RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 ABCA6Q8N139 1617 aa19.42■□□□□ 0.7
LYSMD4-211ENST00000604213 MCM4P33991 863 aa19.42■□□□□ 0.7
LYSMD4-211ENST00000604213 DEPDC5O75140 1603 aa19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 SPAG9O60271 1321 aaKnown RBP19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 BCL2L13Q9BXK5 485 aa19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 MYOM2P54296 1465 aa19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 SHROOM2Q13796 1616 aa19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 MAP3K4Q9Y6R4 1608 aa19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 ADGRF5Q8IZF2 1346 aa19.41■□□□□ 0.7
LYSMD4-211ENST00000604213 GOLGA6L3A6NEY3 463 aa19.4■□□□□ 0.7
LYSMD4-211ENST00000604213 RTEL1-TNFRSF6BF6WH68 1400 aa19.4■□□□□ 0.7
LYSMD4-211ENST00000604213 MORC1Q86VD1 984 aa19.4■□□□□ 0.7
LYSMD4-211ENST00000604213 KANK1Q14678 1352 aa19.39■□□□□ 0.7
LYSMD4-211ENST00000604213 SBNO2Q9Y2G9 1366 aa19.39■□□□□ 0.69
LYSMD4-211ENST00000604213 CCDC27Q2M243 656 aa19.39■□□□□ 0.69
LYSMD4-211ENST00000604213 NSD3Q9BZ95 1437 aa19.38■□□□□ 0.69
LYSMD4-211ENST00000604213 ZFYVE16Q7Z3T8 1539 aa19.38■□□□□ 0.69
LYSMD4-211ENST00000604213 SPRYD3Q8NCJ5 442 aa19.38■□□□□ 0.69
LYSMD4-211ENST00000604213 MVPQ14764 893 aaKnown RBP19.37■□□□□ 0.69
LYSMD4-211ENST00000604213 MYO3AQ8NEV4 1616 aa19.37■□□□□ 0.69
LYSMD4-211ENST00000604213 VWDEQ8N2E2 1590 aa19.37■□□□□ 0.69
LYSMD4-211ENST00000604213 TNNT2P45379 298 aaPredicted RBP19.36■□□□□ 0.69
LYSMD4-211ENST00000604213 AFAP1Q8N556 730 aa19.36■□□□□ 0.69
LYSMD4-211ENST00000604213 CHMP5Q9NZZ3 219 aa19.36■□□□□ 0.69
LYSMD4-211ENST00000604213 C22orf23Q9BZE7 217 aa19.36■□□□□ 0.69
LYSMD4-211ENST00000604213 ARXQ96QS3 562 aa19.35■□□□□ 0.69
LYSMD4-211ENST00000604213 PANK2Q9BZ23 570 aa19.35■□□□□ 0.69
LYSMD4-211ENST00000604213 GZF1Q9H116 711 aaPredicted RBP19.34■□□□□ 0.69
LYSMD4-211ENST00000604213 UGGT1Q9NYU2 1555 aa19.34■□□□□ 0.69
LYSMD4-211ENST00000604213 MYH16Q9H6N6 1097 aa19.34■□□□□ 0.69
LYSMD4-211ENST00000604213 ZNF518AQ6AHZ1 1483 aa19.33■□□□□ 0.69
LYSMD4-211ENST00000604213 TRAK2O60296 914 aa19.33■□□□□ 0.69
LYSMD4-211ENST00000604213 NCBP3Q53F19 620 aaKnown RBP19.33■□□□□ 0.68
LYSMD4-211ENST00000604213 NRXN1Q9ULB1 1477 aa19.32■□□□□ 0.68
LYSMD4-211ENST00000604213 ERCC6L2Q5T890 1561 aa19.32■□□□□ 0.68
LYSMD4-211ENST00000604213 ZKSCAN2Q63HK3 967 aa19.32■□□□□ 0.68
LYSMD4-211ENST00000604213 MTHFSP49914 203 aa19.32■□□□□ 0.68
LYSMD4-211ENST00000604213 MFAP1P55081 439 aaKnown RBP19.32■□□□□ 0.68
LYSMD4-211ENST00000604213 SLC12A5Q9H2X9 1139 aa19.32■□□□□ 0.68
LYSMD4-211ENST00000604213 DZIP1LQ8IYY4 767 aaKnown RBP19.31■□□□□ 0.68
LYSMD4-211ENST00000604213 CLCN1P35523 988 aa19.3■□□□□ 0.68
LYSMD4-211ENST00000604213 IFT172Q9UG01 1749 aa19.3■□□□□ 0.68
LYSMD4-211ENST00000604213 ZNF692Q9BU19 519 aaPredicted RBP19.3■□□□□ 0.68
LYSMD4-211ENST00000604213 HDAC1Q13547 482 aaPredicted RBP19.29■□□□□ 0.68
LYSMD4-211ENST00000604213 FTSJ3Q8IY81 847 aaKnown RBP19.29■□□□□ 0.68
LYSMD4-211ENST00000604213 ZCCHC11Q5TAX3 1644 aaKnown RBP19.29■□□□□ 0.68
LYSMD4-211ENST00000604213 MRE11P49959 708 aa19.28■□□□□ 0.68
LYSMD4-211ENST00000604213 CFAP53Q96M91 514 aa19.28■□□□□ 0.68
LYSMD4-211ENST00000604213 USP32Q8NFA0 1604 aa19.27■□□□□ 0.68
LYSMD4-211ENST00000604213 KIF3BO15066 747 aa19.27■□□□□ 0.68
LYSMD4-211ENST00000604213 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
LYSMD4-211ENST00000604213 CHD1O14646 1710 aa19.27■□□□□ 0.68
LYSMD4-211ENST00000604213 KIF1BO60333 1816 aa19.27■□□□□ 0.68
LYSMD4-211ENST00000604213 CT47B1P0C2W7 299 aaPredicted RBP19.27■□□□□ 0.67
LYSMD4-211ENST00000604213 SETBP1Q9Y6X0 1596 aa19.26■□□□□ 0.67
LYSMD4-211ENST00000604213 DDIT3P35638 169 aa19.26■□□□□ 0.67
LYSMD4-211ENST00000604213 HSCBQ8IWL3 235 aa19.26■□□□□ 0.67
LYSMD4-211ENST00000604213 NCOA3Q9Y6Q9 1424 aa19.26■□□□□ 0.67
LYSMD4-211ENST00000604213 MROH2AA6NES4 1674 aa19.26■□□□□ 0.67
LYSMD4-211ENST00000604213 ARAP3Q8WWN8 1544 aa19.26■□□□□ 0.67
LYSMD4-211ENST00000604213 DDX11L8A8MPP1 907 aa19.25■□□□□ 0.67
LYSMD4-211ENST00000604213 ATP7AQ04656 1500 aa19.25■□□□□ 0.67
LYSMD4-211ENST00000604213 MROH1Q8NDA8 1641 aa19.25■□□□□ 0.67
LYSMD4-211ENST00000604213 ADGRB2O60241 1585 aa19.25■□□□□ 0.67
LYSMD4-211ENST00000604213 ZC3H13Q5T200 1668 aaKnown RBP19.25■□□□□ 0.67
LYSMD4-211ENST00000604213 TRAK1Q9UPV9 953 aa19.25■□□□□ 0.67
LYSMD4-211ENST00000604213 ADGRL1O94910 1474 aa19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 TRIM27P14373 513 aa19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 SMC5Q8IY18 1101 aa19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 TSR2Q969E8 191 aaKnown RBP19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 INO80Q9ULG1 1556 aaPredicted RBP19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 NOS1P29475 1434 aa19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 U2AF1L5P0DN76 240 aaPredicted RBP19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 U2AF1Q01081 240 aaKnown RBP eCLIP19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 NAP1L5Q96NT1 182 aaPredicted RBP19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 SMC4Q9NTJ3 1288 aa19.24■□□□□ 0.67
LYSMD4-211ENST00000604213 GRPEL1Q9HAV7 217 aa19.23■□□□□ 0.67
LYSMD4-211ENST00000604213 DDX19BQ9UMR2 479 aa19.22■□□□□ 0.67
LYSMD4-211ENST00000604213 QRICH2Q9H0J4 1663 aa19.22■□□□□ 0.67
LYSMD4-211ENST00000604213 EXOSC9Q06265 439 aaKnown RBP19.22■□□□□ 0.67
LYSMD4-211ENST00000604213 UHRF1BP1LA0JNW5 1464 aa19.22■□□□□ 0.67
LYSMD4-211ENST00000604213 EFCAB6Q5THR3 1501 aa19.21■□□□□ 0.67
LYSMD4-211ENST00000604213 RBM25P49756 843 aaKnown RBP19.21■□□□□ 0.67
LYSMD4-211ENST00000604213 SSH1Q8WYL5 1049 aa19.21■□□□□ 0.67
LYSMD4-211ENST00000604213 ISY1Q9ULR0 285 aaKnown RBP19.21■□□□□ 0.67
LYSMD4-211ENST00000604213 ITPRIPQ8IWB1 547 aa19.21■□□□□ 0.67
LYSMD4-211ENST00000604213 SNX21Q969T3 373 aa19.21■□□□□ 0.67
LYSMD4-211ENST00000604213 C14orf93Q9H972 538 aaKnown RBP19.2■□□□□ 0.66
LYSMD4-211ENST00000604213 ATF7IPQ6VMQ6 1270 aa19.2■□□□□ 0.66
LYSMD4-211ENST00000604213 ADGRB3O60242 1522 aa19.19■□□□□ 0.66
LYSMD4-211ENST00000604213 ADGRB1O14514 1584 aa19.19■□□□□ 0.66
LYSMD4-211ENST00000604213 ZBTB40Q9NUA8 1239 aa19.18■□□□□ 0.66
LYSMD4-211ENST00000604213 DNAJC5Q9H3Z4 198 aa19.18■□□□□ 0.66
LYSMD4-211ENST00000604213 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
LYSMD4-211ENST00000604213 NSD2O96028 1365 aa19.18■□□□□ 0.66
LYSMD4-211ENST00000604213 CD109Q6YHK3 1445 aa19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 TNPO1Q92973 898 aaKnown RBP19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 PLEKHF1Q96S99 279 aa19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 TRIM35Q9UPQ4 493 aa19.17■□□□□ 0.66
LYSMD4-211ENST00000604213 PPRC1Q5VV67 1664 aaKnown RBP19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms