RNA–Protein interactions for RNA: ENST00000603679.1

VCAM1-205, Transcript of vascular cell adhesion molecule 1, humanhuman

Gene VCAM1, Length 3,865 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAM1-205ENST00000603679 SLIT2O94813 1529 aa4.77□□□□□ -1.65
VCAM1-205ENST00000603679 MYT1Q01538 1121 aa4.77□□□□□ -1.65
VCAM1-205ENST00000603679 CHD4Q14839 1912 aa4.77□□□□□ -1.65
VCAM1-205ENST00000603679 NRKQ7Z2Y5 1582 aa4.77□□□□□ -1.65
VCAM1-205ENST00000603679 ARHGEF28Q8N1W1 1705 aaKnown RBP4.77□□□□□ -1.65
VCAM1-205ENST00000603679 FAM9AQ8IZU1 332 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-205ENST00000603679 TSHZ2Q9NRE2 1034 aa4.76□□□□□ -1.65
VCAM1-205ENST00000603679 AKAP12Q02952 1782 aa4.76□□□□□ -1.65
VCAM1-205ENST00000603679 ATF5Q9Y2D1 282 aaPredicted RBP4.76□□□□□ -1.65
VCAM1-205ENST00000603679 RGS12O14924 1447 aa4.76□□□□□ -1.65
VCAM1-205ENST00000603679 NHSQ6T4R5 1651 aa4.75□□□□□ -1.65
VCAM1-205ENST00000603679 LY75O60449 1722 aa4.75□□□□□ -1.65
VCAM1-205ENST00000603679 ABCC5O15440 1437 aa4.75□□□□□ -1.65
VCAM1-205ENST00000603679 DAPK1P53355 1430 aa4.75□□□□□ -1.65
VCAM1-205ENST00000603679 ADGRL3Q9HAR2 1447 aa4.75□□□□□ -1.65
VCAM1-205ENST00000603679 ECM2O94769 699 aaPredicted RBP4.75□□□□□ -1.65
VCAM1-205ENST00000603679 KIAA1551Q9HCM1 1747 aa4.74□□□□□ -1.65
VCAM1-205ENST00000603679 TOM1O60784 492 aa4.74□□□□□ -1.65
VCAM1-205ENST00000603679 SPOCK2Q92563 424 aa4.74□□□□□ -1.65
VCAM1-205ENST00000603679 LAMB1P07942 1786 aa4.74□□□□□ -1.65
VCAM1-205ENST00000603679 ZNF335Q9H4Z2 1342 aaPredicted RBP4.74□□□□□ -1.65
VCAM1-205ENST00000603679 ANKRD26Q9UPS8 1709 aa4.73□□□□□ -1.65
VCAM1-205ENST00000603679 TUBGCP6Q96RT7 1819 aa4.73□□□□□ -1.65
VCAM1-205ENST00000603679 CCDC125Q86Z20 511 aa4.72□□□□□ -1.65
VCAM1-205ENST00000603679 SHANK3Q9BYB0 1731 aa4.72□□□□□ -1.65
VCAM1-205ENST00000603679 KCNA6P17658 529 aa4.72□□□□□ -1.65
VCAM1-205ENST00000603679 THEMISQ8N1K5 641 aaPredicted RBP4.72□□□□□ -1.65
VCAM1-205ENST00000603679 SPAG9O60271 1321 aaKnown RBP4.72□□□□□ -1.65
VCAM1-205ENST00000603679 LRRC37A3O60309 1634 aa4.72□□□□□ -1.65
VCAM1-205ENST00000603679 PARD3Q8TEW0 1356 aa4.71□□□□□ -1.65
VCAM1-205ENST00000603679 PIK3C2AO00443 1686 aa4.71□□□□□ -1.65
VCAM1-205ENST00000603679 AATKQ6ZMQ8 1374 aa4.71□□□□□ -1.66
VCAM1-205ENST00000603679 RGPD8O14715 1765 aaPredicted RBP4.71□□□□□ -1.66
VCAM1-205ENST00000603679 HSPA1LP34931 641 aa4.71□□□□□ -1.66
VCAM1-205ENST00000603679 MAP3K5Q99683 1374 aa4.71□□□□□ -1.66
VCAM1-205ENST00000603679 HFM1A2PYH4 1435 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 MYOM1P52179 1685 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 ZNF219Q9P2Y4 722 aaPredicted RBP4.7□□□□□ -1.66
VCAM1-205ENST00000603679 CCNB3Q8WWL7 1395 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 ONECUT3O60422 494 aaPredicted RBP4.7□□□□□ -1.66
VCAM1-205ENST00000603679 HSPA2P54652 639 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 APLP2Q06481 763 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 MON2Q7Z3U7 1717 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 THSD7BQ9C0I4 1608 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 CCDC144AA2RUR9 1427 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 PNPLA6Q8IY17 1366 aa4.7□□□□□ -1.66
VCAM1-205ENST00000603679 BRCA1P38398 1863 aaKnown RBP4.69□□□□□ -1.66
VCAM1-205ENST00000603679 SIRT1Q96EB6 747 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 SLIT3O75094 1523 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 ANKARQ7Z5J8 1434 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 NCKAP5LQ9HCH0 1330 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 ANKLE2Q86XL3 938 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 TBX22Q9Y458 520 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 PODXL2Q9NZ53 605 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 ADGRB1O14514 1584 aa4.69□□□□□ -1.66
VCAM1-205ENST00000603679 DLEC1Q9Y238 1755 aa4.68□□□□□ -1.66
VCAM1-205ENST00000603679 AFAP1Q8N556 730 aa4.68□□□□□ -1.66
VCAM1-205ENST00000603679 PELP1Q8IZL8 1130 aaKnown RBP4.68□□□□□ -1.66
VCAM1-205ENST00000603679 ARFGEF2Q9Y6D5 1785 aa4.67□□□□□ -1.66
VCAM1-205ENST00000603679 ATP7BP35670 1465 aa4.67□□□□□ -1.66
VCAM1-205ENST00000603679 BRD4O60885 1362 aaPredicted RBP4.67□□□□□ -1.66
VCAM1-205ENST00000603679 PLEKHG2Q9H7P9 1386 aa4.67□□□□□ -1.66
VCAM1-205ENST00000603679 SOS2Q07890 1332 aaPredicted RBP4.67□□□□□ -1.66
VCAM1-205ENST00000603679 UPF1Q92900 1129 aaKnown RBP eCLIP4.67□□□□□ -1.66
VCAM1-205ENST00000603679 FNBP4Q8N3X1 1017 aaPredicted RBP4.66□□□□□ -1.66
VCAM1-205ENST00000603679 SLC52A1Q9NWF4 448 aa4.66□□□□□ -1.66
VCAM1-205ENST00000603679 BLMP54132 1417 aaPredicted RBP4.66□□□□□ -1.66
VCAM1-205ENST00000603679 RIMS2Q9UQ26 1411 aa4.66□□□□□ -1.66
VCAM1-205ENST00000603679 ATAD2Q6PL18 1390 aa4.66□□□□□ -1.66
VCAM1-205ENST00000603679 TAF1LQ8IZX4 1826 aa4.66□□□□□ -1.66
VCAM1-205ENST00000603679 C1orf167Q5SNV9 1468 aa4.66□□□□□ -1.66
VCAM1-205ENST00000603679 ZNF772Q68DY9 489 aaPredicted RBP4.66□□□□□ -1.66
VCAM1-205ENST00000603679 KCNH8Q96L42 1107 aa4.66□□□□□ -1.66
VCAM1-205ENST00000603679 ACIN1Q9UKV3 1341 aaKnown RBP4.65□□□□□ -1.66
VCAM1-205ENST00000603679 SBNO1A3KN83 1393 aa4.65□□□□□ -1.67
VCAM1-205ENST00000603679 TMEM94Q12767 1356 aa4.65□□□□□ -1.67
VCAM1-205ENST00000603679 RGL2O15211 777 aa4.65□□□□□ -1.67
VCAM1-205ENST00000603679 KLHL34Q8N239 644 aa4.65□□□□□ -1.67
VCAM1-205ENST00000603679 ARFGEF1Q9Y6D6 1849 aa4.64□□□□□ -1.67
VCAM1-205ENST00000603679 STAG3Q9UJ98 1225 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 SPATA31E1Q6ZUB1 1445 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 PKD1L3Q7Z443 1732 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 HS6ST3Q8IZP7 471 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 MSH6P52701 1360 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 PIK3C2GO75747 1445 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 C10orf71Q711Q0 1435 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 POTEAQ6S8J7 498 aa4.63□□□□□ -1.67
VCAM1-205ENST00000603679 TULP4Q9NRJ4 1543 aa4.62□□□□□ -1.67
VCAM1-205ENST00000603679 UBAP1LF5GYI3 381 aa4.62□□□□□ -1.67
VCAM1-205ENST00000603679 CEBPAP49715 358 aaPredicted RBP4.62□□□□□ -1.67
VCAM1-205ENST00000603679 CHGAP10645 457 aaKnown RBP4.62□□□□□ -1.67
VCAM1-205ENST00000603679 CFAP65Q6ZU64 1925 aaKnown RBP4.62□□□□□ -1.67
VCAM1-205ENST00000603679 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.61□□□□□ -1.67
VCAM1-205ENST00000603679 TNRC6CQ9HCJ0 1690 aaKnown RBP4.61□□□□□ -1.67
VCAM1-205ENST00000603679 KIF15Q9NS87 1388 aa4.61□□□□□ -1.67
VCAM1-205ENST00000603679 MKRN4PQ13434 485 aaPredicted RBP4.61□□□□□ -1.67
VCAM1-205ENST00000603679 NRXN2Q9P2S2 1712 aa4.61□□□□□ -1.67
VCAM1-205ENST00000603679 ADAMTS7Q9UKP4 1686 aa4.61□□□□□ -1.67
VCAM1-205ENST00000603679 NINLQ9Y2I6 1382 aa4.6□□□□□ -1.67
VCAM1-205ENST00000603679 COL5A3P25940 1745 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms