RNA–Protein interactions for RNA: ENST00000602783.1

PPFIA3-209, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 980 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-209ENST00000602783 C8orf37Q96NL8 207 aa31.4■■■□□ 2.62
PPFIA3-209ENST00000602783 RAB3GAP2Q9H2M9 1393 aa31.4■■■□□ 2.62
PPFIA3-209ENST00000602783 LRPPRCP42704 1394 aaKnown RBP31.39■■■□□ 2.62
PPFIA3-209ENST00000602783 ESCO1Q5FWF5 840 aa31.38■■■□□ 2.61
PPFIA3-209ENST00000602783 PIK3C2GO75747 1445 aa31.36■■■□□ 2.61
PPFIA3-209ENST00000602783 ABCC11Q96J66 1382 aa31.36■■■□□ 2.61
PPFIA3-209ENST00000602783 LAMC1P11047 1609 aa31.35■■■□□ 2.61
PPFIA3-209ENST00000602783 TECPR2O15040 1411 aa31.35■■■□□ 2.61
PPFIA3-209ENST00000602783 ADAMTS2O95450 1211 aa31.35■■■□□ 2.61
PPFIA3-209ENST00000602783 NUTM2FA1L443 756 aa31.33■■■□□ 2.61
PPFIA3-209ENST00000602783 CDC42BPGQ6DT37 1551 aa31.32■■■□□ 2.6
PPFIA3-209ENST00000602783 NGLY1Q96IV0 654 aa31.32■■■□□ 2.6
PPFIA3-209ENST00000602783 PLEKHH1Q9ULM0 1364 aa31.31■■■□□ 2.6
PPFIA3-209ENST00000602783 QTRT2Q9H974 415 aaKnown RBP31.31■■■□□ 2.6
PPFIA3-209ENST00000602783 NPHP3Q7Z494 1330 aa31.3■■■□□ 2.6
PPFIA3-209ENST00000602783 C14orf93Q9H972 538 aaKnown RBP31.3■■■□□ 2.6
PPFIA3-209ENST00000602783 YTHDC2Q9H6S0 1430 aaKnown RBP31.3■■■□□ 2.6
PPFIA3-209ENST00000602783 FOXO3O43524 673 aa31.29■■■□□ 2.6
PPFIA3-209ENST00000602783 CFAP70Q5T0N1 1121 aa31.27■■■□□ 2.6
PPFIA3-209ENST00000602783 XPCQ01831 940 aaPredicted RBP31.26■■■□□ 2.59
PPFIA3-209ENST00000602783 UPF1Q92900 1129 aaKnown RBP eCLIP31.25■■■□□ 2.592e-7■■■■□ 24.6
PPFIA3-209ENST00000602783 SIRT1Q96EB6 747 aa31.25■■■□□ 2.59
PPFIA3-209ENST00000602783 KNDC1Q76NI1 1749 aa31.24■■■□□ 2.59
PPFIA3-209ENST00000602783 RBM6P78332 1123 aaKnown RBP31.24■■■□□ 2.59
PPFIA3-209ENST00000602783 CDK12Q9NYV4 1490 aaPredicted RBP31.24■■■□□ 2.59
PPFIA3-209ENST00000602783 NRXN1Q9ULB1 1477 aa31.22■■■□□ 2.59
PPFIA3-209ENST00000602783 DHX57Q6P158 1386 aaKnown RBP31.22■■■□□ 2.59
PPFIA3-209ENST00000602783 MYOM2P54296 1465 aa31.21■■■□□ 2.59
PPFIA3-209ENST00000602783 PXDNQ92626 1479 aa31.21■■■□□ 2.59
PPFIA3-209ENST00000602783 USP21Q9UK80 565 aa31.19■■■□□ 2.58
PPFIA3-209ENST00000602783 SAFB2Q14151 953 aaKnown RBP eCLIP31.16■■■□□ 2.58
PPFIA3-209ENST00000602783 COL22A1Q8NFW1 1626 aaPredicted RBP31.16■■■□□ 2.58
PPFIA3-209ENST00000602783 FNBP4Q8N3X1 1017 aaPredicted RBP31.15■■■□□ 2.58
PPFIA3-209ENST00000602783 PRAM1Q96QH2 718 aa31.15■■■□□ 2.58
PPFIA3-209ENST00000602783 FMN2Q9NZ56 1722 aa31.15■■■□□ 2.58
PPFIA3-209ENST00000602783 RGS12O14924 1447 aa31.14■■■□□ 2.58
PPFIA3-209ENST00000602783 TRPC5Q9UL62 973 aaPredicted RBP31.13■■■□□ 2.57
PPFIA3-209ENST00000602783 KDM2AQ9Y2K7 1162 aa31.12■■■□□ 2.57
PPFIA3-209ENST00000602783 KRT28Q7Z3Y7 464 aa31.11■■■□□ 2.57
PPFIA3-209ENST00000602783 POGKQ9P215 609 aa31.11■■■□□ 2.57
PPFIA3-209ENST00000602783 HRCP23327 699 aa31.09■■■□□ 2.57
PPFIA3-209ENST00000602783 DCAF11Q8TEB1 546 aa31.09■■■□□ 2.57
PPFIA3-209ENST00000602783 PHF8Q9UPP1 1060 aa31.09■■■□□ 2.57
PPFIA3-209ENST00000602783 SPATA31A3Q5VYP0 1347 aa31.08■■■□□ 2.57
PPFIA3-209ENST00000602783 TRAK1Q9UPV9 953 aa31.06■■■□□ 2.56
PPFIA3-209ENST00000602783 KIF1AQ12756 1690 aa31.06■■■□□ 2.56
PPFIA3-209ENST00000602783 RGPD8O14715 1765 aaPredicted RBP31.03■■■□□ 2.56
PPFIA3-209ENST00000602783 PSME1Q06323 249 aa31.03■■■□□ 2.56
PPFIA3-209ENST00000602783 ATRNO75882 1429 aa31.03■■■□□ 2.56
PPFIA3-209ENST00000602783 DLC1Q96QB1 1528 aa31.03■■■□□ 2.56
PPFIA3-209ENST00000602783 BCL9LQ86UU0 1499 aa31.01■■■□□ 2.55
PPFIA3-209ENST00000602783 ADGRB1O14514 1584 aa31■■■□□ 2.55
PPFIA3-209ENST00000602783 STAC3Q96MF2 364 aa31■■■□□ 2.55
PPFIA3-209ENST00000602783 HIRIP3Q9BW71 556 aaPredicted RBP30.99■■■□□ 2.55
PPFIA3-209ENST00000602783 PMFBP1Q8TBY8 1022 aa30.98■■■□□ 2.55
PPFIA3-209ENST00000602783 MARF1Q9Y4F3 1742 aaKnown RBP30.98■■■□□ 2.55
PPFIA3-209ENST00000602783 PLEKHG5O94827 1062 aa30.96■■■□□ 2.55
PPFIA3-209ENST00000602783 HAP1P54257 671 aaPredicted RBP30.96■■■□□ 2.55
PPFIA3-209ENST00000602783 LMOD2Q6P5Q4 547 aa30.96■■■□□ 2.55
PPFIA3-209ENST00000602783 MINK1Q8N4C8 1332 aaPredicted RBP30.96■■■□□ 2.55
PPFIA3-209ENST00000602783 CABLES1Q8TDN4 633 aa30.95■■■□□ 2.55
PPFIA3-209ENST00000602783 GJD4Q96KN9 370 aaPredicted RBP30.95■■■□□ 2.55
PPFIA3-209ENST00000602783 TNS3Q68CZ2 1445 aa30.95■■■□□ 2.54
PPFIA3-209ENST00000602783 ANKARQ7Z5J8 1434 aa30.94■■■□□ 2.54
PPFIA3-209ENST00000602783 UNC5CLQ8IV45 518 aa30.93■■■□□ 2.54
PPFIA3-209ENST00000602783 SBNO1A3KN83 1393 aa30.92■■■□□ 2.54
PPFIA3-209ENST00000602783 ATAD2Q6PL18 1390 aa30.92■■■□□ 2.54
PPFIA3-209ENST00000602783 ADGRB2O60241 1585 aa30.9■■■□□ 2.54
PPFIA3-209ENST00000602783 USP32Q8NFA0 1604 aa30.9■■■□□ 2.54
PPFIA3-209ENST00000602783 SLIT2O94813 1529 aa30.88■■■□□ 2.53
PPFIA3-209ENST00000602783 WASLO00401 505 aaPredicted RBP30.88■■■□□ 2.53
PPFIA3-209ENST00000602783 ARHGEF10O15013 1369 aa30.88■■■□□ 2.53
PPFIA3-209ENST00000602783 PRR36Q9H6K5 1346 aa30.87■■■□□ 2.53
PPFIA3-209ENST00000602783 EIF3AQ14152 1382 aaKnown RBP30.86■■■□□ 2.53
PPFIA3-209ENST00000602783 GPRASP1Q5JY77 1395 aa30.82■■■□□ 2.52
PPFIA3-209ENST00000602783 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.82■■■□□ 2.52
PPFIA3-209ENST00000602783 RALGAPBQ86X10 1494 aa30.82■■■□□ 2.52
PPFIA3-209ENST00000602783 TULP4Q9NRJ4 1543 aa30.81■■■□□ 2.52
PPFIA3-209ENST00000602783 NGDNQ8NEJ9 315 aaKnown RBP30.8■■■□□ 2.52
PPFIA3-209ENST00000602783 FAM83GA6ND36 823 aa30.78■■■□□ 2.52
PPFIA3-209ENST00000602783 ARHGEF28Q8N1W1 1705 aaKnown RBP30.78■■■□□ 2.52
PPFIA3-209ENST00000602783 GLI3P10071 1580 aa30.77■■■□□ 2.52
PPFIA3-209ENST00000602783 VPS72Q15906 364 aa30.77■■■□□ 2.52
PPFIA3-209ENST00000602783 CCDC9Q9Y3X0 531 aaKnown RBP30.76■■■□□ 2.51
PPFIA3-209ENST00000602783 NUDT16Q96DE0 195 aaKnown RBP30.75■■■□□ 2.51
PPFIA3-209ENST00000602783 KIAA1210Q9ULL0 1709 aa30.75■■■□□ 2.51
PPFIA3-209ENST00000602783 TRPM3Q9HCF6 1732 aaPredicted RBP30.74■■■□□ 2.51
PPFIA3-209ENST00000602783 PAK3O75914 559 aaPredicted RBP30.74■■■□□ 2.51
PPFIA3-209ENST00000602783 ABCA3Q99758 1704 aa30.73■■■□□ 2.51
PPFIA3-209ENST00000602783 CCDC125Q86Z20 511 aa30.73■■■□□ 2.51
PPFIA3-209ENST00000602783 CDK19Q9BWU1 502 aa30.73■■■□□ 2.51
PPFIA3-209ENST00000602783 EP400Q96L91 3159 aa30.72■■■□□ 2.51
PPFIA3-209ENST00000602783 SEPT12Q8IYM1 358 aa30.71■■■□□ 2.51
PPFIA3-209ENST00000602783 PLCH1Q4KWH8 1693 aa30.71■■■□□ 2.51
PPFIA3-209ENST00000602783 NBPF1Q3BBV0 1214 aa30.7■■■□□ 2.51
PPFIA3-209ENST00000602783 NWD2Q9ULI1 1742 aa30.69■■■□□ 2.5
PPFIA3-209ENST00000602783 ALS2Q96Q42 1657 aa30.68■■■□□ 2.5
PPFIA3-209ENST00000602783 BTG4Q9NY30 223 aa30.68■■■□□ 2.5
PPFIA3-209ENST00000602783 ATP7BP35670 1465 aa30.68■■■□□ 2.5
PPFIA3-209ENST00000602783 ONECUT3O60422 494 aaPredicted RBP30.67■■■□□ 2.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms