RNA–Protein interactions for RNA: ENST00000602955.1

AC004542.1-201, humanhuman

TSL 3 BASIC

Gene AC004542.1, Length 264 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004542.1-201ENST00000602955 GRIPAP1Q4V328 841 aa7.28□□□□□ -1.24
AC004542.1-201ENST00000602955 CFAP70Q5T0N1 1121 aa7.28□□□□□ -1.24
AC004542.1-201ENST00000602955 USTQ9Y2C2 406 aa7.28□□□□□ -1.24
AC004542.1-201ENST00000602955 SLC4A3P48751 1232 aa7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 SRPK2P78362 688 aaKnown RBP7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 LRRN4Q8WUT4 740 aa7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 ALG2Q9H553 416 aa7.27□□□□□ -1.25
AC004542.1-201ENST00000602955 HDGFP51858 240 aaKnown RBP7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 VAC14Q08AM6 782 aa7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 SLF2Q8IX21 1173 aa7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 PPP1R12CQ9BZL4 782 aa7.26□□□□□ -1.25
AC004542.1-201ENST00000602955 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 C6orf229H3BNL8 230 aa7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 SOX11P35716 441 aa7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 FUT2Q10981 343 aa7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 FAM98CQ17RN3 349 aaKnown RBP7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 SEPT9Q9UHD8 586 aaPredicted RBP7.25□□□□□ -1.25
AC004542.1-201ENST00000602955 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 ARHGAP33O14559 1287 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 CFHP08603 1231 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 PSEN2P49810 448 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 TSC1Q92574 1164 aa7.24□□□□□ -1.25
AC004542.1-201ENST00000602955 PALM3A6NDB9 673 aaPredicted RBP7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 BRD1O95696 1058 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 CSB-PGBD3P0DP91 1061 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 ATP6V1AP38606 617 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 TMCO4Q5TGY1 634 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 EPS8L1Q8TE68 723 aa7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 GZF1Q9H116 711 aaPredicted RBP7.23□□□□□ -1.25
AC004542.1-201ENST00000602955 RFX1P22670 979 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 KCNA1Q09470 495 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 LAPTM4BQ86VI4 370 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 PRR7Q8TB68 274 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 UCN2Q96RP3 112 aa7.22□□□□□ -1.25
AC004542.1-201ENST00000602955 SAMD7Q7Z3H4 446 aa7.21□□□□□ -1.26
AC004542.1-201ENST00000602955 PBX2P40425 430 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 DESI1Q6ICB0 168 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 POTEEQ6S8J3 1075 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 RETREG3Q86VR2 466 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 PNMA1Q8ND90 353 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 RGS22Q8NE09 1264 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 SYMPKQ92797 1274 aaKnown RBP7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 TFIP11Q9UBB9 837 aaKnown RBP7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 VPS9D1Q9Y2B5 631 aa7.2□□□□□ -1.26
AC004542.1-201ENST00000602955 PER1O15534 1290 aaPredicted RBP7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 LMOD1P29536 600 aaPredicted RBP7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 SEMA3FQ13275 785 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 NR6A1Q15406 480 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 KMT5BQ4FZB7 885 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 MORN1Q5T089 497 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 DMRTA1Q5VZB9 504 aa7.19□□□□□ -1.26
AC004542.1-201ENST00000602955 ATG7O95352 703 aa7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 MFAP1P55081 439 aaKnown RBP7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 Q3C1V9 767 aa7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 MAFBQ9Y5Q3 323 aaPredicted RBP7.18□□□□□ -1.26
AC004542.1-201ENST00000602955 ACTN4O43707 911 aaKnown RBP7.17□□□□□ -1.26
AC004542.1-201ENST00000602955 EIF4G2P78344 907 aaKnown RBP eCLIP7.17□□□□□ -1.26
AC004542.1-201ENST00000602955 NBPF3Q9H094 633 aa7.17□□□□□ -1.26
AC004542.1-201ENST00000602955 NR1H3Q13133 447 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 VARS2Q5ST30 1063 aaKnown RBP7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 LYPD8Q6UX82 237 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 SLC27A5Q9Y2P5 690 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 ERBB3P21860 1342 aa7.16□□□□□ -1.26
AC004542.1-201ENST00000602955 BHMG1C9JSJ3 638 aaPredicted RBP7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 ATP9BO43861 1147 aa7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 ZFRQ96KR1 1074 aaKnown RBP7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 MTMR7Q9Y216 660 aa7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 AXIN2Q9Y2T1 843 aa7.15□□□□□ -1.26
AC004542.1-201ENST00000602955 TMEM88BA6NKF7 163 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 RNF40O75150 1001 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 TBC1D9Q6ZT07 1266 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 NFATC2IPQ8NCF5 419 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 VRTNQ9H8Y1 702 aa7.14□□□□□ -1.27
AC004542.1-201ENST00000602955 PUS10Q3MIT2 529 aaKnown RBP7.13□□□□□ -1.27
AC004542.1-201ENST00000602955 PRR14Q9BWN1 585 aa7.13□□□□□ -1.27
AC004542.1-201ENST00000602955 SALL2Q9Y467 1007 aaPredicted RBP7.13□□□□□ -1.27
AC004542.1-201ENST00000602955 ZC3H4Q9UPT8 1303 aaKnown RBP7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 CARNS1A5YM72 827 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 TK2O00142 265 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 FBXO45P0C2W1 286 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 KANK4Q5T7N3 995 aaPredicted RBP7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 LRCH3Q96II8 777 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 FKBPLQ9UIM3 349 aa7.12□□□□□ -1.27
AC004542.1-201ENST00000602955 ZBBXA8MT70 800 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 ELOAQ14241 798 aaKnown RBP7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 CDCA8Q53HL2 280 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 RNF19BQ6ZMZ0 732 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 ZNF687Q8N1G0 1237 aa7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 USB1Q9BQ65 265 aaKnown RBP7.11□□□□□ -1.27
AC004542.1-201ENST00000602955 F12P00748 615 aaPredicted RBP7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 BLOC1S3Q6QNY0 202 aa7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 MRPL50Q8N5N7 158 aaKnown RBP7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 IVNS1ABPQ9Y6Y0 642 aa7.1□□□□□ -1.27
AC004542.1-201ENST00000602955 B4GALNT3Q6L9W6 998 aa7.09□□□□□ -1.27
AC004542.1-201ENST00000602955 PLEKHM2Q8IWE5 1019 aa7.09□□□□□ -1.27
AC004542.1-201ENST00000602955 OTUD5Q96G74 571 aa7.09□□□□□ -1.27
AC004542.1-201ENST00000602955 PIK3CDO00329 1044 aa7.08□□□□□ -1.28
AC004542.1-201ENST00000602955 PTPRNQ16849 979 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms