RNA–Protein interactions for RNA: ENST00000604203.1

TMEM56-RWDD3-201, Transcript of TMEM56-RWDD3 readthrough, humanhuman

TSL 3

Gene TMEM56-RWDD3, Length 680 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-RWDD3-201ENST00000604203 TTC24A2A3L6 582 aaPredicted RBP11.22□□□□□ -0.61
TMEM56-RWDD3-201ENST00000604203 PRKCSHP14314 528 aaPredicted RBP11.22□□□□□ -0.61
TMEM56-RWDD3-201ENST00000604203 AXIN1O15169 862 aa11.21□□□□□ -0.61
TMEM56-RWDD3-201ENST00000604203 MAP2K5Q13163 448 aa11.2□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 CRIPAKQ8N1N5 446 aa11.2□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 DACH1Q9UI36 760 aa11.2□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 AVPP01185 164 aa11.19□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 CD46P15529 392 aa11.19□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 TULP1O00294 542 aaPredicted RBP11.18□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 KDM4AO75164 1064 aa11.18□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 TRIM32Q13049 653 aa11.18□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 MDM2Q00987 491 aaPredicted RBP11.17□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 CTC1Q2NKJ3 1217 aa11.17□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 USB1Q9BQ65 265 aaKnown RBP11.17□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 WNT7AO00755 349 aa11.16□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 KDM2AQ9Y2K7 1162 aa11.16□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 C11orf95C9JLR9 678 aaPredicted RBP11.15□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 MMP16P51512 607 aa11.15□□□□□ -0.62
TMEM56-RWDD3-201ENST00000604203 CCDC180Q9P1Z9 1646 aa11.14□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 TREML4Q6UXN2 200 aa11.14□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 CCDC24Q8N4L8 307 aa11.14□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 HLA-CQ95604 372 aa11.14□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 IRF6O14896 467 aa11.13□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 SNIP1Q8TAD8 396 aaKnown RBP11.13□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 DXOO77932 396 aaKnown RBP11.12□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 USP46P62068 366 aa11.12□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 MRGPRX2Q96LB1 330 aa11.12□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 SMPD1P17405 629 aa11.11□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 SMCPP49901 116 aaPredicted RBP11.11□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 HOXA2O43364 376 aa11.1□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 MINK1Q8N4C8 1332 aaPredicted RBP11.09□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 CCDC102AQ96A19 550 aa11.09□□□□□ -0.63
TMEM56-RWDD3-201ENST00000604203 J3QL48 77 aa11.08□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 GUCA2AQ02747 115 aa11.08□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 REPIN1Q9BWE0 567 aaKnown RBP11.08□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 WFS1O76024 890 aa11.06□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 TPRNQ4KMQ1 711 aa11.06□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 KRI1Q8N9T8 703 aaKnown RBP11.06□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 GPCPD1Q9NPB8 672 aa11.06□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 ATP13A2Q9NQ11 1180 aa11.06□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 CLCN1P35523 988 aa11.05□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 LCE2AQ5TA79 106 aaPredicted RBP11.05□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 RC3H1Q5TC82 1133 aaKnown RBP11.04□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 NUTM1Q86Y26 1132 aa11.04□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 SYMPKQ92797 1274 aaKnown RBP11.04□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 JUNDP17535 347 aa11.03□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 HPS1Q92902 700 aa11.03□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 FAM217BQ9NTX9 383 aaPredicted RBP11.03□□□□□ -0.64
TMEM56-RWDD3-201ENST00000604203 WNT7BP56706 349 aa11.02□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 SKOR1P84550 965 aa11.02□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 SNRPBP14678 240 aaKnown RBP11.01□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 ALDH1A1P00352 501 aa11□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 SENP2Q9HC62 589 aa11□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 NUDT12Q9BQG2 462 aa10.99□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 RETREG3Q86VR2 466 aa10.98□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 TRIM47Q96LD4 638 aa10.98□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 C6orf229H3BNL8 230 aa10.97□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 FDX1P10109 184 aa10.96□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 EHBP1Q8NDI1 1231 aa10.96□□□□□ -0.65
TMEM56-RWDD3-201ENST00000604203 PTCRAQ6ISU1 281 aaPredicted RBP10.94□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 KIFC2Q96AC6 838 aa10.94□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 MS4A1P11836 297 aa10.93□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 TERTO14746 1132 aaKnown RBP10.92□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 PCDHGC3Q9UN70 934 aa10.92□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 WASF2Q9Y6W5 498 aa10.92□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 CCNYL3P0C7X3 344 aa10.91□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 TTLL12Q14166 644 aaPredicted RBP10.91□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 SSTR3P32745 418 aaPredicted RBP10.9□□□□□ -0.66
TMEM56-RWDD3-201ENST00000604203 BMP1P13497 986 aa10.89□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 INSM1Q01101 510 aaPredicted RBP10.89□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 SPIRE2Q8WWL2 714 aa10.89□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 WIPF1O43516 503 aa10.88□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 NDUFV2P19404 249 aa10.88□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 LINC01559Q495D7 138 aa10.88□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.88□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 SIAH2O43255 324 aa10.87□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 SH3BP2P78314 561 aa10.87□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 PTPRNQ16849 979 aa10.87□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 STK17AQ9UEE5 414 aa10.87□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 MOXD2PA6NHM9 499 aa10.86□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 CAPN5O15484 640 aaPredicted RBP10.86□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 UNC93B1Q9H1C4 597 aa10.86□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 LCE2CQ5TA81 110 aa10.85□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 PRR7Q8TB68 274 aa10.85□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 TLL2Q9Y6L7 1015 aa10.84□□□□□ -0.67
TMEM56-RWDD3-201ENST00000604203 MTMR2Q13614 643 aa10.83□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 TRIM46Q7Z4K8 759 aa10.83□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 BAP1Q92560 729 aa10.83□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 EVA1BQ9NVM1 165 aa10.83□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 GIGYF2Q6Y7W6 1299 aaKnown RBP10.82□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 SLC16A10Q8TF71 515 aa10.82□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 KCNH2Q12809 1159 aa10.81□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 BARGINQ6ZT62 677 aa10.8□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 ZNF511Q8NB15 262 aa10.8□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 BEGAINQ9BUH8 593 aa10.8□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 SPDYE5A6NIY4 337 aa10.79□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 AMHR2Q16671 573 aa10.79□□□□□ -0.68
TMEM56-RWDD3-201ENST00000604203 NXF1Q9UBU9 619 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms