RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, human

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC00343-208	ENST00000599264	LIAT1	Q6ZQX7	453 aa		13.98	□□□□□ -0.17
LINC00343-208	ENST00000599264	NRG2	O14511	850 aa	Predicted RBP	13.97	□□□□□ -0.17
LINC00343-208	ENST00000599264	GUCA2A	Q02747	115 aa		13.97	□□□□□ -0.17
LINC00343-208	ENST00000599264		Q6ZNB5	142 aa		13.97	□□□□□ -0.17
LINC00343-208	ENST00000599264	PRDM9	Q9NQV7	894 aa		13.97	□□□□□ -0.17
LINC00343-208	ENST00000599264	PDZRN3	Q9UPQ7	1066 aa		13.97	□□□□□ -0.17
LINC00343-208	ENST00000599264	RPIA	P49247	311 aa		13.96	□□□□□ -0.17
LINC00343-208	ENST00000599264	EMID1	Q96A84	441 aa	Predicted RBP	13.96	□□□□□ -0.17
LINC00343-208	ENST00000599264	ZBTB24	O43167	697 aa	Predicted RBP	13.95	□□□□□ -0.18
LINC00343-208	ENST00000599264	MMP16	P51512	607 aa		13.95	□□□□□ -0.18
LINC00343-208	ENST00000599264	PLA2G2C	Q5R387	149 aa		13.95	□□□□□ -0.18
LINC00343-208	ENST00000599264	ZNF697	Q5TEC3	545 aa		13.95	□□□□□ -0.18
LINC00343-208	ENST00000599264	CD2BP2	O95400	341 aa	Known RBP	13.94	□□□□□ -0.18
LINC00343-208	ENST00000599264	C6orf229	H3BNL8	230 aa		13.93	□□□□□ -0.18
LINC00343-208	ENST00000599264	RETREG3	Q86VR2	466 aa		13.93	□□□□□ -0.18
LINC00343-208	ENST00000599264	MS4A1	P11836	297 aa		13.92	□□□□□ -0.18
LINC00343-208	ENST00000599264	TBC1D2	Q9BYX2	928 aa		13.92	□□□□□ -0.18
LINC00343-208	ENST00000599264	MOXD2P	A6NHM9	499 aa		13.91	□□□□□ -0.18
LINC00343-208	ENST00000599264	DXO	O77932	396 aa	Known RBP	13.91	□□□□□ -0.18
LINC00343-208	ENST00000599264	NDUFV2	P19404	249 aa		13.9	□□□□□ -0.18
LINC00343-208	ENST00000599264	GJA5	P36382	358 aa		13.9	□□□□□ -0.18
LINC00343-208	ENST00000599264	SYMPK	Q92797	1274 aa	Known RBP	13.89	□□□□□ -0.19
LINC00343-208	ENST00000599264	SPDYE5	A6NIY4	337 aa		13.88	□□□□□ -0.19
LINC00343-208	ENST00000599264	JUND	P17535	347 aa		13.88	□□□□□ -0.19
LINC00343-208	ENST00000599264	PCDHGC3	Q9UN70	934 aa		13.88	□□□□□ -0.19
LINC00343-208	ENST00000599264	PRR20E	P86478	221 aa		13.87	□□□□□ -0.19
LINC00343-208	ENST00000599264	PRR20C	P86479	221 aa		13.87	□□□□□ -0.19
LINC00343-208	ENST00000599264	PRR20D	P86480	221 aa		13.87	□□□□□ -0.19
LINC00343-208	ENST00000599264	PRR20B	P86481	221 aa		13.87	□□□□□ -0.19
LINC00343-208	ENST00000599264	PRR20A	P86496	221 aa		13.87	□□□□□ -0.19
LINC00343-208	ENST00000599264	CCDC24	Q8N4L8	307 aa		13.86	□□□□□ -0.19
LINC00343-208	ENST00000599264	MTMR2	Q13614	643 aa		13.85	□□□□□ -0.19
LINC00343-208	ENST00000599264	RSBN1L	Q6PCB5	846 aa	Predicted RBP	13.84	□□□□□ -0.19
LINC00343-208	ENST00000599264	TRIM67	Q6ZTA4	783 aa		13.83	□□□□□ -0.2
LINC00343-208	ENST00000599264	SPTLC1	O15269	473 aa		13.82	□□□□□ -0.2
LINC00343-208	ENST00000599264	GDF9	O60383	454 aa		13.82	□□□□□ -0.2
LINC00343-208	ENST00000599264	FOXC1	Q12948	553 aa		13.81	□□□□□ -0.2
LINC00343-208	ENST00000599264	TRAF7	Q6Q0C0	670 aa		13.81	□□□□□ -0.2
LINC00343-208	ENST00000599264	RIC3	Q7Z5B4	369 aa		13.81	□□□□□ -0.2
LINC00343-208	ENST00000599264	TNFRSF10A	O00220	468 aa		13.8	□□□□□ -0.2
LINC00343-208	ENST00000599264	NUDT12	Q9BQG2	462 aa		13.8	□□□□□ -0.2
LINC00343-208	ENST00000599264	TRIM32	Q13049	653 aa		13.79	□□□□□ -0.2
LINC00343-208	ENST00000599264	PRR7	Q8TB68	274 aa		13.79	□□□□□ -0.2
LINC00343-208	ENST00000599264	RSPH6A	Q9H0K4	717 aa		13.79	□□□□□ -0.2
LINC00343-208	ENST00000599264	ZBTB3	Q9H5J0	574 aa		13.79	□□□□□ -0.2
LINC00343-208	ENST00000599264	PKDCC	Q504Y2	493 aa		13.78	□□□□□ -0.2
LINC00343-208	ENST00000599264	PRPF38B	Q5VTL8	546 aa	Known RBP	13.77	□□□□□ -0.21
LINC00343-208	ENST00000599264	DESI1	Q6ICB0	168 aa		13.77	□□□□□ -0.21
LINC00343-208	ENST00000599264	DGAT1	O75907	488 aa		13.76	□□□□□ -0.21
LINC00343-208	ENST00000599264	PKD2L1	Q9P0L9	805 aa		13.76	□□□□□ -0.21
LINC00343-208	ENST00000599264	PTPRN	Q16849	979 aa		13.75	□□□□□ -0.21
LINC00343-208	ENST00000599264	MYSM1	Q5VVJ2	828 aa		13.75	□□□□□ -0.21
LINC00343-208	ENST00000599264	PCDHB15	Q9Y5E8	787 aa		13.75	□□□□□ -0.21
LINC00343-208	ENST00000599264	CCNYL3	P0C7X3	344 aa		13.74	□□□□□ -0.21
LINC00343-208	ENST00000599264	CSPP1	Q1MSJ5	1256 aa		13.73	□□□□□ -0.21
LINC00343-208	ENST00000599264	TUSC1	Q2TAM9	212 aa		13.73	□□□□□ -0.21
LINC00343-208	ENST00000599264	CYP4X1	Q8N118	509 aa		13.73	□□□□□ -0.21
LINC00343-208	ENST00000599264	FAM187A	A6NFU0	413 aa		13.72	□□□□□ -0.21
LINC00343-208	ENST00000599264	HRC	P23327	699 aa		13.72	□□□□□ -0.21
LINC00343-208	ENST00000599264	WNT7A	O00755	349 aa		13.71	□□□□□ -0.21
LINC00343-208	ENST00000599264	WNT7B	P56706	349 aa		13.71	□□□□□ -0.21
LINC00343-208	ENST00000599264	DDRGK1	Q96HY6	314 aa		13.71	□□□□□ -0.21
LINC00343-208	ENST00000599264	KDM4C	Q9H3R0	1056 aa		13.71	□□□□□ -0.21
LINC00343-208	ENST00000599264	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00343-208	ENST00000599264	NUTM2E	B1AL46	878 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00343-208	ENST00000599264	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00343-208	ENST00000599264	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.7	□□□□□ -0.22
LINC00343-208	ENST00000599264	EVA1B	Q9NVM1	165 aa		13.7	□□□□□ -0.22
LINC00343-208	ENST00000599264	CLK2	P49760	499 aa	Known RBP	13.69	□□□□□ -0.22
LINC00343-208	ENST00000599264	TTC24	A2A3L6	582 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00343-208	ENST00000599264	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.68	□□□□□ -0.22
LINC00343-208	ENST00000599264	LIMD1	Q9UGP4	676 aa		13.68	□□□□□ -0.22
LINC00343-208	ENST00000599264	CABLES1	Q8TDN4	633 aa		13.67	□□□□□ -0.22
LINC00343-208	ENST00000599264	CFAP99	D6REC4	459 aa		13.66	□□□□□ -0.22
LINC00343-208	ENST00000599264	KCNH2	Q12809	1159 aa		13.66	□□□□□ -0.22
LINC00343-208	ENST00000599264	LYPD8	Q6UX82	237 aa		13.66	□□□□□ -0.22
LINC00343-208	ENST00000599264	TOR4A	Q9NXH8	423 aa		13.66	□□□□□ -0.22
LINC00343-208	ENST00000599264	PTCRA	Q6ISU1	281 aa	Predicted RBP	13.65	□□□□□ -0.22
LINC00343-208	ENST00000599264	POLR3E	Q9NVU0	708 aa		13.65	□□□□□ -0.22
LINC00343-208	ENST00000599264	LILRB3	O75022	631 aa		13.64	□□□□□ -0.23
LINC00343-208	ENST00000599264	RC3H1	Q5TC82	1133 aa	Known RBP	13.64	□□□□□ -0.23
LINC00343-208	ENST00000599264	SNIP1	Q8TAD8	396 aa	Known RBP	13.64	□□□□□ -0.23
LINC00343-208	ENST00000599264	UNC93B1	Q9H1C4	597 aa		13.64	□□□□□ -0.23
LINC00343-208	ENST00000599264	LCE2B	O14633	110 aa		13.63	□□□□□ -0.23
LINC00343-208	ENST00000599264	CTH	P32929	405 aa		13.63	□□□□□ -0.23
LINC00343-208	ENST00000599264	QPCT	Q16769	361 aa		13.63	□□□□□ -0.23
LINC00343-208	ENST00000599264	TSC1	Q92574	1164 aa		13.63	□□□□□ -0.23
LINC00343-208	ENST00000599264	MRGPRX2	Q96LB1	330 aa		13.63	□□□□□ -0.23
LINC00343-208	ENST00000599264	ATP1B4	Q9UN42	357 aa	Predicted RBP	13.63	□□□□□ -0.23
LINC00343-208	ENST00000599264	MYT1	Q01538	1121 aa		13.62	□□□□□ -0.23
LINC00343-208	ENST00000599264	HELB	Q8NG08	1087 aa	Predicted RBP	13.62	□□□□□ -0.23
LINC00343-208	ENST00000599264	SKOR1	P84550	965 aa		13.61	□□□□□ -0.23
LINC00343-208	ENST00000599264	SKIV2L	Q15477	1246 aa	Known RBP	13.61	□□□□□ -0.23
LINC00343-208	ENST00000599264	FAM117A	Q9C073	453 aa		13.61	□□□□□ -0.23
LINC00343-208	ENST00000599264	SH3D19	Q5HYK7	790 aa		13.6	□□□□□ -0.23
LINC00343-208	ENST00000599264	EHBP1	Q8NDI1	1231 aa		13.59	□□□□□ -0.23
LINC00343-208	ENST00000599264	SH3BP2	P78314	561 aa		13.56	□□□□□ -0.24
LINC00343-208	ENST00000599264	AVP	P01185	164 aa		13.55	□□□□□ -0.24
LINC00343-208	ENST00000599264	NEUROD2	Q15784	382 aa		13.55	□□□□□ -0.24
LINC00343-208	ENST00000599264	RTL5	Q5HYW3	569 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 159.7 ms