RNA–Protein interactions for RNA: ENST00000603717.1

AC008555.3-201, humanhuman

TSL 3 BASIC

Gene AC008555.3, Length 442 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC008555.3-201ENST00000603717 SPDYE16A6NNV3 312 aaPredicted RBP9.74□□□□□ -0.85
AC008555.3-201ENST00000603717 IGHA1P01876 353 aa9.74□□□□□ -0.85
AC008555.3-201ENST00000603717 SLC10A3P09131 477 aa9.74□□□□□ -0.85
AC008555.3-201ENST00000603717 BMP1P13497 986 aa9.74□□□□□ -0.85
AC008555.3-201ENST00000603717 RSF1Q96T23 1441 aaPredicted RBP9.73□□□□□ -0.85
AC008555.3-201ENST00000603717 TMEM134Q9H6X4 195 aa9.73□□□□□ -0.85
AC008555.3-201ENST00000603717 GRXCR2A6NFK2 248 aa9.72□□□□□ -0.85
AC008555.3-201ENST00000603717 DNAJB2P25686 324 aa9.71□□□□□ -0.86
AC008555.3-201ENST00000603717 DNMT3AQ9Y6K1 912 aaPredicted RBP9.71□□□□□ -0.86
AC008555.3-201ENST00000603717 CECR2Q9BXF3 1484 aa9.71□□□□□ -0.86
AC008555.3-201ENST00000603717 SUPT5HO00267 1087 aaKnown RBP9.7□□□□□ -0.86
AC008555.3-201ENST00000603717 PUS10Q3MIT2 529 aaKnown RBP9.7□□□□□ -0.86
AC008555.3-201ENST00000603717 MROH2BQ7Z745 1585 aa9.7□□□□□ -0.86
AC008555.3-201ENST00000603717 RNF225M0QZC1 329 aaPredicted RBP9.69□□□□□ -0.86
AC008555.3-201ENST00000603717 FAM160A2Q8N612 972 aaPredicted RBP9.69□□□□□ -0.86
AC008555.3-201ENST00000603717 THAP11Q96EK4 314 aa9.69□□□□□ -0.86
AC008555.3-201ENST00000603717 SMARCA4P51532 1647 aa9.68□□□□□ -0.86
AC008555.3-201ENST00000603717 BAZ1AQ9NRL2 1556 aaPredicted RBP9.68□□□□□ -0.86
AC008555.3-201ENST00000603717 ADAMTS8Q9UP79 889 aa9.68□□□□□ -0.86
AC008555.3-201ENST00000603717 ADAM23O75077 832 aa9.67□□□□□ -0.86
AC008555.3-201ENST00000603717 WIZO95785 1651 aa9.67□□□□□ -0.86
AC008555.3-201ENST00000603717 TRIM32Q13049 653 aa9.66□□□□□ -0.86
AC008555.3-201ENST00000603717 PRDM9Q9NQV7 894 aa9.66□□□□□ -0.86
AC008555.3-201ENST00000603717 ZBTB24O43167 697 aaPredicted RBP9.64□□□□□ -0.87
AC008555.3-201ENST00000603717 LCE3BQ5TA77 95 aa9.62□□□□□ -0.87
AC008555.3-201ENST00000603717 PEG3Q9GZU2 1588 aa9.61□□□□□ -0.87
AC008555.3-201ENST00000603717 RCCD1A6NED2 376 aa9.59□□□□□ -0.87
AC008555.3-201ENST00000603717 FOXK2Q01167 660 aa9.59□□□□□ -0.87
AC008555.3-201ENST00000603717 REPIN1Q9BWE0 567 aaKnown RBP9.59□□□□□ -0.87
AC008555.3-201ENST00000603717 ZFP42Q96MM3 310 aa9.58□□□□□ -0.88
AC008555.3-201ENST00000603717 EIF4G1Q04637 1599 aaKnown RBP9.58□□□□□ -0.88
AC008555.3-201ENST00000603717 CAPN5O15484 640 aaPredicted RBP9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 IRS1P35568 1242 aa9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 KRT76Q01546 638 aa9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 MORN1Q5T089 497 aa9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 KRTAP4-12Q9BQ66 201 aa9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 ADGRG1Q9Y653 693 aa9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 TOP2AP11388 1531 aaKnown RBP9.56□□□□□ -0.88
AC008555.3-201ENST00000603717 KRTAP9-9Q9BYP9 154 aa9.55□□□□□ -0.88
AC008555.3-201ENST00000603717 KRTAP9-4Q9BYQ2 154 aa9.55□□□□□ -0.88
AC008555.3-201ENST00000603717 ALDH1A1P00352 501 aa9.54□□□□□ -0.88
AC008555.3-201ENST00000603717 SKOR1P84550 965 aa9.54□□□□□ -0.88
AC008555.3-201ENST00000603717 RC3H1Q5TC82 1133 aaKnown RBP9.54□□□□□ -0.88
AC008555.3-201ENST00000603717 RBM46Q8TBY0 533 aaKnown RBP9.54□□□□□ -0.88
AC008555.3-201ENST00000603717 Q8N3U1 123 aa9.53□□□□□ -0.88
AC008555.3-201ENST00000603717 SOBPA7XYQ1 873 aa9.52□□□□□ -0.89
AC008555.3-201ENST00000603717 MSS51Q4VC12 460 aa9.51□□□□□ -0.89
AC008555.3-201ENST00000603717 FMNL1O95466 1100 aaPredicted RBP9.5□□□□□ -0.89
AC008555.3-201ENST00000603717 ARIH1Q9Y4X5 557 aaPredicted RBP9.5□□□□□ -0.89
AC008555.3-201ENST00000603717 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
AC008555.3-201ENST00000603717 BRICD5Q6PL45 260 aa9.49□□□□□ -0.89
AC008555.3-201ENST00000603717 SLC27A5Q9Y2P5 690 aa9.49□□□□□ -0.89
AC008555.3-201ENST00000603717 ZNF385CQ66K41 422 aaPredicted RBP9.48□□□□□ -0.89
AC008555.3-201ENST00000603717 SALL2Q9Y467 1007 aaPredicted RBP9.48□□□□□ -0.89
AC008555.3-201ENST00000603717 KRTAP4-8A0A0G2JLE6 195 aa9.47□□□□□ -0.89
AC008555.3-201ENST00000603717 FAM161AQ3B820 660 aa9.47□□□□□ -0.89
AC008555.3-201ENST00000603717 KANK3Q6NY19 840 aa9.47□□□□□ -0.89
AC008555.3-201ENST00000603717 SIAH2O43255 324 aa9.46□□□□□ -0.9
AC008555.3-201ENST00000603717 WNT7BP56706 349 aa9.45□□□□□ -0.9
AC008555.3-201ENST00000603717 PPFIA3O75145 1194 aa9.44□□□□□ -0.9
AC008555.3-201ENST00000603717 ITGB2P05107 769 aa9.44□□□□□ -0.9
AC008555.3-201ENST00000603717 FECHP22830 423 aa9.44□□□□□ -0.9
AC008555.3-201ENST00000603717 ARHGEF15O94989 841 aa9.43□□□□□ -0.9
AC008555.3-201ENST00000603717 MMP16P51512 607 aa9.43□□□□□ -0.9
AC008555.3-201ENST00000603717 FUT2Q10981 343 aa9.43□□□□□ -0.9
AC008555.3-201ENST00000603717 GPR161Q8N6U8 529 aaKnown RBP9.43□□□□□ -0.9
AC008555.3-201ENST00000603717 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.42□□□□□ -0.9
AC008555.3-201ENST00000603717 MSTNO14793 375 aa9.42□□□□□ -0.9
AC008555.3-201ENST00000603717 RNF19BQ6ZMZ0 732 aa9.42□□□□□ -0.9
AC008555.3-201ENST00000603717 CNTNAP3BQ96NU0 1288 aa9.42□□□□□ -0.9
AC008555.3-201ENST00000603717 SPOCK3Q9BQ16 436 aa9.42□□□□□ -0.9
AC008555.3-201ENST00000603717 CNTNAP3Q9BZ76 1288 aa9.42□□□□□ -0.9
AC008555.3-201ENST00000603717 ATAD2BQ9ULI0 1458 aa9.41□□□□□ -0.9
AC008555.3-201ENST00000603717 PLA2G4EQ3MJ16 856 aa9.4□□□□□ -0.9
AC008555.3-201ENST00000603717 MRPL14Q6P1L8 145 aaKnown RBP9.4□□□□□ -0.9
AC008555.3-201ENST00000603717 HMGXB3Q12766 1538 aa9.4□□□□□ -0.91
AC008555.3-201ENST00000603717 CCDC88BA6NC98 1476 aa9.4□□□□□ -0.91
AC008555.3-201ENST00000603717 ATP6V1AP38606 617 aa9.39□□□□□ -0.91
AC008555.3-201ENST00000603717 PTGDRQ13258 359 aa9.39□□□□□ -0.91
AC008555.3-201ENST00000603717 WHAMMQ8TF30 809 aa9.39□□□□□ -0.91
AC008555.3-201ENST00000603717 PURBQ96QR8 312 aaKnown RBP9.39□□□□□ -0.91
AC008555.3-201ENST00000603717 PROCP04070 461 aa9.38□□□□□ -0.91
AC008555.3-201ENST00000603717 SVOPQ8N4V2 548 aa9.37□□□□□ -0.91
AC008555.3-201ENST00000603717 WASF2Q9Y6W5 498 aa9.36□□□□□ -0.91
AC008555.3-201ENST00000603717 PRDM2Q13029 1718 aa9.35□□□□□ -0.91
AC008555.3-201ENST00000603717 K7ELQ4 463 aaPredicted RBP9.33□□□□□ -0.92
AC008555.3-201ENST00000603717 DXOO77932 396 aaKnown RBP9.33□□□□□ -0.92
AC008555.3-201ENST00000603717 SCARF1Q14162 830 aa9.33□□□□□ -0.92
AC008555.3-201ENST00000603717 RSPH4AQ5TD94 716 aa9.33□□□□□ -0.92
AC008555.3-201ENST00000603717 NCAPD3P42695 1498 aa9.33□□□□□ -0.92
AC008555.3-201ENST00000603717 BAZ1BQ9UIG0 1483 aaKnown RBP9.33□□□□□ -0.92
AC008555.3-201ENST00000603717 E2F4Q16254 413 aa9.32□□□□□ -0.92
AC008555.3-201ENST00000603717 SCARF2Q96GP6 870 aaPredicted RBP9.32□□□□□ -0.92
AC008555.3-201ENST00000603717 SLURP2P0DP57 97 aa9.31□□□□□ -0.92
AC008555.3-201ENST00000603717 RNFT1Q5M7Z0 435 aa9.31□□□□□ -0.92
AC008555.3-201ENST00000603717 PXYLP1Q8TE99 480 aa9.31□□□□□ -0.92
AC008555.3-201ENST00000603717 BTBD11A6QL63 1104 aa9.3□□□□□ -0.92
AC008555.3-201ENST00000603717 MARSP56192 900 aaKnown RBP9.3□□□□□ -0.92
AC008555.3-201ENST00000603717 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
AC008555.3-201ENST00000603717 DCAF5Q96JK2 942 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms