RNA–Protein interactions for RNA: ENST00000600898.1

USF2-214, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 2

Gene USF2, Length 848 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-214ENST00000600898 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
USF2-214ENST00000600898 RBM33Q96EV2 1170 aaKnown RBP21.49■■□□□ 1.03
USF2-214ENST00000600898 MINK1Q8N4C8 1332 aaPredicted RBP21.49■■□□□ 1.03
USF2-214ENST00000600898 TULP4Q9NRJ4 1543 aa21.49■■□□□ 1.03
USF2-214ENST00000600898 NWD1Q149M9 1564 aa21.48■■□□□ 1.03
USF2-214ENST00000600898 FAM135BQ49AJ0 1406 aa21.47■■□□□ 1.03
USF2-214ENST00000600898 POGKQ9P215 609 aa21.47■■□□□ 1.03
USF2-214ENST00000600898 SIRT1Q96EB6 747 aa21.46■■□□□ 1.03
USF2-214ENST00000600898 SBNO2Q9Y2G9 1366 aa21.45■■□□□ 1.02
USF2-214ENST00000600898 PTCH1Q13635 1447 aa21.45■■□□□ 1.02
USF2-214ENST00000600898 SOCS7O14512 581 aa21.43■■□□□ 1.02
USF2-214ENST00000600898 POLR3GLQ9BT43 218 aa21.43■■□□□ 1.02
USF2-214ENST00000600898 IQSEC2Q5JU85 1478 aa21.42■■□□□ 1.02
USF2-214ENST00000600898 ZNF335Q9H4Z2 1342 aaPredicted RBP21.42■■□□□ 1.02
USF2-214ENST00000600898 DDX10Q13206 875 aaKnown RBP21.41■■□□□ 1.02
USF2-214ENST00000600898 TMF1P82094 1093 aa21.4■■□□□ 1.02
USF2-214ENST00000600898 CABP2Q9NPB3 220 aa21.39■■□□□ 1.01
USF2-214ENST00000600898 NALCNQ8IZF0 1738 aa21.38■■□□□ 1.01
USF2-214ENST00000600898 MYOM1P52179 1685 aa21.37■■□□□ 1.01
USF2-214ENST00000600898 CDK19Q9BWU1 502 aa21.36■■□□□ 1.01
USF2-214ENST00000600898 XIRP1Q702N8 1843 aaKnown RBP21.36■■□□□ 1.01
USF2-214ENST00000600898 ADGRB2O60241 1585 aa21.36■■□□□ 1.01
USF2-214ENST00000600898 UBAP1LF5GYI3 381 aa21.35■■□□□ 1.01
USF2-214ENST00000600898 PROSER2Q86WR7 435 aaPredicted RBP21.35■■□□□ 1.01
USF2-214ENST00000600898 NKTRP30414 1462 aaKnown RBP21.34■■□□□ 1.01
USF2-214ENST00000600898 EVC2Q86UK5 1308 aa21.33■■□□□ 1.01
USF2-214ENST00000600898 PRR36Q9H6K5 1346 aa21.33■■□□□ 1.01
USF2-214ENST00000600898 WASLO00401 505 aaPredicted RBP21.33■■□□□ 1.01
USF2-214ENST00000600898 USP32Q8NFA0 1604 aa21.31■■□□□ 1
USF2-214ENST00000600898 TMEM94Q12767 1356 aa21.31■■□□□ 1
USF2-214ENST00000600898 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
USF2-214ENST00000600898 NUTM2FA1L443 756 aa21.3■■□□□ 1
USF2-214ENST00000600898 ADGRL3Q9HAR2 1447 aa21.29■■□□□ 1
USF2-214ENST00000600898 SRPK2P78362 688 aaKnown RBP21.29■■□□□ 1
USF2-214ENST00000600898 SLC12A5Q9H2X9 1139 aa21.28■■□□□ 1
USF2-214ENST00000600898 RGPD8O14715 1765 aaPredicted RBP21.28■■□□□ 1
USF2-214ENST00000600898 FMN2Q9NZ56 1722 aa21.27■■□□□ 1
USF2-214ENST00000600898 ATP7BP35670 1465 aa21.26■□□□□ 0.99
USF2-214ENST00000600898 DIEXFQ68CQ4 756 aaKnown RBP21.25■□□□□ 0.99
USF2-214ENST00000600898 NUDT16Q96DE0 195 aaKnown RBP21.25■□□□□ 0.99
USF2-214ENST00000600898 CDC42BPGQ6DT37 1551 aa21.24■□□□□ 0.99
USF2-214ENST00000600898 CDCA8Q53HL2 280 aa21.24■□□□□ 0.99
USF2-214ENST00000600898 PUS7Q96PZ0 661 aaKnown RBP21.24■□□□□ 0.99
USF2-214ENST00000600898 PANK3Q9H999 370 aa21.24■□□□□ 0.99
USF2-214ENST00000600898 CD163L1Q9NR16 1453 aa21.23■□□□□ 0.99
USF2-214ENST00000600898 TOPAZ1Q8N9V7 1692 aa21.23■□□□□ 0.99
USF2-214ENST00000600898 SLC24A1O60721 1099 aa21.22■□□□□ 0.99
USF2-214ENST00000600898 C14orf37Q86TY3 774 aa21.22■□□□□ 0.99
USF2-214ENST00000600898 TMC1Q8TDI8 760 aa21.22■□□□□ 0.99
USF2-214ENST00000600898 CARD14Q9BXL6 1004 aa21.22■□□□□ 0.99
USF2-214ENST00000600898 CABP1Q9NZU7 370 aa21.21■□□□□ 0.99
USF2-214ENST00000600898 SCAF1Q9H7N4 1312 aaKnown RBP21.21■□□□□ 0.99
USF2-214ENST00000600898 ATAD2Q6PL18 1390 aa21.2■□□□□ 0.98
USF2-214ENST00000600898 PER1O15534 1290 aaPredicted RBP21.19■□□□□ 0.98
USF2-214ENST00000600898 PPIP5K1Q6PFW1 1433 aa21.19■□□□□ 0.98
USF2-214ENST00000600898 PIP4K2BP78356 416 aa21.18■□□□□ 0.98
USF2-214ENST00000600898 C19orf44Q9H6X5 657 aa21.18■□□□□ 0.98
USF2-214ENST00000600898 NCOA3Q9Y6Q9 1424 aa21.17■□□□□ 0.98
USF2-214ENST00000600898 A0A1W2PP64 1363 aa21.15■□□□□ 0.98
USF2-214ENST00000600898 CCDC61Q9Y6R9 512 aa21.15■□□□□ 0.98
USF2-214ENST00000600898 MST1RQ04912 1400 aa21.14■□□□□ 0.98
USF2-214ENST00000600898 ANKARQ7Z5J8 1434 aa21.14■□□□□ 0.98
USF2-214ENST00000600898 HSPA1LP34931 641 aa21.14■□□□□ 0.97
USF2-214ENST00000600898 PMFBP1Q8TBY8 1022 aa21.14■□□□□ 0.97
USF2-214ENST00000600898 TOM1O60784 492 aa21.13■□□□□ 0.97
USF2-214ENST00000600898 CNGB1Q14028 1251 aaPredicted RBP21.13■□□□□ 0.97
USF2-214ENST00000600898 ORAI2Q96SN7 254 aa21.13■□□□□ 0.97
USF2-214ENST00000600898 AKAP12Q02952 1782 aa21.13■□□□□ 0.97
USF2-214ENST00000600898 CPSF1Q10570 1443 aaKnown RBP21.12■□□□□ 0.97
USF2-214ENST00000600898 ANKRD36BQ8N2N9 1353 aa21.12■□□□□ 0.97
USF2-214ENST00000600898 PLEKHG3A1L390 1219 aa21.12■□□□□ 0.97
USF2-214ENST00000600898 C1orf167Q5SNV9 1468 aa21.12■□□□□ 0.97
USF2-214ENST00000600898 MIER1Q8N108 512 aa21.11■□□□□ 0.97
USF2-214ENST00000600898 ITSN1Q15811 1721 aa21.11■□□□□ 0.97
USF2-214ENST00000600898 MSH6P52701 1360 aa21.1■□□□□ 0.97
USF2-214ENST00000600898 ACEP12821 1306 aa21.1■□□□□ 0.97
USF2-214ENST00000600898 DCCP43146 1447 aa21.1■□□□□ 0.97
USF2-214ENST00000600898 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
USF2-214ENST00000600898 NINLQ9Y2I6 1382 aa21.09■□□□□ 0.97
USF2-214ENST00000600898 ATF3P18847 181 aa21.08■□□□□ 0.97
USF2-214ENST00000600898 AMER1Q5JTC6 1135 aaPredicted RBP21.08■□□□□ 0.97
USF2-214ENST00000600898 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.97
USF2-214ENST00000600898 ESCO1Q5FWF5 840 aa21.06■□□□□ 0.96
USF2-214ENST00000600898 PHF8Q9UPP1 1060 aa21.06■□□□□ 0.96
USF2-214ENST00000600898 POLR3AO14802 1390 aaPredicted RBP21.06■□□□□ 0.96
USF2-214ENST00000600898 CC2D1BQ5T0F9 858 aaKnown RBP21.05■□□□□ 0.96
USF2-214ENST00000600898 DDX17Q92841 729 aaKnown RBP21.05■□□□□ 0.96
USF2-214ENST00000600898 NRKQ7Z2Y5 1582 aa21.05■□□□□ 0.96
USF2-214ENST00000600898 CADPS2Q86UW7 1296 aa21.04■□□□□ 0.96
USF2-214ENST00000600898 TERF2IPQ9NYB0 399 aa21.04■□□□□ 0.96
USF2-214ENST00000600898 ZRANB1Q9UGI0 708 aa21.04■□□□□ 0.96
USF2-214ENST00000600898 KTN1Q86UP2 1357 aaKnown RBP21.04■□□□□ 0.96
USF2-214ENST00000600898 MED1Q15648 1581 aaPredicted RBP21.04■□□□□ 0.96
USF2-214ENST00000600898 SSH2Q76I76 1423 aa21.04■□□□□ 0.96
USF2-214ENST00000600898 HDGFL2Q7Z4V5 671 aaPredicted RBP21.03■□□□□ 0.96
USF2-214ENST00000600898 KNSTRNQ9Y448 316 aa21.02■□□□□ 0.96
USF2-214ENST00000600898 USP6P35125 1406 aa21.02■□□□□ 0.96
USF2-214ENST00000600898 XPCQ01831 940 aaPredicted RBP21.01■□□□□ 0.95
USF2-214ENST00000600898 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
USF2-214ENST00000600898 NGDNQ8NEJ9 315 aaKnown RBP21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms