RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 MORC1Q86VD1 984 aa13.72□□□□□ -0.21
PABPC1-224ENST00000610907 TMEM131LA2VDJ0 1609 aa13.72□□□□□ -0.21
PABPC1-224ENST00000610907 CGNL1Q0VF96 1302 aa13.72□□□□□ -0.21
PABPC1-224ENST00000610907 NCBP3Q53F19 620 aaKnown RBP13.71□□□□□ -0.21
PABPC1-224ENST00000610907 SLC12A5Q9H2X9 1139 aa13.71□□□□□ -0.21
PABPC1-224ENST00000610907 DIP2BQ9P265 1576 aa13.71□□□□□ -0.21
PABPC1-224ENST00000610907 ANKRD36BQ8N2N9 1353 aa13.71□□□□□ -0.22
PABPC1-224ENST00000610907 TCERG1O14776 1098 aaKnown RBP13.71□□□□□ -0.22
PABPC1-224ENST00000610907 FAM69CQ0P6D2 419 aa13.71□□□□□ -0.22
PABPC1-224ENST00000610907 E9PSI1 815 aa13.7□□□□□ -0.22
PABPC1-224ENST00000610907 APAF1O14727 1248 aa13.69□□□□□ -0.22
PABPC1-224ENST00000610907 TULP4Q9NRJ4 1543 aa13.69□□□□□ -0.22
PABPC1-224ENST00000610907 MS4A1P11836 297 aa13.68□□□□□ -0.22
PABPC1-224ENST00000610907 PHF23Q9BUL5 403 aaPredicted RBP13.68□□□□□ -0.22
PABPC1-224ENST00000610907 NKTRP30414 1462 aaKnown RBP13.67□□□□□ -0.22
PABPC1-224ENST00000610907 MSH5O43196 834 aa13.67□□□□□ -0.22
PABPC1-224ENST00000610907 CFAP53Q96M91 514 aa13.67□□□□□ -0.22
PABPC1-224ENST00000610907 CCDC146Q8IYE0 955 aa13.66□□□□□ -0.22
PABPC1-224ENST00000610907 RUNDC1Q96C34 613 aa13.66□□□□□ -0.22
PABPC1-224ENST00000610907 CRBNQ96SW2 442 aa13.66□□□□□ -0.22
PABPC1-224ENST00000610907 ATAD2Q6PL18 1390 aa13.65□□□□□ -0.22
PABPC1-224ENST00000610907 PLIN1O60240 522 aa13.65□□□□□ -0.22
PABPC1-224ENST00000610907 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
PABPC1-224ENST00000610907 NUTM2DQ5VT03 806 aaPredicted RBP13.64□□□□□ -0.23
PABPC1-224ENST00000610907 YTHDC2Q9H6S0 1430 aaKnown RBP13.64□□□□□ -0.23
PABPC1-224ENST00000610907 PTPRMP28827 1452 aa13.64□□□□□ -0.23
PABPC1-224ENST00000610907 SHPRHQ149N8 1683 aa13.64□□□□□ -0.23
PABPC1-224ENST00000610907 CCDC27Q2M243 656 aa13.63□□□□□ -0.23
PABPC1-224ENST00000610907 CLTCQ00610 1675 aaKnown RBP13.63□□□□□ -0.23
PABPC1-224ENST00000610907 MED14O60244 1454 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 ERICH6Q7L0X2 663 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 ABCC11Q96J66 1382 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 TERF2IPQ9NYB0 399 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 ALKQ9UM73 1620 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 SPATA31D1Q6ZQQ2 1576 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 MTHFSP49914 203 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 WDR63Q8IWG1 891 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 WWC1Q8IX03 1113 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 CABP2Q9NPB3 220 aa13.62□□□□□ -0.23
PABPC1-224ENST00000610907 ANP32AP39687 249 aaKnown RBP13.61□□□□□ -0.23
PABPC1-224ENST00000610907 FBXO31Q5XUX0 539 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-224ENST00000610907 CENPQQ7L2Z9 268 aaPredicted RBP13.61□□□□□ -0.23
PABPC1-224ENST00000610907 STAG3Q9UJ98 1225 aa13.61□□□□□ -0.23
PABPC1-224ENST00000610907 DLC1Q96QB1 1528 aa13.6□□□□□ -0.23
PABPC1-224ENST00000610907 SRPK2P78362 688 aaKnown RBP13.6□□□□□ -0.23
PABPC1-224ENST00000610907 POGKQ9P215 609 aa13.6□□□□□ -0.23
PABPC1-224ENST00000610907 IQSEC2Q5JU85 1478 aa13.6□□□□□ -0.23
PABPC1-224ENST00000610907 PRAM1Q96QH2 718 aa13.59□□□□□ -0.23
PABPC1-224ENST00000610907 SPINK5Q9NQ38 1064 aaPredicted RBP13.59□□□□□ -0.23
PABPC1-224ENST00000610907 STK26Q9P289 416 aa13.59□□□□□ -0.23
PABPC1-224ENST00000610907 A0A1W2PP64 1363 aa13.59□□□□□ -0.23
PABPC1-224ENST00000610907 KDM2BQ8NHM5 1336 aa13.59□□□□□ -0.23
PABPC1-224ENST00000610907 PDE3AQ14432 1141 aa13.58□□□□□ -0.23
PABPC1-224ENST00000610907 C20orf194Q5TEA3 1177 aa13.58□□□□□ -0.23
PABPC1-224ENST00000610907 A2ML1A8K2U0 1454 aa13.58□□□□□ -0.24
PABPC1-224ENST00000610907 KIF13AQ9H1H9 1805 aa13.58□□□□□ -0.24
PABPC1-224ENST00000610907 TNNT2P45379 298 aaPredicted RBP13.58□□□□□ -0.24
PABPC1-224ENST00000610907 AAMPQ13685 434 aa13.58□□□□□ -0.24
PABPC1-224ENST00000610907 TCP11L2Q8N4U5 519 aa13.58□□□□□ -0.24
PABPC1-224ENST00000610907 TSPOAP1O95153 1857 aa13.57□□□□□ -0.24
PABPC1-224ENST00000610907 PDE4AP27815 886 aa13.57□□□□□ -0.24
PABPC1-224ENST00000610907 HDGFL2Q7Z4V5 671 aaPredicted RBP13.57□□□□□ -0.24
PABPC1-224ENST00000610907 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.57□□□□□ -0.24
PABPC1-224ENST00000610907 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
PABPC1-224ENST00000610907 BACH2Q9BYV9 841 aa13.57□□□□□ -0.24
PABPC1-224ENST00000610907 ANKRD26Q9UPS8 1709 aa13.56□□□□□ -0.24
PABPC1-224ENST00000610907 ARHGEF40Q8TER5 1519 aa13.56□□□□□ -0.24
PABPC1-224ENST00000610907 RIMS2Q9UQ26 1411 aa13.56□□□□□ -0.24
PABPC1-224ENST00000610907 HDGFP51858 240 aaKnown RBP13.55□□□□□ -0.24
PABPC1-224ENST00000610907 SAFB2Q14151 953 aaKnown RBP eCLIP13.55□□□□□ -0.24
PABPC1-224ENST00000610907 CD163L1Q9NR16 1453 aa13.55□□□□□ -0.24
PABPC1-224ENST00000610907 MINK1Q8N4C8 1332 aaPredicted RBP13.55□□□□□ -0.24
PABPC1-224ENST00000610907 SIRT1Q96EB6 747 aa13.54□□□□□ -0.24
PABPC1-224ENST00000610907 CDK19Q9BWU1 502 aa13.54□□□□□ -0.24
PABPC1-224ENST00000610907 PNNQ9H307 717 aaKnown RBP13.54□□□□□ -0.24
PABPC1-224ENST00000610907 NOP58Q9Y2X3 529 aaKnown RBP13.54□□□□□ -0.24
PABPC1-224ENST00000610907 FYB1O15117 783 aa13.54□□□□□ -0.24
PABPC1-224ENST00000610907 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
PABPC1-224ENST00000610907 MYH16Q9H6N6 1097 aa13.54□□□□□ -0.24
PABPC1-224ENST00000610907 DMRT2Q9Y5R5 561 aa13.54□□□□□ -0.24
PABPC1-224ENST00000610907 ADGRB2O60241 1585 aa13.53□□□□□ -0.24
PABPC1-224ENST00000610907 BCAR3O75815 825 aa13.53□□□□□ -0.24
PABPC1-224ENST00000610907 U2AF1L5P0DN76 240 aaPredicted RBP13.53□□□□□ -0.24
PABPC1-224ENST00000610907 U2AF1Q01081 240 aaKnown RBP eCLIP13.53□□□□□ -0.24
PABPC1-224ENST00000610907 NLRP1Q9C000 1473 aa13.53□□□□□ -0.24
PABPC1-224ENST00000610907 ATP7BP35670 1465 aa13.52□□□□□ -0.25
PABPC1-224ENST00000610907 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
PABPC1-224ENST00000610907 PNPLA6Q8IY17 1366 aa13.51□□□□□ -0.25
PABPC1-224ENST00000610907 SETD1AO15047 1707 aaKnown RBP13.51□□□□□ -0.25
PABPC1-224ENST00000610907 COL3A1P02461 1466 aaPredicted RBP13.51□□□□□ -0.25
PABPC1-224ENST00000610907 ZMYM3Q14202 1370 aa13.5□□□□□ -0.25
PABPC1-224ENST00000610907 RARSP54136 660 aaKnown RBP13.5□□□□□ -0.25
PABPC1-224ENST00000610907 GGNBP2Q9H3C7 697 aa13.5□□□□□ -0.25
PABPC1-224ENST00000610907 NEUROD2Q15784 382 aa13.49□□□□□ -0.25
PABPC1-224ENST00000610907 CABP1Q9NZU7 370 aa13.49□□□□□ -0.25
PABPC1-224ENST00000610907 ZBTB47Q9UFB7 747 aaPredicted RBP13.49□□□□□ -0.25
PABPC1-224ENST00000610907 IL16Q14005 1332 aa13.49□□□□□ -0.25
PABPC1-224ENST00000610907 FAM135BQ49AJ0 1406 aa13.49□□□□□ -0.25
PABPC1-224ENST00000610907 PLEKHF1Q96S99 279 aa13.49□□□□□ -0.25
PABPC1-224ENST00000610907 RRP7AQ9Y3A4 280 aaKnown RBP13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms