RNA–Protein interactions for RNA: ENST00000606893.5

CDC40-207, Transcript of cell division cycle 40, humanhuman

TSL 2

Gene CDC40, Length 3,372 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC40-207ENST00000606893 HAP1P54257 671 aaPredicted RBP9.23□□□□□ -0.93
CDC40-207ENST00000606893 PANK3Q9H999 370 aa9.23□□□□□ -0.93
CDC40-207ENST00000606893 ZRANB1Q9UGI0 708 aa9.23□□□□□ -0.93
CDC40-207ENST00000606893 SPATA31E1Q6ZUB1 1445 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 PIK3C2BO00750 1634 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 MYO5BQ9ULV0 1848 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 EIF3AQ14152 1382 aaKnown RBP9.22□□□□□ -0.93
CDC40-207ENST00000606893 TET3O43151 1660 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 C3P01024 1663 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 NUTM2BA6NNL0 878 aaPredicted RBP9.22□□□□□ -0.93
CDC40-207ENST00000606893 NUTM2EB1AL46 878 aaPredicted RBP9.22□□□□□ -0.93
CDC40-207ENST00000606893 NUTM2AQ8IVF1 878 aaPredicted RBP9.22□□□□□ -0.93
CDC40-207ENST00000606893 AGLP35573 1532 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 UBAP1LF5GYI3 381 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 CABLES1Q8TDN4 633 aa9.22□□□□□ -0.93
CDC40-207ENST00000606893 PTPRTO14522 1441 aa9.21□□□□□ -0.93
CDC40-207ENST00000606893 GGNBP2Q9H3C7 697 aa9.21□□□□□ -0.93
CDC40-207ENST00000606893 CCDC146Q8IYE0 955 aa9.21□□□□□ -0.94
CDC40-207ENST00000606893 CCER2I3L3R5 266 aa9.21□□□□□ -0.94
CDC40-207ENST00000606893 RGS3P49796 1198 aa9.21□□□□□ -0.94
CDC40-207ENST00000606893 LTV1Q96GA3 475 aaPredicted RBP9.21□□□□□ -0.94
CDC40-207ENST00000606893 PRAG1Q86YV5 1406 aa9.2□□□□□ -0.94
CDC40-207ENST00000606893 A0A0G2JS52 829 aa9.2□□□□□ -0.94
CDC40-207ENST00000606893 PREX1Q8TCU6 1659 aa9.2□□□□□ -0.94
CDC40-207ENST00000606893 EXOC6Q8TAG9 804 aa9.2□□□□□ -0.94
CDC40-207ENST00000606893 SPHKAPQ2M3C7 1700 aa9.2□□□□□ -0.94
CDC40-207ENST00000606893 ROBO2Q9HCK4 1378 aa9.2□□□□□ -0.94
CDC40-207ENST00000606893 DISP3Q9P2K9 1392 aa9.19□□□□□ -0.94
CDC40-207ENST00000606893 PSME1Q06323 249 aa9.19□□□□□ -0.94
CDC40-207ENST00000606893 SETD1BQ9UPS6 1966 aaKnown RBP9.19□□□□□ -0.94
CDC40-207ENST00000606893 USP35Q9P2H5 1018 aa9.19□□□□□ -0.94
CDC40-207ENST00000606893 TRPM2O94759 1503 aa9.18□□□□□ -0.94
CDC40-207ENST00000606893 PPP4R2Q9NY27 417 aa9.18□□□□□ -0.94
CDC40-207ENST00000606893 DAXXQ9UER7 740 aaPredicted RBP9.18□□□□□ -0.94
CDC40-207ENST00000606893 KNSTRNQ9Y448 316 aa9.18□□□□□ -0.94
CDC40-207ENST00000606893 NUDT16Q96DE0 195 aaKnown RBP9.18□□□□□ -0.94
CDC40-207ENST00000606893 MROH2AA6NES4 1674 aa9.18□□□□□ -0.94
CDC40-207ENST00000606893 ARHGAP31Q2M1Z3 1444 aa9.18□□□□□ -0.94
CDC40-207ENST00000606893 EIF2AK4Q9P2K8 1649 aaKnown RBP9.18□□□□□ -0.94
CDC40-207ENST00000606893 TMEM94Q12767 1356 aa9.17□□□□□ -0.94
CDC40-207ENST00000606893 NPHP4O75161 1426 aaPredicted RBP9.17□□□□□ -0.94
CDC40-207ENST00000606893 SCAF11Q99590 1463 aaKnown RBP9.17□□□□□ -0.94
CDC40-207ENST00000606893 TBX22Q9Y458 520 aa9.17□□□□□ -0.94
CDC40-207ENST00000606893 DEPDC5O75140 1603 aa9.17□□□□□ -0.94
CDC40-207ENST00000606893 FANCIQ9NVI1 1328 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 LMTK3Q96Q04 1460 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 ADAMTS2O95450 1211 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 ZC3H6P61129 1189 aaKnown RBP9.16□□□□□ -0.94
CDC40-207ENST00000606893 TESK2Q96S53 571 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 KIF1BO60333 1816 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 EVC2Q86UK5 1308 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 YTHDC2Q9H6S0 1430 aaKnown RBP9.16□□□□□ -0.94
CDC40-207ENST00000606893 VWDEQ8N2E2 1590 aa9.16□□□□□ -0.94
CDC40-207ENST00000606893 CCDC7Q96M83 1385 aa9.15□□□□□ -0.94
CDC40-207ENST00000606893 CEP170BQ9Y4F5 1589 aaPredicted RBP9.15□□□□□ -0.94
CDC40-207ENST00000606893 RTL5Q5HYW3 569 aaPredicted RBP9.15□□□□□ -0.94
CDC40-207ENST00000606893 NME9Q86XW9 330 aa9.15□□□□□ -0.94
CDC40-207ENST00000606893 WASLO00401 505 aaPredicted RBP9.15□□□□□ -0.95
CDC40-207ENST00000606893 SPRYD3Q8NCJ5 442 aa9.15□□□□□ -0.95
CDC40-207ENST00000606893 RRP7AQ9Y3A4 280 aaKnown RBP9.15□□□□□ -0.95
CDC40-207ENST00000606893 LMTK2Q8IWU2 1503 aa9.14□□□□□ -0.95
CDC40-207ENST00000606893 PTPRUQ92729 1446 aa9.14□□□□□ -0.95
CDC40-207ENST00000606893 ADAMTSL3P82987 1691 aa9.14□□□□□ -0.95
CDC40-207ENST00000606893 RRS1Q15050 365 aaKnown RBP9.14□□□□□ -0.95
CDC40-207ENST00000606893 ABTB2Q8N961 1025 aa9.14□□□□□ -0.95
CDC40-207ENST00000606893 ANP32AP39687 249 aaKnown RBP9.13□□□□□ -0.95
CDC40-207ENST00000606893 NLRP6P59044 892 aa9.13□□□□□ -0.95
CDC40-207ENST00000606893 BCL2L13Q9BXK5 485 aa9.13□□□□□ -0.95
CDC40-207ENST00000606893 NLRP1Q9C000 1473 aa9.13□□□□□ -0.95
CDC40-207ENST00000606893 CHRNA2Q15822 529 aa9.13□□□□□ -0.95
CDC40-207ENST00000606893 ZBTB47Q9UFB7 747 aaPredicted RBP9.13□□□□□ -0.95
CDC40-207ENST00000606893 SPATA31D1Q6ZQQ2 1576 aa9.13□□□□□ -0.95
CDC40-207ENST00000606893 RALGAPBQ86X10 1494 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 DMRT2Q9Y5R5 561 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 ACEP12821 1306 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 ADAMTS13Q76LX8 1427 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 SLAIN2Q9P270 581 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 CCDC9Q9Y3X0 531 aaKnown RBP9.12□□□□□ -0.95
CDC40-207ENST00000606893 TMEM131LA2VDJ0 1609 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 PIK3C2GO75747 1445 aa9.12□□□□□ -0.95
CDC40-207ENST00000606893 FRAT1Q92837 279 aaPredicted RBP9.12□□□□□ -0.95
CDC40-207ENST00000606893 C19orf44Q9H6X5 657 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 CCDC61Q9Y6R9 512 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 PLEKHG1Q9ULL1 1385 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 ADGRB3O60242 1522 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 U2SURPO15042 1029 aaKnown RBP9.11□□□□□ -0.95
CDC40-207ENST00000606893 CANXP27824 592 aaKnown RBP9.11□□□□□ -0.95
CDC40-207ENST00000606893 HDGFL2Q7Z4V5 671 aaPredicted RBP9.11□□□□□ -0.95
CDC40-207ENST00000606893 MORC1Q86VD1 984 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 CARD14Q9BXL6 1004 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 PHF8Q9UPP1 1060 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 ZFYVE9O95405 1425 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 NEXMIFQ5QGS0 1516 aa9.11□□□□□ -0.95
CDC40-207ENST00000606893 C20orf194Q5TEA3 1177 aa9.1□□□□□ -0.95
CDC40-207ENST00000606893 MYO3AQ8NEV4 1616 aa9.1□□□□□ -0.95
CDC40-207ENST00000606893 CLUAP1Q96AJ1 413 aa9.1□□□□□ -0.95
CDC40-207ENST00000606893 REREQ9P2R6 1566 aa9.1□□□□□ -0.95
CDC40-207ENST00000606893 ALKQ9UM73 1620 aa9.09□□□□□ -0.95
CDC40-207ENST00000606893 STRN4Q9NRL3 753 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms