RNA–Protein interactions for RNA: ENST00000599389.1

CEACAM1-213, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CEACAM1, Length 1,342 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-213ENST00000599389 SLIT2O94813 1529 aa11.24□□□□□ -0.61
CEACAM1-213ENST00000599389 PXDNQ92626 1479 aa11.24□□□□□ -0.61
CEACAM1-213ENST00000599389 HRCP23327 699 aa11.23□□□□□ -0.61
CEACAM1-213ENST00000599389 GJD4Q96KN9 370 aaPredicted RBP11.23□□□□□ -0.61
CEACAM1-213ENST00000599389 ANKRD50Q9ULJ7 1429 aa11.22□□□□□ -0.61
CEACAM1-213ENST00000599389 CEP350Q5VT06 3117 aa11.21□□□□□ -0.61
CEACAM1-213ENST00000599389 USP32Q8NFA0 1604 aa11.2□□□□□ -0.62
CEACAM1-213ENST00000599389 NWD2Q9ULI1 1742 aa11.19□□□□□ -0.62
CEACAM1-213ENST00000599389 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
CEACAM1-213ENST00000599389 NEXMIFQ5QGS0 1516 aa11.18□□□□□ -0.62
CEACAM1-213ENST00000599389 ORAI2Q96SN7 254 aa11.18□□□□□ -0.62
CEACAM1-213ENST00000599389 RGPD1P0DJD0 1748 aa11.18□□□□□ -0.62
CEACAM1-213ENST00000599389 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
CEACAM1-213ENST00000599389 PLCH1Q4KWH8 1693 aa11.18□□□□□ -0.62
CEACAM1-213ENST00000599389 PSDA5PKW4 1024 aaPredicted RBP11.17□□□□□ -0.62
CEACAM1-213ENST00000599389 CHGAP10645 457 aaKnown RBP11.17□□□□□ -0.62
CEACAM1-213ENST00000599389 CHIC2Q9UKJ5 165 aa11.17□□□□□ -0.62
CEACAM1-213ENST00000599389 DISP2A7MBM2 1401 aa11.17□□□□□ -0.62
CEACAM1-213ENST00000599389 ABCA3Q99758 1704 aa11.16□□□□□ -0.62
CEACAM1-213ENST00000599389 ROBO2Q9HCK4 1378 aa11.15□□□□□ -0.62
CEACAM1-213ENST00000599389 CACNB1Q02641 598 aaPredicted RBP11.15□□□□□ -0.62
CEACAM1-213ENST00000599389 UNC5CLQ8IV45 518 aa11.15□□□□□ -0.62
CEACAM1-213ENST00000599389 ONECUT3O60422 494 aaPredicted RBP11.14□□□□□ -0.63
CEACAM1-213ENST00000599389 SF3B2Q13435 895 aaKnown RBP11.14□□□□□ -0.63
CEACAM1-213ENST00000599389 NPHP3Q7Z494 1330 aa11.14□□□□□ -0.63
CEACAM1-213ENST00000599389 NRAPQ86VF7 1730 aa11.14□□□□□ -0.63
CEACAM1-213ENST00000599389 YY1P25490 414 aa11.13□□□□□ -0.63
CEACAM1-213ENST00000599389 SEPT12Q8IYM1 358 aa11.13□□□□□ -0.63
CEACAM1-213ENST00000599389 HFM1A2PYH4 1435 aa11.12□□□□□ -0.63
CEACAM1-213ENST00000599389 BAG6P46379 1132 aa11.11□□□□□ -0.63
CEACAM1-213ENST00000599389 CLTCL1P53675 1640 aa11.11□□□□□ -0.63
CEACAM1-213ENST00000599389 RREB1Q92766 1687 aa11.11□□□□□ -0.63
CEACAM1-213ENST00000599389 VPS72Q15906 364 aa11.1□□□□□ -0.63
CEACAM1-213ENST00000599389 KRT27Q7Z3Y8 459 aa11.1□□□□□ -0.63
CEACAM1-213ENST00000599389 KIF1AQ12756 1690 aa11.1□□□□□ -0.63
CEACAM1-213ENST00000599389 THSD7AQ9UPZ6 1657 aa11.1□□□□□ -0.63
CEACAM1-213ENST00000599389 R3HDM1Q15032 1099 aaKnown RBP11.09□□□□□ -0.63
CEACAM1-213ENST00000599389 ADGRB2O60241 1585 aa11.08□□□□□ -0.63
CEACAM1-213ENST00000599389 NUP188Q5SRE5 1749 aa11.08□□□□□ -0.64
CEACAM1-213ENST00000599389 FMN2Q9NZ56 1722 aa11.08□□□□□ -0.64
CEACAM1-213ENST00000599389 SPATA31A3Q5VYP0 1347 aa11.07□□□□□ -0.64
CEACAM1-213ENST00000599389 KIF1BO60333 1816 aa11.07□□□□□ -0.64
CEACAM1-213ENST00000599389 CCDC144AA2RUR9 1427 aa11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 FOXO3O43524 673 aa11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 XPCQ01831 940 aaPredicted RBP11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 IFFO2Q5TF58 517 aa11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 LRPPRCP42704 1394 aaKnown RBP11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 ROCK1Q13464 1354 aa11.06□□□□□ -0.64
CEACAM1-213ENST00000599389 CAMTA1Q9Y6Y1 1673 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 ESCO1Q5FWF5 840 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 TECPR2O15040 1411 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 NAIPQ13075 1403 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 TNS3Q68CZ2 1445 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 KNDC1Q76NI1 1749 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 PPLO60437 1756 aa11.05□□□□□ -0.64
CEACAM1-213ENST00000599389 GOLGB1Q14789 3259 aaKnown RBP11.04□□□□□ -0.64
CEACAM1-213ENST00000599389 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
CEACAM1-213ENST00000599389 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
CEACAM1-213ENST00000599389 NUP155O75694 1391 aa11.03□□□□□ -0.64
CEACAM1-213ENST00000599389 PARD3Q8TEW0 1356 aa11.03□□□□□ -0.64
CEACAM1-213ENST00000599389 ZNF326Q5BKZ1 582 aaKnown RBP11.02□□□□□ -0.65
CEACAM1-213ENST00000599389 CAMKK2Q96RR4 588 aa11.02□□□□□ -0.65
CEACAM1-213ENST00000599389 RGPD8O14715 1765 aaPredicted RBP11.02□□□□□ -0.65
CEACAM1-213ENST00000599389 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.65
CEACAM1-213ENST00000599389 IFT172Q9UG01 1749 aa11.02□□□□□ -0.65
CEACAM1-213ENST00000599389 CRYBG1Q9Y4K1 1723 aa11.01□□□□□ -0.65
CEACAM1-213ENST00000599389 EZH2Q15910 746 aaKnown RBP11□□□□□ -0.65
CEACAM1-213ENST00000599389 TRPM3Q9HCF6 1732 aaPredicted RBP11□□□□□ -0.65
CEACAM1-213ENST00000599389 CHD4Q14839 1912 aa10.99□□□□□ -0.65
CEACAM1-213ENST00000599389 SBNO1A3KN83 1393 aa10.98□□□□□ -0.65
CEACAM1-213ENST00000599389 CASZ1Q86V15 1759 aa10.98□□□□□ -0.65
CEACAM1-213ENST00000599389 ALS2Q96Q42 1657 aa10.98□□□□□ -0.65
CEACAM1-213ENST00000599389 NRXN1Q9ULB1 1477 aa10.98□□□□□ -0.65
CEACAM1-213ENST00000599389 FAM98CQ17RN3 349 aaKnown RBP10.98□□□□□ -0.65
CEACAM1-213ENST00000599389 RRBP1Q9P2E9 1410 aaKnown RBP10.98□□□□□ -0.65
CEACAM1-213ENST00000599389 FAM182BQ5T319 152 aa10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 ZNF784Q8NCA9 323 aaPredicted RBP10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 CABLES1Q8TDN4 633 aa10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 CCDC9Q9Y3X0 531 aaKnown RBP10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 RGPD3A6NKT7 1758 aaPredicted RBP10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 RGPD4Q7Z3J3 1758 aa10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 ARHGEF10O15013 1369 aa10.97□□□□□ -0.65
CEACAM1-213ENST00000599389 FAM83GA6ND36 823 aa10.96□□□□□ -0.65
CEACAM1-213ENST00000599389 FAM50AQ14320 339 aaKnown RBP10.96□□□□□ -0.65
CEACAM1-213ENST00000599389 KRT28Q7Z3Y7 464 aa10.96□□□□□ -0.65
CEACAM1-213ENST00000599389 SPATA31A5Q5VU36 1347 aa10.95□□□□□ -0.66
CEACAM1-213ENST00000599389 SPATA31A7Q8IWB4 1347 aa10.95□□□□□ -0.66
CEACAM1-213ENST00000599389 NRKQ7Z2Y5 1582 aa10.95□□□□□ -0.66
CEACAM1-213ENST00000599389 VGFO15240 615 aaPredicted RBP10.95□□□□□ -0.66
CEACAM1-213ENST00000599389 PLEKHH1Q9ULM0 1364 aa10.95□□□□□ -0.66
CEACAM1-213ENST00000599389 SENP3-EIF4A1A0A087X0R7 540 aa10.94□□□□□ -0.66
CEACAM1-213ENST00000599389 A0A0G2JS52 829 aa10.94□□□□□ -0.66
CEACAM1-213ENST00000599389 MYT1Q01538 1121 aa10.94□□□□□ -0.66
CEACAM1-213ENST00000599389 MYOM1P52179 1685 aa10.94□□□□□ -0.66
CEACAM1-213ENST00000599389 RPGRIP1LQ68CZ1 1315 aa10.94□□□□□ -0.66
CEACAM1-213ENST00000599389 SPON1Q9HCB6 807 aa10.93□□□□□ -0.66
CEACAM1-213ENST00000599389 ABCC11Q96J66 1382 aa10.93□□□□□ -0.66
CEACAM1-213ENST00000599389 NUTM2FA1L443 756 aa10.92□□□□□ -0.66
CEACAM1-213ENST00000599389 HAP1P54257 671 aaPredicted RBP10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms