RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, humanhuman

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP4-227ENST00000600026 WAPLQ7Z5K2 1190 aa31.21■■■□□ 2.59
LTBP4-227ENST00000600026 C14orf37Q86TY3 774 aa31.2■■■□□ 2.59
LTBP4-227ENST00000600026 MSH6P52701 1360 aa31.19■■■□□ 2.58
LTBP4-227ENST00000600026 PRAM1Q96QH2 718 aa31.18■■■□□ 2.58
LTBP4-227ENST00000600026 HSPA1LP34931 641 aa31.15■■■□□ 2.58
LTBP4-227ENST00000600026 CARD11Q9BXL7 1154 aa31.15■■■□□ 2.58
LTBP4-227ENST00000600026 QRICH2Q9H0J4 1663 aa31.14■■■□□ 2.58
LTBP4-227ENST00000600026 POGKQ9P215 609 aa31.14■■■□□ 2.58
LTBP4-227ENST00000600026 CDC42BPGQ6DT37 1551 aa31.13■■■□□ 2.57
LTBP4-227ENST00000600026 C19orf44Q9H6X5 657 aa31.13■■■□□ 2.57
LTBP4-227ENST00000600026 DCCP43146 1447 aa31.13■■■□□ 2.57
LTBP4-227ENST00000600026 SAFB2Q14151 953 aaKnown RBP eCLIP31.12■■■□□ 2.57
LTBP4-227ENST00000600026 ADGRB2O60241 1585 aa31.12■■■□□ 2.57
LTBP4-227ENST00000600026 PIP4K2BP78356 416 aa31.09■■■□□ 2.57
LTBP4-227ENST00000600026 EIF3AQ14152 1382 aaKnown RBP31.08■■■□□ 2.57
LTBP4-227ENST00000600026 SCAF1Q9H7N4 1312 aaKnown RBP31.07■■■□□ 2.56
LTBP4-227ENST00000600026 FMN2Q9NZ56 1722 aa31.07■■■□□ 2.56
LTBP4-227ENST00000600026 CENPJQ9HC77 1338 aaPredicted RBP31.05■■■□□ 2.56
LTBP4-227ENST00000600026 TOM1O60784 492 aa31.04■■■□□ 2.56
LTBP4-227ENST00000600026 ATF3P18847 181 aa31.04■■■□□ 2.56
LTBP4-227ENST00000600026 CADPS2Q86UW7 1296 aa31.04■■■□□ 2.56
LTBP4-227ENST00000600026 MINK1Q8N4C8 1332 aaPredicted RBP31.03■■■□□ 2.56
LTBP4-227ENST00000600026 MST1RQ04912 1400 aa31.02■■■□□ 2.56
LTBP4-227ENST00000600026 HIRIP3Q9BW71 556 aaPredicted RBP30.99■■■□□ 2.55
LTBP4-227ENST00000600026 USP47Q96K76 1375 aa30.99■■■□□ 2.55
LTBP4-227ENST00000600026 MED1Q15648 1581 aaPredicted RBP30.99■■■□□ 2.55
LTBP4-227ENST00000600026 ROBO1Q9Y6N7 1651 aa30.97■■■□□ 2.55
LTBP4-227ENST00000600026 RGPD8O14715 1765 aaPredicted RBP30.96■■■□□ 2.55
LTBP4-227ENST00000600026 C1orf167Q5SNV9 1468 aa30.95■■■□□ 2.54
LTBP4-227ENST00000600026 USP32Q8NFA0 1604 aa30.95■■■□□ 2.54
LTBP4-227ENST00000600026 TULP4Q9NRJ4 1543 aa30.94■■■□□ 2.54
LTBP4-227ENST00000600026 SLAIN2Q9P270 581 aa30.94■■■□□ 2.54
LTBP4-227ENST00000600026 SBNO2Q9Y2G9 1366 aa30.92■■■□□ 2.54
LTBP4-227ENST00000600026 WASLO00401 505 aaPredicted RBP30.91■■■□□ 2.54
LTBP4-227ENST00000600026 ST20-MTHFSA0A0A6YYL1 179 aa30.89■■■□□ 2.54
LTBP4-227ENST00000600026 NUTM2FA1L443 756 aa30.88■■■□□ 2.53
LTBP4-227ENST00000600026 ITSN1Q15811 1721 aa30.87■■■□□ 2.53
LTBP4-227ENST00000600026 ANKARQ7Z5J8 1434 aa30.87■■■□□ 2.53
LTBP4-227ENST00000600026 TOPAZ1Q8N9V7 1692 aa30.85■■■□□ 2.53
LTBP4-227ENST00000600026 ATP7BP35670 1465 aa30.85■■■□□ 2.53
LTBP4-227ENST00000600026 CDK19Q9BWU1 502 aa30.85■■■□□ 2.53
LTBP4-227ENST00000600026 EIF4G2P78344 907 aaKnown RBP eCLIP30.84■■■□□ 2.531e-6■■■■□ 19.5
LTBP4-227ENST00000600026 KIF1AQ12756 1690 aa30.84■■■□□ 2.53
LTBP4-227ENST00000600026 NHSL1Q5SYE7 1610 aa30.83■■■□□ 2.53
LTBP4-227ENST00000600026 PRR36Q9H6K5 1346 aa30.82■■■□□ 2.52
LTBP4-227ENST00000600026 BRINP3Q76B58 766 aa30.82■■■□□ 2.52
LTBP4-227ENST00000600026 TESK2Q96S53 571 aa30.82■■■□□ 2.52
LTBP4-227ENST00000600026 EVC2Q86UK5 1308 aa30.81■■■□□ 2.52
LTBP4-227ENST00000600026 ORAI2Q96SN7 254 aa30.8■■■□□ 2.52
LTBP4-227ENST00000600026 AHDC1Q5TGY3 1603 aaPredicted RBP30.79■■■□□ 2.52
LTBP4-227ENST00000600026 HSPA5P11021 654 aaKnown RBP30.78■■■□□ 2.52
LTBP4-227ENST00000600026 SRPK2P78362 688 aaKnown RBP30.78■■■□□ 2.52
LTBP4-227ENST00000600026 PHF23Q9BUL5 403 aaPredicted RBP30.78■■■□□ 2.52
LTBP4-227ENST00000600026 PHLPP1O60346 1717 aa30.78■■■□□ 2.52
LTBP4-227ENST00000600026 ESCO1Q5FWF5 840 aa30.77■■■□□ 2.52
LTBP4-227ENST00000600026 CABP2Q9NPB3 220 aa30.77■■■□□ 2.52
LTBP4-227ENST00000600026 NUDT16Q96DE0 195 aaKnown RBP30.76■■■□□ 2.51
LTBP4-227ENST00000600026 SLC24A1O60721 1099 aa30.71■■■□□ 2.51
LTBP4-227ENST00000600026 PHF8Q9UPP1 1060 aa30.71■■■□□ 2.51
LTBP4-227ENST00000600026 COL16A1Q07092 1604 aaPredicted RBP30.71■■■□□ 2.51
LTBP4-227ENST00000600026 TMF1P82094 1093 aa30.69■■■□□ 2.5
LTBP4-227ENST00000600026 PPIP5K1Q6PFW1 1433 aa30.69■■■□□ 2.5
LTBP4-227ENST00000600026 ATAD2Q6PL18 1390 aa30.68■■■□□ 2.5
LTBP4-227ENST00000600026 DDX17Q92841 729 aaKnown RBP30.68■■■□□ 2.5
LTBP4-227ENST00000600026 CCDC61Q9Y6R9 512 aa30.68■■■□□ 2.5
LTBP4-227ENST00000600026 PMFBP1Q8TBY8 1022 aa30.67■■■□□ 2.5
LTBP4-227ENST00000600026 RGS17Q9UGC6 210 aaPredicted RBP30.67■■■□□ 2.5
LTBP4-227ENST00000600026 PXDNQ92626 1479 aa30.64■■■□□ 2.5
LTBP4-227ENST00000600026 NPHP3Q7Z494 1330 aa30.64■■■□□ 2.5
LTBP4-227ENST00000600026 PUS7Q96PZ0 661 aaKnown RBP30.63■■■□□ 2.49
LTBP4-227ENST00000600026 FOXO3O43524 673 aa30.62■■■□□ 2.49
LTBP4-227ENST00000600026 AKAP12Q02952 1782 aa30.61■■■□□ 2.49
LTBP4-227ENST00000600026 PLEKHG3A1L390 1219 aa30.6■■■□□ 2.49
LTBP4-227ENST00000600026 TRPM3Q9HCF6 1732 aaPredicted RBP30.59■■■□□ 2.49
LTBP4-227ENST00000600026 MYOM1P52179 1685 aa30.59■■■□□ 2.49
LTBP4-227ENST00000600026 POLR3AO14802 1390 aaPredicted RBP30.59■■■□□ 2.49
LTBP4-227ENST00000600026 SOS2Q07890 1332 aaPredicted RBP30.59■■■□□ 2.49
LTBP4-227ENST00000600026 NGDNQ8NEJ9 315 aaKnown RBP30.58■■■□□ 2.49
LTBP4-227ENST00000600026 CABP1Q9NZU7 370 aa30.58■■■□□ 2.49
LTBP4-227ENST00000600026 XPCQ01831 940 aaPredicted RBP30.57■■■□□ 2.48
LTBP4-227ENST00000600026 CDCA8Q53HL2 280 aa30.57■■■□□ 2.48
LTBP4-227ENST00000600026 ACEP12821 1306 aa30.56■■■□□ 2.48
LTBP4-227ENST00000600026 ZNF316A6NFI3 1004 aaPredicted RBP30.55■■■□□ 2.48
LTBP4-227ENST00000600026 MON2Q7Z3U7 1717 aa30.55■■■□□ 2.48
LTBP4-227ENST00000600026 KRT28Q7Z3Y7 464 aa30.54■■■□□ 2.48
LTBP4-227ENST00000600026 SHPRHQ149N8 1683 aa30.54■■■□□ 2.48
LTBP4-227ENST00000600026 PSME1Q06323 249 aa30.53■■■□□ 2.48
LTBP4-227ENST00000600026 NINLQ9Y2I6 1382 aa30.53■■■□□ 2.48
LTBP4-227ENST00000600026 TMC1Q8TDI8 760 aa30.52■■■□□ 2.48
LTBP4-227ENST00000600026 CD163L1Q9NR16 1453 aa30.51■■■□□ 2.48
LTBP4-227ENST00000600026 NRKQ7Z2Y5 1582 aa30.5■■■□□ 2.47
LTBP4-227ENST00000600026 ALS2Q96Q42 1657 aa30.5■■■□□ 2.47
LTBP4-227ENST00000600026 C11orf95C9JLR9 678 aaPredicted RBP30.5■■■□□ 2.47
LTBP4-227ENST00000600026 SLC12A5Q9H2X9 1139 aa30.49■■■□□ 2.47
LTBP4-227ENST00000600026 SBNO1A3KN83 1393 aa30.49■■■□□ 2.47
LTBP4-227ENST00000600026 CPSF1Q10570 1443 aaKnown RBP30.48■■■□□ 2.47
LTBP4-227ENST00000600026 TNS3Q68CZ2 1445 aa30.48■■■□□ 2.47
LTBP4-227ENST00000600026 LRRC59Q96AG4 307 aaKnown RBP30.48■■■□□ 2.47
LTBP4-227ENST00000600026 USP6P35125 1406 aa30.47■■■□□ 2.47
LTBP4-227ENST00000600026 JCADQ9P266 1359 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms