RNA–Protein interactions for RNA: ENST00000600380.1

FARP1-230, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, humanhuman

TSL 3

Gene FARP1, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FARP1-230ENST00000600380 UBAP1LF5GYI3 381 aa16.85■□□□□ 0.29
FARP1-230ENST00000600380 MINK1Q8N4C8 1332 aaPredicted RBP16.85■□□□□ 0.29
FARP1-230ENST00000600380 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
FARP1-230ENST00000600380 MSH6P52701 1360 aa16.84■□□□□ 0.29
FARP1-230ENST00000600380 CENPJQ9HC77 1338 aaPredicted RBP16.81■□□□□ 0.28
FARP1-230ENST00000600380 ATF3P18847 181 aa16.8■□□□□ 0.28
FARP1-230ENST00000600380 SLAIN2Q9P270 581 aa16.8■□□□□ 0.28
FARP1-230ENST00000600380 NUTM2FA1L443 756 aa16.79■□□□□ 0.28
FARP1-230ENST00000600380 PIP4K2BP78356 416 aa16.79■□□□□ 0.28
FARP1-230ENST00000600380 MST1RQ04912 1400 aa16.79■□□□□ 0.28
FARP1-230ENST00000600380 ST20-MTHFSA0A0A6YYL1 179 aa16.78■□□□□ 0.28
FARP1-230ENST00000600380 TOM1O60784 492 aa16.78■□□□□ 0.28
FARP1-230ENST00000600380 CADPS2Q86UW7 1296 aa16.78■□□□□ 0.28
FARP1-230ENST00000600380 DCCP43146 1447 aa16.78■□□□□ 0.28
FARP1-230ENST00000600380 USP47Q96K76 1375 aa16.77■□□□□ 0.28
FARP1-230ENST00000600380 FBXO41Q8TF61 875 aa16.77■□□□□ 0.28
FARP1-230ENST00000600380 TESK2Q96S53 571 aa16.77■□□□□ 0.28
FARP1-230ENST00000600380 CDC42BPGQ6DT37 1551 aa16.77■□□□□ 0.27
FARP1-230ENST00000600380 WASLO00401 505 aaPredicted RBP16.76■□□□□ 0.27
FARP1-230ENST00000600380 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
FARP1-230ENST00000600380 C1orf167Q5SNV9 1468 aa16.75■□□□□ 0.27
FARP1-230ENST00000600380 ORAI2Q96SN7 254 aa16.75■□□□□ 0.27
FARP1-230ENST00000600380 CDK19Q9BWU1 502 aa16.75■□□□□ 0.27
FARP1-230ENST00000600380 ADGRB2O60241 1585 aa16.75■□□□□ 0.27
FARP1-230ENST00000600380 QRICH2Q9H0J4 1663 aa16.75■□□□□ 0.27
FARP1-230ENST00000600380 SCAF1Q9H7N4 1312 aaKnown RBP16.73■□□□□ 0.27
FARP1-230ENST00000600380 HSPA5P11021 654 aaKnown RBP16.73■□□□□ 0.27
FARP1-230ENST00000600380 BRINP3Q76B58 766 aa16.73■□□□□ 0.27
FARP1-230ENST00000600380 TULP4Q9NRJ4 1543 aa16.73■□□□□ 0.27
FARP1-230ENST00000600380 EIF3AQ14152 1382 aaKnown RBP16.73■□□□□ 0.27
FARP1-230ENST00000600380 FMN2Q9NZ56 1722 aa16.73■□□□□ 0.27
FARP1-230ENST00000600380 DDX17Q92841 729 aaKnown RBP16.72■□□□□ 0.27
FARP1-230ENST00000600380 CABP2Q9NPB3 220 aa16.72■□□□□ 0.27
FARP1-230ENST00000600380 USP32Q8NFA0 1604 aa16.71■□□□□ 0.27
FARP1-230ENST00000600380 ILDR1Q86SU0 546 aaPredicted RBP16.71■□□□□ 0.27
FARP1-230ENST00000600380 SBNO2Q9Y2G9 1366 aa16.69■□□□□ 0.26
FARP1-230ENST00000600380 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
FARP1-230ENST00000600380 NUDT16Q96DE0 195 aaKnown RBP16.69■□□□□ 0.26
FARP1-230ENST00000600380 RGPD8O14715 1765 aaPredicted RBP16.69■□□□□ 0.26
FARP1-230ENST00000600380 ROBO1Q9Y6N7 1651 aa16.69■□□□□ 0.26
FARP1-230ENST00000600380 HSPA1LP34931 641 aa16.68■□□□□ 0.26
FARP1-230ENST00000600380 DISP3Q9P2K9 1392 aa16.67■□□□□ 0.26
FARP1-230ENST00000600380 EIF4G2P78344 907 aaKnown RBP eCLIP16.67■□□□□ 0.26
FARP1-230ENST00000600380 ANKARQ7Z5J8 1434 aa16.67■□□□□ 0.26
FARP1-230ENST00000600380 EVC2Q86UK5 1308 aa16.67■□□□□ 0.26
FARP1-230ENST00000600380 ATP7BP35670 1465 aa16.67■□□□□ 0.26
FARP1-230ENST00000600380 SRPK2P78362 688 aaKnown RBP16.66■□□□□ 0.26
FARP1-230ENST00000600380 C11orf95C9JLR9 678 aaPredicted RBP16.65■□□□□ 0.26
FARP1-230ENST00000600380 PMFBP1Q8TBY8 1022 aa16.65■□□□□ 0.26
FARP1-230ENST00000600380 PHF8Q9UPP1 1060 aa16.65■□□□□ 0.26
FARP1-230ENST00000600380 FOXO3O43524 673 aa16.64■□□□□ 0.25
FARP1-230ENST00000600380 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
FARP1-230ENST00000600380 CABP1Q9NZU7 370 aa16.62■□□□□ 0.25
FARP1-230ENST00000600380 CCDC61Q9Y6R9 512 aa16.62■□□□□ 0.25
FARP1-230ENST00000600380 PLEKHG3A1L390 1219 aa16.61■□□□□ 0.25
FARP1-230ENST00000600380 ZEB1P37275 1124 aaPredicted RBP16.61■□□□□ 0.25
FARP1-230ENST00000600380 TOPAZ1Q8N9V7 1692 aa16.6■□□□□ 0.25
FARP1-230ENST00000600380 AHDC1Q5TGY3 1603 aaPredicted RBP16.59■□□□□ 0.25
FARP1-230ENST00000600380 TMF1P82094 1093 aa16.59■□□□□ 0.25
FARP1-230ENST00000600380 SLC12A5Q9H2X9 1139 aa16.59■□□□□ 0.25
FARP1-230ENST00000600380 PPIP5K1Q6PFW1 1433 aa16.59■□□□□ 0.25
FARP1-230ENST00000600380 ACEP12821 1306 aa16.58■□□□□ 0.24
FARP1-230ENST00000600380 SOS2Q07890 1332 aaPredicted RBP16.58■□□□□ 0.24
FARP1-230ENST00000600380 PXDNQ92626 1479 aa16.58■□□□□ 0.24
FARP1-230ENST00000600380 NHSL1Q5SYE7 1610 aa16.58■□□□□ 0.24
FARP1-230ENST00000600380 KRT28Q7Z3Y7 464 aa16.57■□□□□ 0.24
FARP1-230ENST00000600380 PUS7Q96PZ0 661 aaKnown RBP16.57■□□□□ 0.24
FARP1-230ENST00000600380 PHLPP1O60346 1717 aa16.56■□□□□ 0.24
FARP1-230ENST00000600380 COL16A1Q07092 1604 aaPredicted RBP16.56■□□□□ 0.24
FARP1-230ENST00000600380 POLR3AO14802 1390 aaPredicted RBP16.56■□□□□ 0.24
FARP1-230ENST00000600380 ATAD2Q6PL18 1390 aa16.56■□□□□ 0.24
FARP1-230ENST00000600380 NGDNQ8NEJ9 315 aaKnown RBP16.56■□□□□ 0.24
FARP1-230ENST00000600380 NPHP3Q7Z494 1330 aa16.55■□□□□ 0.24
FARP1-230ENST00000600380 TMC1Q8TDI8 760 aa16.55■□□□□ 0.24
FARP1-230ENST00000600380 KIF1AQ12756 1690 aa16.55■□□□□ 0.24
FARP1-230ENST00000600380 CD163L1Q9NR16 1453 aa16.54■□□□□ 0.24
FARP1-230ENST00000600380 PSME1Q06323 249 aa16.54■□□□□ 0.24
FARP1-230ENST00000600380 SLC24A1O60721 1099 aa16.53■□□□□ 0.24
FARP1-230ENST00000600380 ITSN1Q15811 1721 aa16.53■□□□□ 0.24
FARP1-230ENST00000600380 KIF7Q2M1P5 1343 aa16.52■□□□□ 0.24
FARP1-230ENST00000600380 POLR3GLQ9BT43 218 aa16.52■□□□□ 0.24
FARP1-230ENST00000600380 CPSF1Q10570 1443 aaKnown RBP16.52■□□□□ 0.23
FARP1-230ENST00000600380 SPATA31A3Q5VYP0 1347 aa16.5■□□□□ 0.23
FARP1-230ENST00000600380 SSH2Q76I76 1423 aa16.5■□□□□ 0.23
FARP1-230ENST00000600380 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
FARP1-230ENST00000600380 WASHC2AQ641Q2 1341 aa16.49■□□□□ 0.23
FARP1-230ENST00000600380 CDCA8Q53HL2 280 aa16.49■□□□□ 0.23
FARP1-230ENST00000600380 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
FARP1-230ENST00000600380 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
FARP1-230ENST00000600380 PNPLA6Q8IY17 1366 aa16.49■□□□□ 0.23
FARP1-230ENST00000600380 USP6P35125 1406 aa16.48■□□□□ 0.23
FARP1-230ENST00000600380 CARD14Q9BXL6 1004 aa16.48■□□□□ 0.23
FARP1-230ENST00000600380 MYOM1P52179 1685 aa16.48■□□□□ 0.23
FARP1-230ENST00000600380 A0A1W2PP64 1363 aa16.48■□□□□ 0.23
FARP1-230ENST00000600380 CCDC7Q96M83 1385 aa16.48■□□□□ 0.23
FARP1-230ENST00000600380 PAK3O75914 559 aaPredicted RBP16.47■□□□□ 0.23
FARP1-230ENST00000600380 JCADQ9P266 1359 aa16.47■□□□□ 0.23
FARP1-230ENST00000600380 TNS3Q68CZ2 1445 aa16.46■□□□□ 0.23
FARP1-230ENST00000600380 PLEKHG5O94827 1062 aa16.46■□□□□ 0.23
FARP1-230ENST00000600380 NUTM2GQ5VZR2 741 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms