RNA–Protein interactions for RNA: ENST00000609774.1

LMBR1-221, Transcript of limb development membrane protein 1, humanhuman

TSL 3

Gene LMBR1, Length 565 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-221ENST00000609774 RPRD2Q5VT52 1461 aaKnown RBP10.68□□□□□ -0.7
LMBR1-221ENST00000609774 KIF15Q9NS87 1388 aa10.67□□□□□ -0.7
LMBR1-221ENST00000609774 NEFLP07196 543 aa10.67□□□□□ -0.7
LMBR1-221ENST00000609774 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.67□□□□□ -0.7
LMBR1-221ENST00000609774 KANK1Q14678 1352 aa10.66□□□□□ -0.7
LMBR1-221ENST00000609774 CADPS2Q86UW7 1296 aa10.66□□□□□ -0.7
LMBR1-221ENST00000609774 C19orf44Q9H6X5 657 aa10.66□□□□□ -0.7
LMBR1-221ENST00000609774 DCCP43146 1447 aa10.66□□□□□ -0.7
LMBR1-221ENST00000609774 SETD5Q9C0A6 1442 aa10.66□□□□□ -0.7
LMBR1-221ENST00000609774 KANK4Q5T7N3 995 aaPredicted RBP10.65□□□□□ -0.7
LMBR1-221ENST00000609774 DCBLD2Q96PD2 775 aa10.65□□□□□ -0.7
LMBR1-221ENST00000609774 ABCC5O15440 1437 aa10.65□□□□□ -0.7
LMBR1-221ENST00000609774 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
LMBR1-221ENST00000609774 ANP32EQ9BTT0 268 aa10.64□□□□□ -0.71
LMBR1-221ENST00000609774 TMEM131LA2VDJ0 1609 aa10.63□□□□□ -0.71
LMBR1-221ENST00000609774 NHSL1Q5SYE7 1610 aa10.63□□□□□ -0.71
LMBR1-221ENST00000609774 CCER2I3L3R5 266 aa10.63□□□□□ -0.71
LMBR1-221ENST00000609774 RBM33Q96EV2 1170 aaKnown RBP10.63□□□□□ -0.71
LMBR1-221ENST00000609774 ADAMTS13Q76LX8 1427 aa10.63□□□□□ -0.71
LMBR1-221ENST00000609774 RAB3GAP2Q9H2M9 1393 aa10.63□□□□□ -0.71
LMBR1-221ENST00000609774 SRCAPQ6ZRS2 3230 aa10.62□□□□□ -0.71
LMBR1-221ENST00000609774 TRIM52Q96A61 297 aa10.62□□□□□ -0.71
LMBR1-221ENST00000609774 MYO5BQ9ULV0 1848 aa10.62□□□□□ -0.71
LMBR1-221ENST00000609774 RGS12O14924 1447 aa10.61□□□□□ -0.71
LMBR1-221ENST00000609774 RBM6P78332 1123 aaKnown RBP10.61□□□□□ -0.71
LMBR1-221ENST00000609774 MEX3CQ5U5Q3 659 aaKnown RBP10.61□□□□□ -0.71
LMBR1-221ENST00000609774 TSHZ2Q9NRE2 1034 aa10.61□□□□□ -0.71
LMBR1-221ENST00000609774 RIMS2Q9UQ26 1411 aa10.6□□□□□ -0.71
LMBR1-221ENST00000609774 LAMC1P11047 1609 aa10.6□□□□□ -0.71
LMBR1-221ENST00000609774 PTPN23Q9H3S7 1636 aa10.6□□□□□ -0.71
LMBR1-221ENST00000609774 BRINP3Q76B58 766 aa10.6□□□□□ -0.71
LMBR1-221ENST00000609774 DAPK1P53355 1430 aa10.59□□□□□ -0.71
LMBR1-221ENST00000609774 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.59□□□□□ -0.71
LMBR1-221ENST00000609774 ADGRL2O95490 1459 aa10.59□□□□□ -0.71
LMBR1-221ENST00000609774 GCC2Q8IWJ2 1684 aa10.59□□□□□ -0.71
LMBR1-221ENST00000609774 AFF2P51816 1311 aa10.58□□□□□ -0.71
LMBR1-221ENST00000609774 ASXL1Q8IXJ9 1541 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 ANKRD30AQ9BXX3 1397 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 ANP32CO43423 234 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 ATF3P18847 181 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 PROM2Q8N271 834 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 RRP7BPQ9NSQ0 103 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 TRPM2O94759 1503 aa10.58□□□□□ -0.72
LMBR1-221ENST00000609774 POTEB2H3BUK9 544 aa10.57□□□□□ -0.72
LMBR1-221ENST00000609774 CLCN6P51797 869 aa10.57□□□□□ -0.72
LMBR1-221ENST00000609774 LRRC59Q96AG4 307 aaKnown RBP10.57□□□□□ -0.72
LMBR1-221ENST00000609774 XRN1Q8IZH2 1706 aaKnown RBP10.57□□□□□ -0.72
LMBR1-221ENST00000609774 MST1RQ04912 1400 aa10.57□□□□□ -0.72
LMBR1-221ENST00000609774 ATAD2Q6PL18 1390 aa10.56□□□□□ -0.72
LMBR1-221ENST00000609774 CCDC125Q86Z20 511 aa10.56□□□□□ -0.72
LMBR1-221ENST00000609774 ITGAEP38570 1179 aa10.55□□□□□ -0.72
LMBR1-221ENST00000609774 NGLY1Q96IV0 654 aa10.55□□□□□ -0.72
LMBR1-221ENST00000609774 QTRT2Q9H974 415 aaKnown RBP10.55□□□□□ -0.72
LMBR1-221ENST00000609774 PNPLA6Q8IY17 1366 aa10.54□□□□□ -0.72
LMBR1-221ENST00000609774 UNC13BO14795 1591 aa10.54□□□□□ -0.72
LMBR1-221ENST00000609774 PTPRUQ92729 1446 aa10.54□□□□□ -0.72
LMBR1-221ENST00000609774 SETBP1Q9Y6X0 1596 aa10.53□□□□□ -0.72
LMBR1-221ENST00000609774 FNBP4Q8N3X1 1017 aaPredicted RBP10.53□□□□□ -0.72
LMBR1-221ENST00000609774 BCANQ96GW7 911 aa10.53□□□□□ -0.72
LMBR1-221ENST00000609774 NRXN3Q9Y4C0 1643 aa10.53□□□□□ -0.72
LMBR1-221ENST00000609774 PTCH1Q13635 1447 aa10.52□□□□□ -0.73
LMBR1-221ENST00000609774 PPP1R15AO75807 674 aaPredicted RBP10.52□□□□□ -0.73
LMBR1-221ENST00000609774 FKBP8Q14318 412 aa10.52□□□□□ -0.73
LMBR1-221ENST00000609774 AMOTL2Q9Y2J4 779 aa10.52□□□□□ -0.73
LMBR1-221ENST00000609774 IQGAP3Q86VI3 1631 aa10.51□□□□□ -0.73
LMBR1-221ENST00000609774 COL22A1Q8NFW1 1626 aaPredicted RBP10.51□□□□□ -0.73
LMBR1-221ENST00000609774 DDX10Q13206 875 aaKnown RBP10.51□□□□□ -0.73
LMBR1-221ENST00000609774 FAM50AQ14320 339 aaKnown RBP10.51□□□□□ -0.73
LMBR1-221ENST00000609774 C14orf37Q86TY3 774 aa10.51□□□□□ -0.73
LMBR1-221ENST00000609774 ATRNO75882 1429 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 PRAG1Q86YV5 1406 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 ADGRL3Q9HAR2 1447 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 ANKRD50Q9ULJ7 1429 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 NUTM2BA6NNL0 878 aaPredicted RBP10.5□□□□□ -0.73
LMBR1-221ENST00000609774 NUTM2EB1AL46 878 aaPredicted RBP10.5□□□□□ -0.73
LMBR1-221ENST00000609774 PAK3O75914 559 aaPredicted RBP10.5□□□□□ -0.73
LMBR1-221ENST00000609774 ERICH6BQ5W0A0 696 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 NUTM2AQ8IVF1 878 aaPredicted RBP10.5□□□□□ -0.73
LMBR1-221ENST00000609774 MS4A3Q96HJ5 214 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 SOS2Q07890 1332 aaPredicted RBP10.5□□□□□ -0.73
LMBR1-221ENST00000609774 E9PCH4 1651 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 TONSLQ96HA7 1378 aa10.5□□□□□ -0.73
LMBR1-221ENST00000609774 LRP5O75197 1615 aa10.49□□□□□ -0.73
LMBR1-221ENST00000609774 OTUD5Q96G74 571 aa10.49□□□□□ -0.73
LMBR1-221ENST00000609774 C8orf37Q96NL8 207 aa10.49□□□□□ -0.73
LMBR1-221ENST00000609774 TRPC5Q9UL62 973 aaPredicted RBP10.49□□□□□ -0.73
LMBR1-221ENST00000609774 EP400Q96L91 3159 aa10.48□□□□□ -0.73
LMBR1-221ENST00000609774 NUTM2DQ5VT03 806 aaPredicted RBP10.48□□□□□ -0.73
LMBR1-221ENST00000609774 TSPYL2Q9H2G4 693 aaPredicted RBP10.47□□□□□ -0.73
LMBR1-221ENST00000609774 SPHKAPQ2M3C7 1700 aa10.47□□□□□ -0.73
LMBR1-221ENST00000609774 NALCNQ8IZF0 1738 aa10.47□□□□□ -0.73
LMBR1-221ENST00000609774 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.47□□□□□ -0.73
LMBR1-221ENST00000609774 C1orf167Q5SNV9 1468 aa10.46□□□□□ -0.74
LMBR1-221ENST00000609774 MARF1Q9Y4F3 1742 aaKnown RBP10.46□□□□□ -0.74
LMBR1-221ENST00000609774 MYOM2P54296 1465 aa10.45□□□□□ -0.74
LMBR1-221ENST00000609774 BCL9LQ86UU0 1499 aa10.45□□□□□ -0.74
LMBR1-221ENST00000609774 USP21Q9UK80 565 aa10.45□□□□□ -0.74
LMBR1-221ENST00000609774 METP08581 1390 aa10.44□□□□□ -0.74
LMBR1-221ENST00000609774 BLMP54132 1417 aaPredicted RBP10.43□□□□□ -0.74
LMBR1-221ENST00000609774 CHIC2Q9UKJ5 165 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms