RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 CCER2I3L3R5 266 aa30.84■■■□□ 2.53
PPFIA3-212ENST00000602897 TMF1P82094 1093 aa30.81■■■□□ 2.52
PPFIA3-212ENST00000602897 C19orf44Q9H6X5 657 aa30.8■■■□□ 2.52
PPFIA3-212ENST00000602897 SETD1AO15047 1707 aaKnown RBP30.78■■■□□ 2.52
PPFIA3-212ENST00000602897 SLAIN2Q9P270 581 aa30.77■■■□□ 2.52
PPFIA3-212ENST00000602897 FAM135BQ49AJ0 1406 aa30.77■■■□□ 2.52
PPFIA3-212ENST00000602897 ATF3P18847 181 aa30.76■■■□□ 2.51
PPFIA3-212ENST00000602897 CDCA8Q53HL2 280 aa30.76■■■□□ 2.51
PPFIA3-212ENST00000602897 CADPS2Q86UW7 1296 aa30.75■■■□□ 2.51
PPFIA3-212ENST00000602897 ADGRB1O14514 1584 aa30.75■■■□□ 2.51
PPFIA3-212ENST00000602897 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.71■■■□□ 2.51
PPFIA3-212ENST00000602897 PTCH1Q13635 1447 aa30.71■■■□□ 2.51
PPFIA3-212ENST00000602897 ROBO2Q9HCK4 1378 aa30.7■■■□□ 2.51
PPFIA3-212ENST00000602897 SBNO2Q9Y2G9 1366 aa30.7■■■□□ 2.51
PPFIA3-212ENST00000602897 POLR3GLQ9BT43 218 aa30.7■■■□□ 2.51
PPFIA3-212ENST00000602897 DISP3Q9P2K9 1392 aa30.69■■■□□ 2.5
PPFIA3-212ENST00000602897 TMEM132EQ6IEE7 984 aa30.68■■■□□ 2.5
PPFIA3-212ENST00000602897 ROBO1Q9Y6N7 1651 aa30.67■■■□□ 2.5
PPFIA3-212ENST00000602897 DCCP43146 1447 aa30.66■■■□□ 2.5
PPFIA3-212ENST00000602897 ADGRL3Q9HAR2 1447 aa30.66■■■□□ 2.5
PPFIA3-212ENST00000602897 CENPBP07199 599 aaPredicted RBP30.66■■■□□ 2.5
PPFIA3-212ENST00000602897 STK26Q9P289 416 aa30.66■■■□□ 2.5
PPFIA3-212ENST00000602897 PRKRIP1Q9H875 184 aaPredicted RBP30.63■■■□□ 2.49
PPFIA3-212ENST00000602897 LRPPRCP42704 1394 aaKnown RBP30.62■■■□□ 2.49
PPFIA3-212ENST00000602897 ASXL1Q8IXJ9 1541 aa30.62■■■□□ 2.49
PPFIA3-212ENST00000602897 CENPJQ9HC77 1338 aaPredicted RBP30.62■■■□□ 2.49
PPFIA3-212ENST00000602897 ABCC11Q96J66 1382 aa30.59■■■□□ 2.49
PPFIA3-212ENST00000602897 NALCNQ8IZF0 1738 aa30.59■■■□□ 2.49
PPFIA3-212ENST00000602897 TECPR2O15040 1411 aa30.58■■■□□ 2.49
PPFIA3-212ENST00000602897 YTHDC2Q9H6S0 1430 aaKnown RBP30.58■■■□□ 2.49
PPFIA3-212ENST00000602897 KTN1Q86UP2 1357 aaKnown RBP30.57■■■□□ 2.48
PPFIA3-212ENST00000602897 TRAK1Q9UPV9 953 aa30.56■■■□□ 2.48
PPFIA3-212ENST00000602897 MST1RQ04912 1400 aa30.56■■■□□ 2.48
PPFIA3-212ENST00000602897 WAPLQ7Z5K2 1190 aa30.55■■■□□ 2.48
PPFIA3-212ENST00000602897 BRINP3Q76B58 766 aa30.54■■■□□ 2.48
PPFIA3-212ENST00000602897 YTHDC1Q96MU7 727 aaKnown RBP30.54■■■□□ 2.48
PPFIA3-212ENST00000602897 PUS7Q96PZ0 661 aaKnown RBP30.52■■■□□ 2.48
PPFIA3-212ENST00000602897 ARHGEF28Q8N1W1 1705 aaKnown RBP30.5■■■□□ 2.47
PPFIA3-212ENST00000602897 QRICH2Q9H0J4 1663 aa30.5■■■□□ 2.47
PPFIA3-212ENST00000602897 KNDC1Q76NI1 1749 aa30.49■■■□□ 2.47
PPFIA3-212ENST00000602897 PLEKHH1Q9ULM0 1364 aa30.49■■■□□ 2.47
PPFIA3-212ENST00000602897 PHLPP1O60346 1717 aa30.48■■■□□ 2.47
PPFIA3-212ENST00000602897 PER1O15534 1290 aaPredicted RBP30.47■■■□□ 2.47
PPFIA3-212ENST00000602897 SIRT1Q96EB6 747 aa30.47■■■□□ 2.47
PPFIA3-212ENST00000602897 RALBP1Q15311 655 aa30.46■■■□□ 2.47
PPFIA3-212ENST00000602897 MED1Q15648 1581 aaPredicted RBP30.46■■■□□ 2.47
PPFIA3-212ENST00000602897 C1orf167Q5SNV9 1468 aa30.45■■■□□ 2.47
PPFIA3-212ENST00000602897 PANK3Q9H999 370 aa30.45■■■□□ 2.47
PPFIA3-212ENST00000602897 DLC1Q96QB1 1528 aa30.43■■■□□ 2.46
PPFIA3-212ENST00000602897 AHDC1Q5TGY3 1603 aaPredicted RBP30.43■■■□□ 2.46
PPFIA3-212ENST00000602897 PRAM1Q96QH2 718 aa30.42■■■□□ 2.46
PPFIA3-212ENST00000602897 CDC42BPGQ6DT37 1551 aa30.42■■■□□ 2.46
PPFIA3-212ENST00000602897 COL16A1Q07092 1604 aaPredicted RBP30.41■■■□□ 2.46
PPFIA3-212ENST00000602897 EVC2Q86UK5 1308 aa30.4■■■□□ 2.46
PPFIA3-212ENST00000602897 SAFB2Q14151 953 aaKnown RBP eCLIP30.4■■■□□ 2.46
PPFIA3-212ENST00000602897 POGKQ9P215 609 aa30.4■■■□□ 2.46
PPFIA3-212ENST00000602897 JCADQ9P266 1359 aa30.39■■■□□ 2.46
PPFIA3-212ENST00000602897 ORAI2Q96SN7 254 aa30.39■■■□□ 2.46
PPFIA3-212ENST00000602897 MYOM1P52179 1685 aa30.39■■■□□ 2.46
PPFIA3-212ENST00000602897 DDX17Q92841 729 aaKnown RBP30.36■■■□□ 2.45
PPFIA3-212ENST00000602897 NUTM2FA1L443 756 aa30.35■■■□□ 2.45
PPFIA3-212ENST00000602897 PHF23Q9BUL5 403 aaPredicted RBP30.34■■■□□ 2.45
PPFIA3-212ENST00000602897 PARD3Q8TEW0 1356 aa30.34■■■□□ 2.45
PPFIA3-212ENST00000602897 ESCO1Q5FWF5 840 aa30.33■■■□□ 2.45
PPFIA3-212ENST00000602897 KNSTRNQ9Y448 316 aa30.33■■■□□ 2.45
PPFIA3-212ENST00000602897 NPC1L1Q9UHC9 1359 aa30.32■■■□□ 2.44
PPFIA3-212ENST00000602897 MYBBP1AQ9BQG0 1328 aaKnown RBP30.32■■■□□ 2.44
PPFIA3-212ENST00000602897 NHSL1Q5SYE7 1610 aa30.32■■■□□ 2.44
PPFIA3-212ENST00000602897 MRS2Q9HD23 443 aa30.32■■■□□ 2.44
PPFIA3-212ENST00000602897 TULP4Q9NRJ4 1543 aa30.29■■■□□ 2.44
PPFIA3-212ENST00000602897 LRRC59Q96AG4 307 aaKnown RBP30.29■■■□□ 2.44
PPFIA3-212ENST00000602897 ILDR2Q71H61 639 aa30.28■■■□□ 2.44
PPFIA3-212ENST00000602897 NINLQ9Y2I6 1382 aa30.27■■■□□ 2.44
PPFIA3-212ENST00000602897 BRD4O60885 1362 aaPredicted RBP30.27■■■□□ 2.44
PPFIA3-212ENST00000602897 SPATA31A6Q5VVP1 1343 aa30.25■■■□□ 2.43
PPFIA3-212ENST00000602897 FMN2Q9NZ56 1722 aa30.25■■■□□ 2.43
PPFIA3-212ENST00000602897 MINK1Q8N4C8 1332 aaPredicted RBP30.25■■■□□ 2.43
PPFIA3-212ENST00000602897 CCDC184Q52MB2 194 aa30.24■■■□□ 2.43
PPFIA3-212ENST00000602897 AMER1Q5JTC6 1135 aaPredicted RBP30.22■■■□□ 2.43
PPFIA3-212ENST00000602897 SOS2Q07890 1332 aaPredicted RBP30.22■■■□□ 2.43
PPFIA3-212ENST00000602897 NPHP3Q7Z494 1330 aa30.22■■■□□ 2.43
PPFIA3-212ENST00000602897 FOXO3O43524 673 aa30.22■■■□□ 2.43
PPFIA3-212ENST00000602897 NLRP13Q86W25 1043 aa30.22■■■□□ 2.43
PPFIA3-212ENST00000602897 ATAD2Q6PL18 1390 aa30.22■■■□□ 2.43
PPFIA3-212ENST00000602897 SHPRHQ149N8 1683 aa30.21■■■□□ 2.43
PPFIA3-212ENST00000602897 TMC1Q8TDI8 760 aa30.19■■■□□ 2.42
PPFIA3-212ENST00000602897 ADGRB2O60241 1585 aa30.19■■■□□ 2.42
PPFIA3-212ENST00000602897 CC2D1BQ5T0F9 858 aaKnown RBP30.18■■■□□ 2.42
PPFIA3-212ENST00000602897 CNGB1Q14028 1251 aaPredicted RBP30.17■■■□□ 2.42
PPFIA3-212ENST00000602897 PNPLA6Q8IY17 1366 aa30.16■■■□□ 2.42
PPFIA3-212ENST00000602897 NUTM2BA6NNL0 878 aaPredicted RBP30.16■■■□□ 2.42
PPFIA3-212ENST00000602897 NUTM2EB1AL46 878 aaPredicted RBP30.16■■■□□ 2.42
PPFIA3-212ENST00000602897 XPCQ01831 940 aaPredicted RBP30.16■■■□□ 2.42
PPFIA3-212ENST00000602897 NUTM2AQ8IVF1 878 aaPredicted RBP30.16■■■□□ 2.42
PPFIA3-212ENST00000602897 LRP6O75581 1613 aa30.15■■■□□ 2.42
PPFIA3-212ENST00000602897 WASLO00401 505 aaPredicted RBP30.15■■■□□ 2.42
PPFIA3-212ENST00000602897 SRPK2P78362 688 aaKnown RBP30.15■■■□□ 2.42
PPFIA3-212ENST00000602897 SLC12A5Q9H2X9 1139 aa30.15■■■□□ 2.42
PPFIA3-212ENST00000602897 PHF8Q9UPP1 1060 aa30.15■■■□□ 2.42
PPFIA3-212ENST00000602897 MEX3CQ5U5Q3 659 aaKnown RBP30.14■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms