RNA–Protein interactions for RNA: ENST00000602133.5

ATP1A3-209, Transcript of ATPase Na+/K+ transporting subunit alpha 3, humanhuman

TSL 2 BASIC

Gene ATP1A3, Length 3,458 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1A3-209ENST00000602133 RTEL1-TNFRSF6BF6WH68 1400 aa13.52□□□□□ -0.24
ATP1A3-209ENST00000602133 CHMP5Q9NZZ3 219 aa13.52□□□□□ -0.25
ATP1A3-209ENST00000602133 PLXNC1O60486 1568 aa13.52□□□□□ -0.25
ATP1A3-209ENST00000602133 TSR2Q969E8 191 aaKnown RBP13.52□□□□□ -0.25
ATP1A3-209ENST00000602133 SLC12A5Q9H2X9 1139 aa13.52□□□□□ -0.25
ATP1A3-209ENST00000602133 SCAPERQ9BY12 1400 aa13.52□□□□□ -0.25
ATP1A3-209ENST00000602133 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
ATP1A3-209ENST00000602133 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 POLR3AO14802 1390 aaPredicted RBP13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 MVPQ14764 893 aaKnown RBP13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 HSP90AA1P07900 732 aaKnown RBP13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 CEP152O94986 1710 aa13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 FTSJ3Q8IY81 847 aaKnown RBP13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 AFAP1Q8N556 730 aa13.51□□□□□ -0.25
ATP1A3-209ENST00000602133 MTHFSP49914 203 aa13.5□□□□□ -0.25
ATP1A3-209ENST00000602133 NGEFQ8N5V2 710 aa13.5□□□□□ -0.25
ATP1A3-209ENST00000602133 ZNF692Q9BU19 519 aaPredicted RBP13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 GRPEL1Q9HAV7 217 aa13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 CLTCL1P53675 1640 aa13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 TRAPPC8Q9Y2L5 1435 aa13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 SPHKAPQ2M3C7 1700 aa13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 PHF23Q9BUL5 403 aaPredicted RBP13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 NSD3Q9BZ95 1437 aa13.49□□□□□ -0.25
ATP1A3-209ENST00000602133 MRE11P49959 708 aa13.48□□□□□ -0.25
ATP1A3-209ENST00000602133 GAS2L3Q86XJ1 694 aa13.48□□□□□ -0.25
ATP1A3-209ENST00000602133 DZIP1LQ8IYY4 767 aaKnown RBP13.48□□□□□ -0.25
ATP1A3-209ENST00000602133 MYH16Q9H6N6 1097 aa13.48□□□□□ -0.25
ATP1A3-209ENST00000602133 FOXD4L1Q9NU39 408 aa13.48□□□□□ -0.25
ATP1A3-209ENST00000602133 WDR63Q8IWG1 891 aa13.48□□□□□ -0.25
ATP1A3-209ENST00000602133 UGGT1Q9NYU2 1555 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 ZKSCAN2Q63HK3 967 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 ITPRIPQ8IWB1 547 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 HSCBQ8IWL3 235 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 TRAK1Q9UPV9 953 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 SHPRHQ149N8 1683 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 TRPM2O94759 1503 aa13.47□□□□□ -0.25
ATP1A3-209ENST00000602133 TRIM27P14373 513 aa13.46□□□□□ -0.25
ATP1A3-209ENST00000602133 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
ATP1A3-209ENST00000602133 U2AF1L5P0DN76 240 aaPredicted RBP13.46□□□□□ -0.26
ATP1A3-209ENST00000602133 U2AF1Q01081 240 aaKnown RBP eCLIP13.46□□□□□ -0.26
ATP1A3-209ENST00000602133 SMC4Q9NTJ3 1288 aa13.46□□□□□ -0.26
ATP1A3-209ENST00000602133 ESPNB1AK53 854 aa13.45□□□□□ -0.26
ATP1A3-209ENST00000602133 AAMPQ13685 434 aa13.45□□□□□ -0.26
ATP1A3-209ENST00000602133 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
ATP1A3-209ENST00000602133 EXOSC9Q06265 439 aaKnown RBP13.45□□□□□ -0.26
ATP1A3-209ENST00000602133 SPAG9O60271 1321 aaKnown RBP13.44□□□□□ -0.26
ATP1A3-209ENST00000602133 ZMYM3Q14202 1370 aa13.44□□□□□ -0.26
ATP1A3-209ENST00000602133 PTPRTO14522 1441 aa13.44□□□□□ -0.26
ATP1A3-209ENST00000602133 EFCAB2Q5VUJ9 269 aa13.44□□□□□ -0.26
ATP1A3-209ENST00000602133 SSH1Q8WYL5 1049 aa13.44□□□□□ -0.26
ATP1A3-209ENST00000602133 LNPKQ9C0E8 428 aa13.43□□□□□ -0.26
ATP1A3-209ENST00000602133 DDX11L8A8MPP1 907 aa13.43□□□□□ -0.26
ATP1A3-209ENST00000602133 CD2BP2O95400 341 aaKnown RBP13.43□□□□□ -0.26
ATP1A3-209ENST00000602133 TMEM132EQ6IEE7 984 aa13.43□□□□□ -0.26
ATP1A3-209ENST00000602133 DDIT3P35638 169 aa13.43□□□□□ -0.26
ATP1A3-209ENST00000602133 KIF3BO15066 747 aa13.42□□□□□ -0.26
ATP1A3-209ENST00000602133 CHGAP10645 457 aaKnown RBP13.42□□□□□ -0.26
ATP1A3-209ENST00000602133 RBM10P98175 930 aaKnown RBP13.42□□□□□ -0.26
ATP1A3-209ENST00000602133 NOB1Q9ULX3 412 aaKnown RBP13.42□□□□□ -0.26
ATP1A3-209ENST00000602133 TMEM57Q8N5G2 664 aa13.42□□□□□ -0.26
ATP1A3-209ENST00000602133 STAC3Q96MF2 364 aa13.41□□□□□ -0.26
ATP1A3-209ENST00000602133 ABCA6Q8N139 1617 aa13.41□□□□□ -0.26
ATP1A3-209ENST00000602133 RRP9O43818 475 aaKnown RBP13.41□□□□□ -0.26
ATP1A3-209ENST00000602133 HDAC1Q13547 482 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-209ENST00000602133 RBM42Q9BTD8 480 aaKnown RBP13.41□□□□□ -0.26
ATP1A3-209ENST00000602133 SENP3Q9H4L4 574 aaPredicted RBP13.41□□□□□ -0.26
ATP1A3-209ENST00000602133 HSP90AB1P08238 724 aaKnown RBP13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 CCDC27Q2M243 656 aa13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 TRIM44Q96DX7 344 aaPredicted RBP13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 PLCH2O75038 1416 aa13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 ZNF518AQ6AHZ1 1483 aa13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 U2SURPO15042 1029 aaKnown RBP13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 ATF7IPQ6VMQ6 1270 aa13.4□□□□□ -0.26
ATP1A3-209ENST00000602133 SMC5Q8IY18 1101 aa13.39□□□□□ -0.27
ATP1A3-209ENST00000602133 CFAP53Q96M91 514 aa13.39□□□□□ -0.27
ATP1A3-209ENST00000602133 KIF2CQ99661 725 aa13.38□□□□□ -0.27
ATP1A3-209ENST00000602133 DDX19BQ9UMR2 479 aa13.38□□□□□ -0.27
ATP1A3-209ENST00000602133 NCOA3Q9Y6Q9 1424 aa13.38□□□□□ -0.27
ATP1A3-209ENST00000602133 RBM25P49756 843 aaKnown RBP13.38□□□□□ -0.27
ATP1A3-209ENST00000602133 MAP3K4Q9Y6R4 1608 aa13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 ZBTB40Q9NUA8 1239 aa13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 ERCC6L2Q5T890 1561 aa13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 KANK1Q14678 1352 aa13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 TRIM35Q9UPQ4 493 aa13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 RAB3GAP1Q15042 981 aa13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 NUTM2DQ5VT03 806 aaPredicted RBP13.37□□□□□ -0.27
ATP1A3-209ENST00000602133 C1orf115Q9H7X2 142 aa13.36□□□□□ -0.27
ATP1A3-209ENST00000602133 ABCC1P33527 1531 aa13.36□□□□□ -0.27
ATP1A3-209ENST00000602133 SSFA2P28290 1259 aa13.36□□□□□ -0.27
ATP1A3-209ENST00000602133 NUCB1Q02818 461 aa13.36□□□□□ -0.27
ATP1A3-209ENST00000602133 SAFB2Q14151 953 aaKnown RBP eCLIP13.36□□□□□ -0.27
ATP1A3-209ENST00000602133 SNX21Q969T3 373 aa13.36□□□□□ -0.27
ATP1A3-209ENST00000602133 NOS1P29475 1434 aa13.35□□□□□ -0.27
ATP1A3-209ENST00000602133 CD109Q6YHK3 1445 aa13.35□□□□□ -0.27
ATP1A3-209ENST00000602133 TMPOP42166 694 aaKnown RBP13.35□□□□□ -0.27
ATP1A3-209ENST00000602133 GBP4Q96PP9 640 aa13.35□□□□□ -0.27
ATP1A3-209ENST00000602133 CHD1LQ86WJ1 897 aa13.35□□□□□ -0.27
ATP1A3-209ENST00000602133 KIAA1210Q9ULL0 1709 aa13.35□□□□□ -0.27
ATP1A3-209ENST00000602133 PDE4CQ08493 712 aa13.34□□□□□ -0.27
ATP1A3-209ENST00000602133 ANKRD45Q5TZF3 282 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms