RNA–Protein interactions for RNA: ENST00000602503.1

KDM1A-206, Transcript of lysine demethylase 1A, humanhuman

Gene KDM1A, Length 2,810 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-206ENST00000602503 HMGN5P82970 282 aaKnown RBP9.74□□□□□ -0.85
KDM1A-206ENST00000602503 CIZ1Q9ULV3 898 aaPredicted RBP9.74□□□□□ -0.85
KDM1A-206ENST00000602503 E9PCH4 1651 aa9.74□□□□□ -0.85
KDM1A-206ENST00000602503 CCDC141Q6ZP82 1450 aa9.74□□□□□ -0.85
KDM1A-206ENST00000602503 HNRNPMP52272 730 aaKnown RBP eCLIP9.74□□□□□ -0.85
KDM1A-206ENST00000602503 PRDM10Q9NQV6 1147 aa9.74□□□□□ -0.85
KDM1A-206ENST00000602503 BCORL1Q5H9F3 1711 aa9.73□□□□□ -0.85
KDM1A-206ENST00000602503 RBM25P49756 843 aaKnown RBP9.73□□□□□ -0.85
KDM1A-206ENST00000602503 TBC1D2Q9BYX2 928 aa9.73□□□□□ -0.85
KDM1A-206ENST00000602503 ZNF830Q96NB3 372 aaPredicted RBP9.73□□□□□ -0.85
KDM1A-206ENST00000602503 TBC1D32Q96NH3 1257 aa9.73□□□□□ -0.85
KDM1A-206ENST00000602503 USP47Q96K76 1375 aa9.73□□□□□ -0.85
KDM1A-206ENST00000602503 CDC42BPBQ9Y5S2 1711 aa9.72□□□□□ -0.85
KDM1A-206ENST00000602503 CLASP1Q7Z460 1538 aa9.72□□□□□ -0.85
KDM1A-206ENST00000602503 IRX3P78415 501 aaPredicted RBP9.72□□□□□ -0.85
KDM1A-206ENST00000602503 PRIMPOLQ96LW4 560 aa9.72□□□□□ -0.85
KDM1A-206ENST00000602503 TSPYL1Q9H0U9 437 aa9.72□□□□□ -0.85
KDM1A-206ENST00000602503 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.86
KDM1A-206ENST00000602503 NINLQ9Y2I6 1382 aa9.71□□□□□ -0.86
KDM1A-206ENST00000602503 SAMD9LQ8IVG5 1584 aa9.71□□□□□ -0.86
KDM1A-206ENST00000602503 CCDC66A2RUB6 948 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 NLRP13Q86W25 1043 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 IQGAP3Q86VI3 1631 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 NLRP1Q9C000 1473 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 GOLGA6L22H0YM25 854 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 TSPY4P0CV99 314 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 TSPY10P0CW01 314 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 PKD2Q13563 968 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 NBPF1Q3BBV0 1214 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 MYRIPQ8NFW9 859 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 TRPM1Q7Z4N2 1603 aa9.7□□□□□ -0.86
KDM1A-206ENST00000602503 PLIN1O60240 522 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 ZFP91Q96JP5 570 aaPredicted RBP9.69□□□□□ -0.86
KDM1A-206ENST00000602503 BCCIPQ9P287 314 aaKnown RBP eCLIP9.69□□□□□ -0.86
KDM1A-206ENST00000602503 ZKSCAN5Q9Y2L8 839 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 ATP10AO60312 1499 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 FAM135AQ9P2D6 1515 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 SKAP1Q86WV1 359 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 MYO5CQ9NQX4 1742 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 GTF2F1P35269 517 aaKnown RBP eCLIP9.69□□□□□ -0.86
KDM1A-206ENST00000602503 CCDC39Q9UFE4 941 aa9.69□□□□□ -0.86
KDM1A-206ENST00000602503 NUP155O75694 1391 aa9.68□□□□□ -0.86
KDM1A-206ENST00000602503 MAGI2Q86UL8 1455 aa9.68□□□□□ -0.86
KDM1A-206ENST00000602503 SAMD1Q6SPF0 538 aaPredicted RBP9.68□□□□□ -0.86
KDM1A-206ENST00000602503 FEZ1Q99689 392 aa9.68□□□□□ -0.86
KDM1A-206ENST00000602503 FAM193AP78312 1265 aa9.67□□□□□ -0.86
KDM1A-206ENST00000602503 AMER1Q5JTC6 1135 aaPredicted RBP9.67□□□□□ -0.86
KDM1A-206ENST00000602503 PDLIM2Q96JY6 352 aa9.67□□□□□ -0.86
KDM1A-206ENST00000602503 GPRASP1Q5JY77 1395 aa9.67□□□□□ -0.86
KDM1A-206ENST00000602503 BLMP54132 1417 aaPredicted RBP9.67□□□□□ -0.86
KDM1A-206ENST00000602503 GABPB1Q06547 395 aaPredicted RBP9.67□□□□□ -0.86
KDM1A-206ENST00000602503 GAS2L3Q86XJ1 694 aa9.67□□□□□ -0.86
KDM1A-206ENST00000602503 HSP90AB1P08238 724 aaKnown RBP9.66□□□□□ -0.86
KDM1A-206ENST00000602503 HSCBQ8IWL3 235 aa9.66□□□□□ -0.86
KDM1A-206ENST00000602503 ARAP3Q8WWN8 1544 aa9.66□□□□□ -0.86
KDM1A-206ENST00000602503 DUOX2Q9NRD8 1548 aa9.66□□□□□ -0.86
KDM1A-206ENST00000602503 ABCC2Q92887 1545 aa9.66□□□□□ -0.86
KDM1A-206ENST00000602503 PLCD3Q8N3E9 789 aa9.65□□□□□ -0.86
KDM1A-206ENST00000602503 RGS22Q8NE09 1264 aa9.65□□□□□ -0.86
KDM1A-206ENST00000602503 ERBINQ96RT1 1412 aa9.65□□□□□ -0.86
KDM1A-206ENST00000602503 CGNL1Q0VF96 1302 aa9.65□□□□□ -0.87
KDM1A-206ENST00000602503 CLGNO14967 610 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 ZNF445P59923 1031 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 CBX1P83916 185 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 AXDND1Q5T1B0 1012 aaPredicted RBP9.64□□□□□ -0.87
KDM1A-206ENST00000602503 YY1AP1Q9H869 796 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 PRDM15P57071 1507 aaPredicted RBP9.64□□□□□ -0.87
KDM1A-206ENST00000602503 UHRF1BP1LA0JNW5 1464 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 NCOA3Q9Y6Q9 1424 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 VGLL3A8MV65 326 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 KLHL40Q2TBA0 621 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 CGNQ9P2M7 1197 aaKnown RBP9.64□□□□□ -0.87
KDM1A-206ENST00000602503 KIF3AQ9Y496 699 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 PRAG1Q86YV5 1406 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 NEURL4Q96JN8 1562 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 XPCQ01831 940 aaPredicted RBP9.64□□□□□ -0.87
KDM1A-206ENST00000602503 ZNF771Q7L3S4 317 aaPredicted RBP9.64□□□□□ -0.87
KDM1A-206ENST00000602503 CREBRFQ8IUR6 639 aa9.64□□□□□ -0.87
KDM1A-206ENST00000602503 RNF17Q9BXT8 1623 aaKnown RBP9.63□□□□□ -0.87
KDM1A-206ENST00000602503 CLEC17AQ6ZS10 378 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 CDCA7LQ96GN5 454 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.63□□□□□ -0.87
KDM1A-206ENST00000602503 NPM1P06748 294 aaKnown RBP eCLIP9.63□□□□□ -0.87
KDM1A-206ENST00000602503 DDIT3P35638 169 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 MMP14P50281 582 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 KIAA2012Q0VF49 1180 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 C20orf194Q5TEA3 1177 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 PDCL2Q8N4E4 241 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 SECISBP2LQ93073 1101 aaKnown RBP9.63□□□□□ -0.87
KDM1A-206ENST00000602503 SNX21Q969T3 373 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 TIGD1Q96MW7 591 aa9.63□□□□□ -0.87
KDM1A-206ENST00000602503 ARHGAP31Q2M1Z3 1444 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 SEC24BO95487 1268 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 ATXN8OSP0DMR3 200 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 AFAP1Q8N556 730 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 TTC37Q6PGP7 1564 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 SYCP2Q9BX26 1530 aa9.62□□□□□ -0.87
KDM1A-206ENST00000602503 ZCCHC11Q5TAX3 1644 aaKnown RBP9.62□□□□□ -0.87
KDM1A-206ENST00000602503 RAB3GAP1Q15042 981 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms