RNA–Protein interactions for RNA: ENST00000609684.2

PCDHB16-201, Transcript of protocadherin beta 16, humanhuman

APPRIS P1 BASIC

Gene PCDHB16, Length 5,001 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16-201ENST00000609684 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.46■□□□□ 0.39
PCDHB16-201ENST00000609684 BCAR3O75815 825 aa17.45■□□□□ 0.38
PCDHB16-201ENST00000609684 CLSTN1O94985 981 aa17.45■□□□□ 0.38
PCDHB16-201ENST00000609684 IQGAP2Q13576 1575 aa17.45■□□□□ 0.38
PCDHB16-201ENST00000609684 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.38
PCDHB16-201ENST00000609684 TSR2Q969E8 191 aaKnown RBP17.44■□□□□ 0.38
PCDHB16-201ENST00000609684 TXNDC2Q86VQ3 553 aa17.44■□□□□ 0.38
PCDHB16-201ENST00000609684 RASSF8Q8NHQ8 419 aa17.44■□□□□ 0.38
PCDHB16-201ENST00000609684 RAPGEF4Q8WZA2 1011 aa17.44■□□□□ 0.38
PCDHB16-201ENST00000609684 PDE3AQ14432 1141 aa17.43■□□□□ 0.38
PCDHB16-201ENST00000609684 CABP1Q9NZU7 370 aa17.43■□□□□ 0.38
PCDHB16-201ENST00000609684 RAPGEF3O95398 923 aa17.42■□□□□ 0.38
PCDHB16-201ENST00000609684 ARHGEF11O15085 1522 aa17.42■□□□□ 0.38
PCDHB16-201ENST00000609684 CDK19Q9BWU1 502 aa17.42■□□□□ 0.38
PCDHB16-201ENST00000609684 SLC52A1Q9NWF4 448 aa17.42■□□□□ 0.38
PCDHB16-201ENST00000609684 HSP90AB4PQ58FF6 505 aa17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 NLRP2Q9NX02 1062 aa17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 PDZRN3Q9UPQ7 1066 aa17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 CDC45O75419 566 aa17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 UBTFL1P0CB47 393 aaPredicted RBP17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 ANKRD30BQ9BXX2 1392 aa17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 SMG6Q86US8 1419 aaKnown RBP17.41■□□□□ 0.38
PCDHB16-201ENST00000609684 LRRFIP1Q32MZ4 808 aaKnown RBP17.4■□□□□ 0.38
PCDHB16-201ENST00000609684 TWISTNBQ3B726 338 aaPredicted RBP17.4■□□□□ 0.38
PCDHB16-201ENST00000609684 MCTP1Q6DN14 999 aa17.4■□□□□ 0.38
PCDHB16-201ENST00000609684 CHMP4CQ96CF2 233 aa17.4■□□□□ 0.38
PCDHB16-201ENST00000609684 AIMP1Q12904 312 aaKnown RBP17.4■□□□□ 0.38
PCDHB16-201ENST00000609684 ABTB2Q8N961 1025 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 ABCC5O15440 1437 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 G3V3G9 751 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 DCAF8Q5TAQ9 597 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 PLB1Q6P1J6 1458 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 PTPN23Q9H3S7 1636 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 C11orf95C9JLR9 678 aaPredicted RBP17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 NFKBIBQ15653 356 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 GAS2L2Q8NHY3 880 aa17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 SYTL4Q96C24 671 aaPredicted RBP17.39■□□□□ 0.37
PCDHB16-201ENST00000609684 CAMSAP2Q08AD1 1489 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 CCDC141Q6ZP82 1450 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 CUL7Q14999 1698 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 MAP3K1Q13233 1512 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 ATF3P18847 181 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 RNF20Q5VTR2 975 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 RIC3Q7Z5B4 369 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 CREBRFQ8IUR6 639 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 C1orf115Q9H7X2 142 aa17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 NOB1Q9ULX3 412 aaKnown RBP17.38■□□□□ 0.37
PCDHB16-201ENST00000609684 ERC2O15083 957 aa17.37■□□□□ 0.37
PCDHB16-201ENST00000609684 DNAJC5BQ9UF47 199 aa17.37■□□□□ 0.37
PCDHB16-201ENST00000609684 NUCB2P80303 420 aa17.36■□□□□ 0.37
PCDHB16-201ENST00000609684 SULT6B1Q6IMI4 303 aa17.36■□□□□ 0.37
PCDHB16-201ENST00000609684 LAMC3Q9Y6N6 1575 aa17.36■□□□□ 0.37
PCDHB16-201ENST00000609684 CCDC30Q5VVM6 783 aa17.36■□□□□ 0.37
PCDHB16-201ENST00000609684 WDR63Q8IWG1 891 aa17.36■□□□□ 0.37
PCDHB16-201ENST00000609684 GNAI3P08754 354 aa17.35■□□□□ 0.37
PCDHB16-201ENST00000609684 CPLX2Q6PUV4 134 aaKnown RBP17.35■□□□□ 0.37
PCDHB16-201ENST00000609684 RPGRIP1LQ68CZ1 1315 aa17.35■□□□□ 0.37
PCDHB16-201ENST00000609684 APPP05067 770 aa17.35■□□□□ 0.37
PCDHB16-201ENST00000609684 VPS37CA5D8V6 355 aaPredicted RBP17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 BECN2A8MW95 431 aa17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 GOLGA6L19H0YKK7 550 aa17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 SYNE3Q6ZMZ3 975 aa17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 AKAP17AQ02040 695 aaKnown RBP17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 GPRASP1Q5JY77 1395 aa17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 SMC3Q9UQE7 1217 aa17.34■□□□□ 0.37
PCDHB16-201ENST00000609684 ESCO1Q5FWF5 840 aa17.33■□□□□ 0.37
PCDHB16-201ENST00000609684 CPLX1O14810 134 aa17.33■□□□□ 0.36
PCDHB16-201ENST00000609684 SURF6O75683 361 aaKnown RBP17.33■□□□□ 0.36
PCDHB16-201ENST00000609684 ZNF692Q9BU19 519 aaPredicted RBP17.32■□□□□ 0.36
PCDHB16-201ENST00000609684 AMER1Q5JTC6 1135 aaPredicted RBP17.32■□□□□ 0.36
PCDHB16-201ENST00000609684 RTEL1-TNFRSF6BF6WH68 1400 aa17.32■□□□□ 0.36
PCDHB16-201ENST00000609684 NEUROD6Q96NK8 337 aa17.31■□□□□ 0.36
PCDHB16-201ENST00000609684 ATF7IPQ6VMQ6 1270 aa17.31■□□□□ 0.36
PCDHB16-201ENST00000609684 BACH2Q9BYV9 841 aa17.31■□□□□ 0.36
PCDHB16-201ENST00000609684 GCC1Q96CN9 775 aa17.31■□□□□ 0.36
PCDHB16-201ENST00000609684 NSD3Q9BZ95 1437 aa17.31■□□□□ 0.36
PCDHB16-201ENST00000609684 ATAD2Q6PL18 1390 aa17.31■□□□□ 0.36
PCDHB16-201ENST00000609684 SLC4A2P04920 1241 aa17.3■□□□□ 0.36
PCDHB16-201ENST00000609684 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
PCDHB16-201ENST00000609684 CLASRPQ8N2M8 674 aaKnown RBP17.3■□□□□ 0.36
PCDHB16-201ENST00000609684 TRDNQ13061 729 aa17.3■□□□□ 0.36
PCDHB16-201ENST00000609684 BICD2Q8TD16 824 aa17.3■□□□□ 0.36
PCDHB16-201ENST00000609684 GRIN2AQ12879 1464 aa17.3■□□□□ 0.36
PCDHB16-201ENST00000609684 MARCH6O60337 910 aa17.29■□□□□ 0.36
PCDHB16-201ENST00000609684 MVPQ14764 893 aaKnown RBP17.29■□□□□ 0.36
PCDHB16-201ENST00000609684 NINLQ9Y2I6 1382 aa17.29■□□□□ 0.36
PCDHB16-201ENST00000609684 PLEKHO1Q53GL0 409 aaPredicted RBP17.29■□□□□ 0.36
PCDHB16-201ENST00000609684 NCOA1Q15788 1441 aa17.29■□□□□ 0.36
PCDHB16-201ENST00000609684 SLC26A8Q96RN1 970 aa17.29■□□□□ 0.36
PCDHB16-201ENST00000609684 TRIM29Q14134 588 aa17.28■□□□□ 0.36
PCDHB16-201ENST00000609684 PEG3Q9GZU2 1588 aa17.28■□□□□ 0.36
PCDHB16-201ENST00000609684 WWC1Q8IX03 1113 aa17.28■□□□□ 0.36
PCDHB16-201ENST00000609684 SLFN5Q08AF3 891 aa17.28■□□□□ 0.36
PCDHB16-201ENST00000609684 RRS1Q15050 365 aaKnown RBP17.28■□□□□ 0.36
PCDHB16-201ENST00000609684 THEMISQ8N1K5 641 aaPredicted RBP17.28■□□□□ 0.36
PCDHB16-201ENST00000609684 CNTROBQ8N137 903 aa17.27■□□□□ 0.36
PCDHB16-201ENST00000609684 GNAI2P04899 355 aa17.27■□□□□ 0.36
PCDHB16-201ENST00000609684 HDGFL1Q5TGJ6 251 aa17.27■□□□□ 0.36
PCDHB16-201ENST00000609684 PES1O00541 588 aaKnown RBP17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms