-217ENST00000612223 RBM19Q9Y4C8 960 aaKnown RBP17.47■□□□□ 0.39
SYNRG-217ENST00000612223 HSP90AB4PQ58FF6 505 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 CABP4P57796 275 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 CCDC70Q6NSX1 233 aa17.47■□□□□ 0.39
SYNRG-217ENST00000612223 GNAI1P63096 354 aa17.46■□□□□ 0.39
SYNRG-217ENST00000612223 BRMS1Q9HCU9 246 aa17.46■□□□□ 0.39
SYNRG-217ENST00000612223 DNAJC2Q99543 621 aaKnown RBP17.46■□□□□ 0.39
SYNRG-217ENST00000612223 UBTFL1P0CB47 393 aaPredicted RBP17.46■□□□□ 0.39
SYNRG-217ENST00000612223 DDX19BQ9UMR2 479 aa17.46■□□□□ 0.39
SYNRG-217ENST00000612223 STK11IPQ8N1F8 1099 aa17.46■□□□□ 0.39
SYNRG-217ENST00000612223 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
SYNRG-217ENST00000612223 EPS15P42566 896 aa17.45■□□□□ 0.38
SYNRG-217ENST00000612223 CRBNQ96SW2 442 aa17.45■□□□□ 0.38
SYNRG-217ENST00000612223 VPS37CA5D8V6 355 aaPredicted RBP17.45■□□□□ 0.38
SYNRG-217ENST00000612223 REC8O95072 547 aa17.45■□□□□ 0.38
SYNRG-217ENST00000612223 RRP12Q5JTH9 1297 aaKnown RBP17.45■□□□□ 0.38
SYNRG-217ENST00000612223 IBSPP21815 317 aaPredicted RBP17.45■□□□□ 0.38
SYNRG-217ENST00000612223 MIA2Q96PC5 1412 aa17.44■□□□□ 0.38
SYNRG-217ENST00000612223 DZIP1LQ8IYY4 767 aaKnown RBP17.44■□□□□ 0.38
SYNRG-217ENST00000612223 BICDL1Q6ZP65 573 aa17.44■□□□□ 0.38
SYNRG-217ENST00000612223 THEMISQ8N1K5 641 aaPredicted RBP17.44■□□□□ 0.38
SYNRG-217ENST00000612223 DDX49Q9Y6V7 483 aaKnown RBP17.44■□□□□ 0.38
SYNRG-217ENST00000612223 USP47Q96K76 1375 aa17.43■□□□□ 0.38
SYNRG-217ENST00000612223 RUNDC1Q96C34 613 aa17.43■□□□□ 0.38
SYNRG-217ENST00000612223 FAM161AQ3B820 660 aa17.43■□□□□ 0.38
SYNRG-217ENST00000612223 PAXIP1Q6ZW49 1069 aaPredicted RBP17.42■□□□□ 0.38
SYNRG-217ENST00000612223 SMG6Q86US8 1419 aaKnown RBP17.42■□□□□ 0.38
SYNRG-217ENST00000612223 PRDM2Q13029 1718 aa17.42■□□□□ 0.38
SYNRG-217ENST00000612223 TTC39AQ5SRH9 613 aa17.42■□□□□ 0.38
SYNRG-217ENST00000612223 SLC3A2P08195 630 aaKnown RBP17.42■□□□□ 0.38
SYNRG-217ENST00000612223 ZNF592Q92610 1267 aa17.41■□□□□ 0.38
SYNRG-217ENST00000612223 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
SYNRG-217ENST00000612223 XBP1P17861 261 aa17.41■□□□□ 0.38
SYNRG-217ENST00000612223 TNNT3P45378 269 aaPredicted RBP17.41■□□□□ 0.38
SYNRG-217ENST00000612223 XPCQ01831 940 aaPredicted RBP17.41■□□□□ 0.38
SYNRG-217ENST00000612223 FSD1Q9BTV5 496 aa17.41■□□□□ 0.38
SYNRG-217ENST00000612223 GNL3LQ9NVN8 582 aaKnown RBP17.4■□□□□ 0.38
SYNRG-217ENST00000612223 SMC3Q9UQE7 1217 aa17.4■□□□□ 0.38
SYNRG-217ENST00000612223 ANKLE2Q86XL3 938 aa17.39■□□□□ 0.37
SYNRG-217ENST00000612223 ZSCAN29Q8IWY8 852 aaPredicted RBP17.39■□□□□ 0.37
SYNRG-217ENST00000612223 AFAP1Q8N556 730 aa17.39■□□□□ 0.37
SYNRG-217ENST00000612223 SART3Q15020 963 aaKnown RBP17.39■□□□□ 0.37
SYNRG-217ENST00000612223 DDX11L8A8MPP1 907 aa17.39■□□□□ 0.37
SYNRG-217ENST00000612223 ZNF644Q9H582 1327 aaPredicted RBP17.38■□□□□ 0.37
SYNRG-217ENST00000612223 ATP2B1P20020 1258 aa17.38■□□□□ 0.37
SYNRG-217ENST00000612223 EXOC6Q8TAG9 804 aa17.38■□□□□ 0.37
SYNRG-217ENST00000612223 GAS2L2Q8NHY3 880 aa17.38■□□□□ 0.37
SYNRG-217ENST00000612223 WIZO95785 1651 aa17.38■□□□□ 0.37
SYNRG-217ENST00000612223 CCDC30Q5VVM6 783 aa17.38■□□□□ 0.37
SYNRG-217ENST00000612223 PRDM11Q9NQV5 511 aa17.38■□□□□ 0.37
SYNRG-217ENST00000612223 CDK5RAP3Q96JB5 506 aa17.37■□□□□ 0.37
SYNRG-217ENST00000612223 HSP90AB2PQ58FF8 381 aa17.37■□□□□ 0.37
SYNRG-217ENST00000612223 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
SYNRG-217ENST00000612223 OFD1O75665 1012 aa17.36■□□□□ 0.37
SYNRG-217ENST00000612223 GAPVD1Q14C86 1478 aa17.36■□□□□ 0.37
SYNRG-217ENST00000612223 MYL6BP14649 208 aa17.36■□□□□ 0.37
SYNRG-217ENST00000612223 SPG7Q9UQ90 795 aa17.36■□□□□ 0.37
SYNRG-217ENST00000612223 TOP2AP11388 1531 aaKnown RBP17.36■□□□□ 0.37
SYNRG-217ENST00000612223 KRT18P05783 430 aaKnown RBP17.35■□□□□ 0.37
SYNRG-217ENST00000612223 MPHOSPH10O00566 681 aaKnown RBP17.35■□□□□ 0.37
SYNRG-217ENST00000612223 INTS3Q68E01 1043 aaKnown RBP17.35■□□□□ 0.37
SYNRG-217ENST00000612223 CCDC158Q5M9N0 1113 aa17.35■□□□□ 0.37
SYNRG-217ENST00000612223 ARHGAP5Q13017 1502 aa17.35■□□□□ 0.37
SYNRG-217ENST00000612223 LNPKQ9C0E8 428 aa17.35■□□□□ 0.37
SYNRG-217ENST00000612223 SLC26A8Q96RN1 970 aa17.34■□□□□ 0.37
SYNRG-217ENST00000612223 SURF6O75683 361 aaKnown RBP17.34■□□□□ 0.37
SYNRG-217ENST00000612223 AQRO60306 1485 aaKnown RBP eCLIP17.34■□□□□ 0.373e-7■■■■■ 29
SYNRG-217ENST00000612223 CNTROBQ8N137 903 aa17.33■□□□□ 0.37
SYNRG-217ENST00000612223 RRP1P56182 461 aaKnown RBP17.33■□□□□ 0.36
SYNRG-217ENST00000612223 IPO9Q96P70 1041 aaKnown RBP17.33■□□□□ 0.36
SYNRG-217ENST00000612223 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
SYNRG-217ENST00000612223 HOMER1Q86YM7 354 aa17.33■□□□□ 0.36
SYNRG-217ENST00000612223 SASS6Q6UVJ0 657 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 NINLQ9Y2I6 1382 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 MTHFSP49914 203 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 CCDC73Q6ZRK6 1079 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 RAD54L2Q9Y4B4 1467 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 ADAMTS2O95450 1211 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 CLASRPQ8N2M8 674 aaKnown RBP17.32■□□□□ 0.36
SYNRG-217ENST00000612223 ATAD2BQ9ULI0 1458 aa17.32■□□□□ 0.36
SYNRG-217ENST00000612223 CHMP4BP1P59074 171 aa17.31■□□□□ 0.36
SYNRG-217ENST00000612223 SIL1Q9H173 461 aa17.31■□□□□ 0.36
SYNRG-217ENST00000612223 ZNF530Q6P9A1 599 aaPredicted RBP17.31■□□□□ 0.36
SYNRG-217ENST00000612223 CFAP70Q5T0N1 1121 aa17.3■□□□□ 0.36
SYNRG-217ENST00000612223 ZC3H6P61129 1189 aaKnown RBP17.3■□□□□ 0.36
SYNRG-217ENST00000612223 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
SYNRG-217ENST00000612223 MYCNP04198 464 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-217ENST00000612223 OLFM4Q6UX06 510 aa17.29■□□□□ 0.36
SYNRG-217ENST00000612223 TTLL12Q14166 644 aaPredicted RBP17.29■□□□□ 0.36
SYNRG-217ENST00000612223 ZHX3Q9H4I2 956 aa17.29■□□□□ 0.36
SYNRG-217ENST00000612223 PRKAR2BP31323 418 aa17.28■□□□□ 0.36
SYNRG-217ENST00000612223 PDILTQ8N807 584 aa17.28■□□□□ 0.36
SYNRG-217ENST00000612223 SPINK5Q9NQ38 1064 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms