RNA–Protein interactions for RNA: ENST00000598452.1

SNRPA-204, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 679 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-204ENST00000598452 ADAMTS2O95450 1211 aa28.05■■■□□ 2.08
SNRPA-204ENST00000598452 LRPPRCP42704 1394 aaKnown RBP28.05■■■□□ 2.08
SNRPA-204ENST00000598452 ESCO1Q5FWF5 840 aa28.04■■■□□ 2.08
SNRPA-204ENST00000598452 IFT172Q9UG01 1749 aa28.04■■■□□ 2.08
SNRPA-204ENST00000598452 LAMC1P11047 1609 aa28.03■■■□□ 2.08
SNRPA-204ENST00000598452 PIK3C2GO75747 1445 aa28.03■■■□□ 2.08
SNRPA-204ENST00000598452 PLEKHH1Q9ULM0 1364 aa28.03■■■□□ 2.08
SNRPA-204ENST00000598452 TECPR2O15040 1411 aa28.02■■■□□ 2.08
SNRPA-204ENST00000598452 NUTM2FA1L443 756 aa28.02■■■□□ 2.08
SNRPA-204ENST00000598452 ABCC11Q96J66 1382 aa28.01■■■□□ 2.07
SNRPA-204ENST00000598452 CDC42BPGQ6DT37 1551 aa28.01■■■□□ 2.07
SNRPA-204ENST00000598452 RAB3GAP2Q9H2M9 1393 aa27.99■■■□□ 2.07
SNRPA-204ENST00000598452 NGLY1Q96IV0 654 aa27.99■■■□□ 2.07
SNRPA-204ENST00000598452 QTRT2Q9H974 415 aaKnown RBP27.99■■■□□ 2.07
SNRPA-204ENST00000598452 XPCQ01831 940 aaPredicted RBP27.98■■■□□ 2.07
SNRPA-204ENST00000598452 FOXO3O43524 673 aa27.97■■■□□ 2.07
SNRPA-204ENST00000598452 UPF1Q92900 1129 aaKnown RBP eCLIP27.97■■■□□ 2.07
SNRPA-204ENST00000598452 YTHDC2Q9H6S0 1430 aaKnown RBP27.97■■■□□ 2.07
SNRPA-204ENST00000598452 NPHP3Q7Z494 1330 aa27.96■■■□□ 2.07
SNRPA-204ENST00000598452 C14orf93Q9H972 538 aaKnown RBP27.96■■■□□ 2.07
SNRPA-204ENST00000598452 CFAP70Q5T0N1 1121 aa27.95■■■□□ 2.06
SNRPA-204ENST00000598452 CDK12Q9NYV4 1490 aaPredicted RBP27.94■■■□□ 2.06
SNRPA-204ENST00000598452 PXDNQ92626 1479 aa27.92■■■□□ 2.06
SNRPA-204ENST00000598452 RBM6P78332 1123 aaKnown RBP27.92■■■□□ 2.06
SNRPA-204ENST00000598452 KNDC1Q76NI1 1749 aa27.92■■■□□ 2.06
SNRPA-204ENST00000598452 NRXN1Q9ULB1 1477 aa27.9■■■□□ 2.06
SNRPA-204ENST00000598452 USP21Q9UK80 565 aa27.89■■■□□ 2.06
SNRPA-204ENST00000598452 RGS12O14924 1447 aa27.89■■■□□ 2.06
SNRPA-204ENST00000598452 SIRT1Q96EB6 747 aa27.88■■■□□ 2.05
SNRPA-204ENST00000598452 MYOM2P54296 1465 aa27.88■■■□□ 2.05
SNRPA-204ENST00000598452 DHX57Q6P158 1386 aaKnown RBP27.86■■■□□ 2.05
SNRPA-204ENST00000598452 COL22A1Q8NFW1 1626 aaPredicted RBP27.86■■■□□ 2.05
SNRPA-204ENST00000598452 SAFB2Q14151 953 aaKnown RBP eCLIP27.85■■■□□ 2.05
SNRPA-204ENST00000598452 FNBP4Q8N3X1 1017 aaPredicted RBP27.85■■■□□ 2.05
SNRPA-204ENST00000598452 PRAM1Q96QH2 718 aa27.84■■■□□ 2.05
SNRPA-204ENST00000598452 FMN2Q9NZ56 1722 aa27.84■■■□□ 2.05
SNRPA-204ENST00000598452 TRPC5Q9UL62 973 aaPredicted RBP27.81■■■□□ 2.04
SNRPA-204ENST00000598452 SPATA31A3Q5VYP0 1347 aa27.79■■■□□ 2.04
SNRPA-204ENST00000598452 KRT28Q7Z3Y7 464 aa27.79■■■□□ 2.04
SNRPA-204ENST00000598452 KDM2AQ9Y2K7 1162 aa27.79■■■□□ 2.04
SNRPA-204ENST00000598452 PHF8Q9UPP1 1060 aa27.78■■■□□ 2.04
SNRPA-204ENST00000598452 POGKQ9P215 609 aa27.77■■■□□ 2.04
SNRPA-204ENST00000598452 ATRNO75882 1429 aa27.76■■■□□ 2.04
SNRPA-204ENST00000598452 DCAF11Q8TEB1 546 aa27.75■■■□□ 2.03
SNRPA-204ENST00000598452 BCL9LQ86UU0 1499 aa27.75■■■□□ 2.03
SNRPA-204ENST00000598452 KIF1AQ12756 1690 aa27.75■■■□□ 2.03
SNRPA-204ENST00000598452 TRAK1Q9UPV9 953 aa27.74■■■□□ 2.03
SNRPA-204ENST00000598452 ADGRB1O14514 1584 aa27.73■■■□□ 2.03
SNRPA-204ENST00000598452 DLC1Q96QB1 1528 aa27.72■■■□□ 2.03
SNRPA-204ENST00000598452 RGPD8O14715 1765 aaPredicted RBP27.71■■■□□ 2.03
SNRPA-204ENST00000598452 PLEKHG5O94827 1062 aa27.71■■■□□ 2.03
SNRPA-204ENST00000598452 HIRIP3Q9BW71 556 aaPredicted RBP27.71■■■□□ 2.03
SNRPA-204ENST00000598452 HRCP23327 699 aa27.7■■■□□ 2.02
SNRPA-204ENST00000598452 PSME1Q06323 249 aa27.69■■■□□ 2.02
SNRPA-204ENST00000598452 PMFBP1Q8TBY8 1022 aa27.69■■■□□ 2.02
SNRPA-204ENST00000598452 CABLES1Q8TDN4 633 aa27.69■■■□□ 2.02
SNRPA-204ENST00000598452 TNS3Q68CZ2 1445 aa27.67■■■□□ 2.02
SNRPA-204ENST00000598452 MARF1Q9Y4F3 1742 aaKnown RBP27.67■■■□□ 2.02
SNRPA-204ENST00000598452 LMOD2Q6P5Q4 547 aa27.67■■■□□ 2.02
SNRPA-204ENST00000598452 MINK1Q8N4C8 1332 aaPredicted RBP27.67■■■□□ 2.02
SNRPA-204ENST00000598452 GJD4Q96KN9 370 aaPredicted RBP27.66■■■□□ 2.02
SNRPA-204ENST00000598452 ATAD2Q6PL18 1390 aa27.65■■■□□ 2.02
SNRPA-204ENST00000598452 HAP1P54257 671 aaPredicted RBP27.65■■■□□ 2.02
SNRPA-204ENST00000598452 USP32Q8NFA0 1604 aa27.64■■■□□ 2.02
SNRPA-204ENST00000598452 UNC5CLQ8IV45 518 aa27.64■■■□□ 2.02
SNRPA-204ENST00000598452 ANKARQ7Z5J8 1434 aa27.64■■■□□ 2.02
SNRPA-204ENST00000598452 SBNO1A3KN83 1393 aa27.63■■■□□ 2.01
SNRPA-204ENST00000598452 SLIT2O94813 1529 aa27.63■■■□□ 2.01
SNRPA-204ENST00000598452 PRR36Q9H6K5 1346 aa27.63■■■□□ 2.01
SNRPA-204ENST00000598452 ADGRB2O60241 1585 aa27.62■■■□□ 2.01
SNRPA-204ENST00000598452 STAC3Q96MF2 364 aa27.61■■■□□ 2.01
SNRPA-204ENST00000598452 WASLO00401 505 aaPredicted RBP27.59■■■□□ 2.01
SNRPA-204ENST00000598452 RALGAPBQ86X10 1494 aa27.57■■■□□ 2
SNRPA-204ENST00000598452 ARHGEF10O15013 1369 aa27.57■■■□□ 2
SNRPA-204ENST00000598452 GLI3P10071 1580 aa27.55■■■□□ 2
SNRPA-204ENST00000598452 TNKS1BP1Q9C0C2 1729 aaKnown RBP27.55■■■□□ 2
SNRPA-204ENST00000598452 TULP4Q9NRJ4 1543 aa27.54■■■□□ 2
SNRPA-204ENST00000598452 EIF3AQ14152 1382 aaKnown RBP27.53■■■□□ 2
SNRPA-204ENST00000598452 GPRASP1Q5JY77 1395 aa27.52■■■□□ 2
SNRPA-204ENST00000598452 FAM83GA6ND36 823 aa27.51■■□□□ 1.99
SNRPA-204ENST00000598452 VPS72Q15906 364 aa27.5■■□□□ 1.99
SNRPA-204ENST00000598452 NGDNQ8NEJ9 315 aaKnown RBP27.5■■□□□ 1.99
SNRPA-204ENST00000598452 ABCA3Q99758 1704 aa27.5■■□□□ 1.99
SNRPA-204ENST00000598452 CCDC9Q9Y3X0 531 aaKnown RBP27.49■■□□□ 1.99
SNRPA-204ENST00000598452 TRPM3Q9HCF6 1732 aaPredicted RBP27.49■■□□□ 1.99
SNRPA-204ENST00000598452 ARHGEF28Q8N1W1 1705 aaKnown RBP27.47■■□□□ 1.99
SNRPA-204ENST00000598452 SEPT12Q8IYM1 358 aa27.47■■□□□ 1.99
SNRPA-204ENST00000598452 NUDT16Q96DE0 195 aaKnown RBP27.47■■□□□ 1.99
SNRPA-204ENST00000598452 PLCH1Q4KWH8 1693 aa27.46■■□□□ 1.99
SNRPA-204ENST00000598452 PAK3O75914 559 aaPredicted RBP27.46■■□□□ 1.99
SNRPA-204ENST00000598452 EP400Q96L91 3159 aa27.45■■□□□ 1.98
SNRPA-204ENST00000598452 NBPF1Q3BBV0 1214 aa27.44■■□□□ 1.98
SNRPA-204ENST00000598452 CDK19Q9BWU1 502 aa27.44■■□□□ 1.98
SNRPA-204ENST00000598452 ATP7BP35670 1465 aa27.44■■□□□ 1.98
SNRPA-204ENST00000598452 ALS2Q96Q42 1657 aa27.43■■□□□ 1.98
SNRPA-204ENST00000598452 CCDC125Q86Z20 511 aa27.43■■□□□ 1.98
SNRPA-204ENST00000598452 BTG4Q9NY30 223 aa27.43■■□□□ 1.98
SNRPA-204ENST00000598452 NWD2Q9ULI1 1742 aa27.41■■□□□ 1.98
SNRPA-204ENST00000598452 ONECUT3O60422 494 aaPredicted RBP27.4■■□□□ 1.98
SNRPA-204ENST00000598452 BRWD3Q6RI45 1802 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms