RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 TESPA1A2RU30 521 aaPredicted RBP6.65□□□□□ -1.34
SPTBN1-206ENST00000602898 SERPINA10Q9UK55 444 aa6.65□□□□□ -1.34
SPTBN1-206ENST00000602898 ZC3H4Q9UPT8 1303 aaKnown RBP6.65□□□□□ -1.35
SPTBN1-206ENST00000602898 G3V3G9 751 aa6.65□□□□□ -1.35
SPTBN1-206ENST00000602898 CCER1Q8TC90 406 aaPredicted RBP6.65□□□□□ -1.35
SPTBN1-206ENST00000602898 IQSEC2Q5JU85 1478 aa6.65□□□□□ -1.35
SPTBN1-206ENST00000602898 TOP2AP11388 1531 aaKnown RBP6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 KIF3CO14782 793 aa6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 FOXD4Q12950 439 aaPredicted RBP6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 SKIV2LQ15477 1246 aaKnown RBP6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 AK7Q96M32 723 aa6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 ABCC10Q5T3U5 1492 aa6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 FOXK1P85037 733 aa6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 TMEM121BQ9BXQ6 578 aaPredicted RBP6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 TERF2IPQ9NYB0 399 aa6.64□□□□□ -1.35
SPTBN1-206ENST00000602898 CAMK2BQ13554 666 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 CDCA8Q53HL2 280 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 GPATCH3Q96I76 525 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 KIAA0586Q9BVV6 1533 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 FECHP22830 423 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 FNBP4Q8N3X1 1017 aaPredicted RBP6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 IPO4Q8TEX9 1081 aaKnown RBP6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 SYNJ2O15056 1496 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 FAM193AP78312 1265 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 KRI1Q8N9T8 703 aaKnown RBP6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 PLSCR2Q9NRY7 297 aa6.63□□□□□ -1.35
SPTBN1-206ENST00000602898 TRIM66O15016 1216 aa6.62□□□□□ -1.35
SPTBN1-206ENST00000602898 MROH2BQ7Z745 1585 aa6.62□□□□□ -1.35
SPTBN1-206ENST00000602898 C3orf67Q6ZVT6 689 aa6.62□□□□□ -1.35
SPTBN1-206ENST00000602898 NME8Q8N427 588 aa6.62□□□□□ -1.35
SPTBN1-206ENST00000602898 NLRP7Q8WX94 980 aa6.62□□□□□ -1.35
SPTBN1-206ENST00000602898 GAPVD1Q14C86 1478 aa6.62□□□□□ -1.35
SPTBN1-206ENST00000602898 DRC1Q96MC2 740 aa6.61□□□□□ -1.35
SPTBN1-206ENST00000602898 PTMAP06454 111 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-206ENST00000602898 RALBP1Q15311 655 aa6.61□□□□□ -1.35
SPTBN1-206ENST00000602898 FAM161AQ3B820 660 aa6.61□□□□□ -1.35
SPTBN1-206ENST00000602898 FTSJ3Q8IY81 847 aaKnown RBP6.61□□□□□ -1.35
SPTBN1-206ENST00000602898 PAX3P23760 479 aa6.6□□□□□ -1.35
SPTBN1-206ENST00000602898 MAP3K9P80192 1104 aa6.6□□□□□ -1.35
SPTBN1-206ENST00000602898 CDCA7Q9BWT1 371 aaPredicted RBP6.6□□□□□ -1.35
SPTBN1-206ENST00000602898 SREK1Q8WXA9 508 aaKnown RBP6.6□□□□□ -1.35
SPTBN1-206ENST00000602898 PNMA2Q9UL42 364 aa6.6□□□□□ -1.35
SPTBN1-206ENST00000602898 RBM33Q96EV2 1170 aaKnown RBP6.59□□□□□ -1.35
SPTBN1-206ENST00000602898 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.59□□□□□ -1.35
SPTBN1-206ENST00000602898 RRP9O43818 475 aaKnown RBP6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 PPFIA4O75335 1185 aa6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 IER5LQ5T953 404 aa6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 SND1Q7KZF4 910 aaKnown RBP eCLIP6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 GABBR1Q9UBS5 961 aa6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 PPRC1Q5VV67 1664 aaKnown RBP6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 ZNF608Q9ULD9 1512 aaPredicted RBP6.59□□□□□ -1.36
SPTBN1-206ENST00000602898 SLC39A7Q92504 469 aa6.58□□□□□ -1.36
SPTBN1-206ENST00000602898 CDHR5Q9HBB8 845 aa6.58□□□□□ -1.36
SPTBN1-206ENST00000602898 NUTM2FA1L443 756 aa6.58□□□□□ -1.36
SPTBN1-206ENST00000602898 RPS6KL1Q9Y6S9 549 aa6.58□□□□□ -1.36
SPTBN1-206ENST00000602898 ABCA5Q8WWZ7 1642 aa6.58□□□□□ -1.36
SPTBN1-206ENST00000602898 SOCS7O14512 581 aa6.57□□□□□ -1.36
SPTBN1-206ENST00000602898 PARNO95453 639 aaKnown RBP6.57□□□□□ -1.36
SPTBN1-206ENST00000602898 PDIA6Q15084 440 aa6.57□□□□□ -1.36
SPTBN1-206ENST00000602898 TCF3P15923 654 aa6.57□□□□□ -1.36
SPTBN1-206ENST00000602898 TSR1Q2NL82 804 aaKnown RBP6.57□□□□□ -1.36
SPTBN1-206ENST00000602898 TXNDC2Q86VQ3 553 aa6.57□□□□□ -1.36
SPTBN1-206ENST00000602898 C7P10643 843 aa6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 RTL5Q5HYW3 569 aaPredicted RBP6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 GRIN2BQ13224 1484 aa6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 NEFMP07197 916 aa6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 GPIHBP1Q8IV16 184 aa6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 NUP160Q12769 1436 aa6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 KIF4AO95239 1232 aa6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 CANXP27824 592 aaKnown RBP6.56□□□□□ -1.36
SPTBN1-206ENST00000602898 SPATA31D1Q6ZQQ2 1576 aa6.55□□□□□ -1.36
SPTBN1-206ENST00000602898 NUDT7P0C024 238 aa6.55□□□□□ -1.36
SPTBN1-206ENST00000602898 RFX1P22670 979 aa6.55□□□□□ -1.36
SPTBN1-206ENST00000602898 WASHC2CQ9Y4E1 1318 aa6.55□□□□□ -1.36
SPTBN1-206ENST00000602898 PDE6BP35913 854 aa6.55□□□□□ -1.36
SPTBN1-206ENST00000602898 CEP170Q5SW79 1584 aa6.55□□□□□ -1.36
SPTBN1-206ENST00000602898 CCER2I3L3R5 266 aa6.54□□□□□ -1.36
SPTBN1-206ENST00000602898 EVI5O60447 810 aa6.54□□□□□ -1.36
SPTBN1-206ENST00000602898 MAP3K4Q9Y6R4 1608 aa6.54□□□□□ -1.36
SPTBN1-206ENST00000602898 RBM47A0AV96 593 aaKnown RBP6.54□□□□□ -1.36
SPTBN1-206ENST00000602898 PMM1Q92871 262 aa6.54□□□□□ -1.36
SPTBN1-206ENST00000602898 OXER1Q8TDS5 423 aa6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 L3MBTL3Q96JM7 780 aaPredicted RBP6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 ADGRL1O94910 1474 aa6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 LMTK3Q96Q04 1460 aa6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 OSBPP22059 807 aa6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 HSP90AA2PQ14568 343 aaPredicted RBP6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 RBM46Q8TBY0 533 aaKnown RBP6.53□□□□□ -1.36
SPTBN1-206ENST00000602898 WASHC2AQ641Q2 1341 aa6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 CREB3O43889 395 aa6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 ARSIQ5FYB1 569 aa6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 DPH6Q7L8W6 267 aa6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 NOP58Q9Y2X3 529 aaKnown RBP6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 GPR37O15354 613 aa6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 GTF2E1P29083 439 aaPredicted RBP6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 CALD1Q05682 793 aaKnown RBP6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 ZFYVE27Q5T4F4 411 aa6.52□□□□□ -1.37
SPTBN1-206ENST00000602898 ADAMTS12P58397 1594 aa6.51□□□□□ -1.37
SPTBN1-206ENST00000602898 ZNF16P17020 682 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms