RNA–Protein interactions for RNA: ENST00000611132.4

VPS36-207, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 1 (best) BASIC

Gene VPS36, Length 4,607 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-207ENST00000611132 AMER1Q5JTC6 1135 aaPredicted RBP17.91■□□□□ 0.46
VPS36-207ENST00000611132 NOB1Q9ULX3 412 aaKnown RBP17.91■□□□□ 0.46
VPS36-207ENST00000611132 RARSP54136 660 aaKnown RBP17.9■□□□□ 0.46
VPS36-207ENST00000611132 GNAI1P63096 354 aa17.9■□□□□ 0.46
VPS36-207ENST00000611132 ZSCAN30Q86W11 494 aa17.9■□□□□ 0.46
VPS36-207ENST00000611132 CAMSAP2Q08AD1 1489 aa17.9■□□□□ 0.46
VPS36-207ENST00000611132 TBC1D32Q96NH3 1257 aa17.9■□□□□ 0.46
VPS36-207ENST00000611132 UGGT2Q9NYU1 1516 aa17.89■□□□□ 0.46
VPS36-207ENST00000611132 PLEKHG5O94827 1062 aa17.89■□□□□ 0.46
VPS36-207ENST00000611132 PARD3Q8TEW0 1356 aa17.89■□□□□ 0.45
VPS36-207ENST00000611132 CC2D2AQ9P2K1 1620 aa17.89■□□□□ 0.45
VPS36-207ENST00000611132 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
VPS36-207ENST00000611132 ANO2Q9NQ90 1003 aa17.88■□□□□ 0.45
VPS36-207ENST00000611132 RALGAPBQ86X10 1494 aa17.87■□□□□ 0.45
VPS36-207ENST00000611132 CHD1LQ86WJ1 897 aa17.87■□□□□ 0.45
VPS36-207ENST00000611132 SLC12A5Q9H2X9 1139 aa17.87■□□□□ 0.45
VPS36-207ENST00000611132 CLCN1P35523 988 aa17.87■□□□□ 0.45
VPS36-207ENST00000611132 XRCC6P12956 609 aaKnown RBP eCLIP17.86■□□□□ 0.45
VPS36-207ENST00000611132 MINK1Q8N4C8 1332 aaPredicted RBP17.85■□□□□ 0.45
VPS36-207ENST00000611132 TAOK2Q9UL54 1235 aa17.85■□□□□ 0.45
VPS36-207ENST00000611132 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
VPS36-207ENST00000611132 THOC2Q8NI27 1593 aaKnown RBP17.85■□□□□ 0.45
VPS36-207ENST00000611132 GPATCH3Q96I76 525 aa17.84■□□□□ 0.45
VPS36-207ENST00000611132 IQGAP2Q13576 1575 aa17.84■□□□□ 0.45
VPS36-207ENST00000611132 C1orf115Q9H7X2 142 aa17.84■□□□□ 0.45
VPS36-207ENST00000611132 DISP3Q9P2K9 1392 aa17.83■□□□□ 0.45
VPS36-207ENST00000611132 HMGN5P82970 282 aaKnown RBP17.83■□□□□ 0.44
VPS36-207ENST00000611132 DIAPH3Q9NSV4 1193 aa17.83■□□□□ 0.44
VPS36-207ENST00000611132 TMEM132EQ6IEE7 984 aa17.83■□□□□ 0.44
VPS36-207ENST00000611132 ZNF771Q7L3S4 317 aaPredicted RBP17.83■□□□□ 0.44
VPS36-207ENST00000611132 HDGFP51858 240 aaKnown RBP17.82■□□□□ 0.44
VPS36-207ENST00000611132 TNPO1Q92973 898 aaKnown RBP17.82■□□□□ 0.44
VPS36-207ENST00000611132 NEK4P51957 841 aa17.82■□□□□ 0.44
VPS36-207ENST00000611132 CHMP4AQ9BY43 222 aa17.82■□□□□ 0.44
VPS36-207ENST00000611132 TSPY26PQ9H489 355 aa17.82■□□□□ 0.44
VPS36-207ENST00000611132 ARHGAP5Q13017 1502 aa17.82■□□□□ 0.44
VPS36-207ENST00000611132 UNC13AQ9UPW8 1703 aa17.81■□□□□ 0.44
VPS36-207ENST00000611132 TCOF1Q13428 1488 aaKnown RBP17.81■□□□□ 0.44
VPS36-207ENST00000611132 UQCRHLA0A096LP55 91 aa17.81■□□□□ 0.44
VPS36-207ENST00000611132 UQCRHP07919 91 aa17.81■□□□□ 0.44
VPS36-207ENST00000611132 HMOX1P09601 288 aa17.81■□□□□ 0.44
VPS36-207ENST00000611132 CABP2Q9NPB3 220 aa17.81■□□□□ 0.44
VPS36-207ENST00000611132 MCM2P49736 904 aa17.8■□□□□ 0.44
VPS36-207ENST00000611132 PANK2Q9BZ23 570 aa17.8■□□□□ 0.44
VPS36-207ENST00000611132 SYNJ2O15056 1496 aa17.8■□□□□ 0.44
VPS36-207ENST00000611132 GOLGA6L19H0YKK7 550 aa17.8■□□□□ 0.44
VPS36-207ENST00000611132 TMEM57Q8N5G2 664 aa17.8■□□□□ 0.44
VPS36-207ENST00000611132 COG3Q96JB2 828 aa17.79■□□□□ 0.44
VPS36-207ENST00000611132 PDCL3Q9H2J4 239 aa17.79■□□□□ 0.44
VPS36-207ENST00000611132 TPM4P67936 248 aa17.79■□□□□ 0.44
VPS36-207ENST00000611132 HDAC5Q9UQL6 1122 aa17.79■□□□□ 0.44
VPS36-207ENST00000611132 SNAPC4Q5SXM2 1469 aa17.78■□□□□ 0.44
VPS36-207ENST00000611132 SMC3Q9UQE7 1217 aa17.78■□□□□ 0.44
VPS36-207ENST00000611132 KIAA0586Q9BVV6 1533 aa17.78■□□□□ 0.44
VPS36-207ENST00000611132 HSP90B1P14625 803 aaKnown RBP17.77■□□□□ 0.44
VPS36-207ENST00000611132 KDM2BQ8NHM5 1336 aa17.77■□□□□ 0.43
VPS36-207ENST00000611132 PRKAR2BP31323 418 aa17.77■□□□□ 0.43
VPS36-207ENST00000611132 TNNT3P45378 269 aaPredicted RBP17.77■□□□□ 0.43
VPS36-207ENST00000611132 ZNF592Q92610 1267 aa17.77■□□□□ 0.43
VPS36-207ENST00000611132 BECN2A8MW95 431 aa17.76■□□□□ 0.43
VPS36-207ENST00000611132 CHMP3Q9Y3E7 222 aa17.76■□□□□ 0.43
VPS36-207ENST00000611132 AFAP1Q8N556 730 aa17.76■□□□□ 0.43
VPS36-207ENST00000611132 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.76■□□□□ 0.43
VPS36-207ENST00000611132 SSH1Q8WYL5 1049 aa17.76■□□□□ 0.43
VPS36-207ENST00000611132 PCDHB15Q9Y5E8 787 aa17.76■□□□□ 0.43
VPS36-207ENST00000611132 GPRASP1Q5JY77 1395 aa17.76■□□□□ 0.43
VPS36-207ENST00000611132 ZMYND15Q9H091 742 aa17.75■□□□□ 0.43
VPS36-207ENST00000611132 TWISTNBQ3B726 338 aaPredicted RBP17.75■□□□□ 0.43
VPS36-207ENST00000611132 TPM3P06753 285 aa17.75■□□□□ 0.43
VPS36-207ENST00000611132 RUFY2Q8WXA3 655 aa17.75■□□□□ 0.43
VPS36-207ENST00000611132 PLEKHH1Q9ULM0 1364 aa17.75■□□□□ 0.43
VPS36-207ENST00000611132 VPS37CA5D8V6 355 aaPredicted RBP17.75■□□□□ 0.43
VPS36-207ENST00000611132 PER1O15534 1290 aaPredicted RBP17.75■□□□□ 0.43
VPS36-207ENST00000611132 LETM1O95202 739 aaPredicted RBP17.74■□□□□ 0.43
VPS36-207ENST00000611132 TEX14Q8IWB6 1497 aa17.74■□□□□ 0.43
VPS36-207ENST00000611132 SSFA2P28290 1259 aa17.74■□□□□ 0.43
VPS36-207ENST00000611132 NSD3Q9BZ95 1437 aa17.74■□□□□ 0.43
VPS36-207ENST00000611132 ZKSCAN1P17029 563 aaPredicted RBP17.74■□□□□ 0.43
VPS36-207ENST00000611132 ZNF428Q96B54 188 aa17.74■□□□□ 0.43
VPS36-207ENST00000611132 SEC24BO95487 1268 aa17.73■□□□□ 0.43
VPS36-207ENST00000611132 TMPOP42166 694 aaKnown RBP17.73■□□□□ 0.43
VPS36-207ENST00000611132 IFT57Q9NWB7 429 aa17.73■□□□□ 0.43
VPS36-207ENST00000611132 KIF3AQ9Y496 699 aa17.73■□□□□ 0.43
VPS36-207ENST00000611132 CCDC141Q6ZP82 1450 aa17.73■□□□□ 0.43
VPS36-207ENST00000611132 ERC2O15083 957 aa17.73■□□□□ 0.43
VPS36-207ENST00000611132 RRAGDQ9NQL2 400 aaPredicted RBP17.73■□□□□ 0.43
VPS36-207ENST00000611132 H3BQV1 296 aa17.72■□□□□ 0.43
VPS36-207ENST00000611132 IFFO2Q5TF58 517 aa17.72■□□□□ 0.43
VPS36-207ENST00000611132 GNL2Q13823 731 aaKnown RBP17.72■□□□□ 0.43
VPS36-207ENST00000611132 ARHGEF11O15085 1522 aa17.71■□□□□ 0.43
VPS36-207ENST00000611132 MLECQ14165 292 aa17.71■□□□□ 0.43
VPS36-207ENST00000611132 SPATA31E1Q6ZUB1 1445 aa17.71■□□□□ 0.43
VPS36-207ENST00000611132 TRIM27P14373 513 aa17.71■□□□□ 0.43
VPS36-207ENST00000611132 FKBP5Q13451 457 aaPredicted RBP17.7■□□□□ 0.42
VPS36-207ENST00000611132 AMPHP49418 695 aa17.7■□□□□ 0.42
VPS36-207ENST00000611132 MPNDQ8N594 471 aa17.7■□□□□ 0.42
VPS36-207ENST00000611132 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.7■□□□□ 0.42
VPS36-207ENST00000611132 SYCE3A1L190 88 aa17.7■□□□□ 0.42
VPS36-207ENST00000611132 BICD2Q8TD16 824 aa17.7■□□□□ 0.42
VPS36-207ENST00000611132 FAM184AQ8NB25 1140 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms