RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 IQSEC2Q5JU85 1478 aa31.22■■■□□ 2.59
CHMP2A-204ENST00000597848 XIRP1Q702N8 1843 aaKnown RBP31.22■■■□□ 2.59
CHMP2A-204ENST00000597848 ARHGEF28Q8N1W1 1705 aaKnown RBP31.22■■■□□ 2.59
CHMP2A-204ENST00000597848 ATF3P18847 181 aa31.22■■■□□ 2.59
CHMP2A-204ENST00000597848 HIRIP3Q9BW71 556 aaPredicted RBP31.21■■■□□ 2.59
CHMP2A-204ENST00000597848 USP47Q96K76 1375 aa31.18■■■□□ 2.58
CHMP2A-204ENST00000597848 UBAP1LF5GYI3 381 aa31.17■■■□□ 2.58
CHMP2A-204ENST00000597848 CADPS2Q86UW7 1296 aa31.17■■■□□ 2.58
CHMP2A-204ENST00000597848 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.16■■■□□ 2.58
CHMP2A-204ENST00000597848 TOM1O60784 492 aa31.16■■■□□ 2.58
CHMP2A-204ENST00000597848 ST20-MTHFSA0A0A6YYL1 179 aa31.15■■■□□ 2.58
CHMP2A-204ENST00000597848 NALCNQ8IZF0 1738 aa31.14■■■□□ 2.58
CHMP2A-204ENST00000597848 EIF4G2P78344 907 aaKnown RBP eCLIP31.12■■■□□ 2.57
CHMP2A-204ENST00000597848 DCCP43146 1447 aa31.12■■■□□ 2.57
CHMP2A-204ENST00000597848 SLAIN2Q9P270 581 aa31.1■■■□□ 2.57
CHMP2A-204ENST00000597848 NUTM2FA1L443 756 aa31.09■■■□□ 2.57
CHMP2A-204ENST00000597848 WASLO00401 505 aaPredicted RBP31.09■■■□□ 2.57
CHMP2A-204ENST00000597848 QRICH2Q9H0J4 1663 aa31.07■■■□□ 2.56
CHMP2A-204ENST00000597848 SCAF1Q9H7N4 1312 aaKnown RBP31.07■■■□□ 2.56
CHMP2A-204ENST00000597848 HSPA5P11021 654 aaKnown RBP31.07■■■□□ 2.56
CHMP2A-204ENST00000597848 PIP4K2BP78356 416 aa31.07■■■□□ 2.56
CHMP2A-204ENST00000597848 CDK19Q9BWU1 502 aa31.07■■■□□ 2.56
CHMP2A-204ENST00000597848 CDC42BPGQ6DT37 1551 aa31.05■■■□□ 2.56
CHMP2A-204ENST00000597848 EVC2Q86UK5 1308 aa31.04■■■□□ 2.56
CHMP2A-204ENST00000597848 SRPK2P78362 688 aaKnown RBP31.03■■■□□ 2.56
CHMP2A-204ENST00000597848 ADGRB2O60241 1585 aa31.03■■■□□ 2.56
CHMP2A-204ENST00000597848 TESK2Q96S53 571 aa31.02■■■□□ 2.56
CHMP2A-204ENST00000597848 SBNO2Q9Y2G9 1366 aa31.02■■■□□ 2.56
CHMP2A-204ENST00000597848 MST1RQ04912 1400 aa31.01■■■□□ 2.55
CHMP2A-204ENST00000597848 SLC24A1O60721 1099 aa31.01■■■□□ 2.55
CHMP2A-204ENST00000597848 CABP2Q9NPB3 220 aa30.99■■■□□ 2.55
CHMP2A-204ENST00000597848 C1orf167Q5SNV9 1468 aa30.98■■■□□ 2.55
CHMP2A-204ENST00000597848 ESCO1Q5FWF5 840 aa30.97■■■□□ 2.55
CHMP2A-204ENST00000597848 TMF1P82094 1093 aa30.96■■■□□ 2.55
CHMP2A-204ENST00000597848 FMN2Q9NZ56 1722 aa30.95■■■□□ 2.55
CHMP2A-204ENST00000597848 NUDT16Q96DE0 195 aaKnown RBP30.95■■■□□ 2.55
CHMP2A-204ENST00000597848 ORAI2Q96SN7 254 aa30.95■■■□□ 2.55
CHMP2A-204ENST00000597848 TULP4Q9NRJ4 1543 aa30.94■■■□□ 2.54
CHMP2A-204ENST00000597848 FBXO41Q8TF61 875 aa30.94■■■□□ 2.54
CHMP2A-204ENST00000597848 PRR36Q9H6K5 1346 aa30.94■■■□□ 2.54
CHMP2A-204ENST00000597848 ANKARQ7Z5J8 1434 aa30.92■■■□□ 2.54
CHMP2A-204ENST00000597848 BRINP3Q76B58 766 aa30.92■■■□□ 2.54
CHMP2A-204ENST00000597848 CCDC61Q9Y6R9 512 aa30.89■■■□□ 2.54
CHMP2A-204ENST00000597848 PHF8Q9UPP1 1060 aa30.88■■■□□ 2.53
CHMP2A-204ENST00000597848 CDCA8Q53HL2 280 aa30.87■■■□□ 2.53
CHMP2A-204ENST00000597848 DISP3Q9P2K9 1392 aa30.87■■■□□ 2.53
CHMP2A-204ENST00000597848 PMFBP1Q8TBY8 1022 aa30.86■■■□□ 2.53
CHMP2A-204ENST00000597848 ATP7BP35670 1465 aa30.85■■■□□ 2.53
CHMP2A-204ENST00000597848 ROBO1Q9Y6N7 1651 aa30.84■■■□□ 2.53
CHMP2A-204ENST00000597848 USP32Q8NFA0 1604 aa30.84■■■□□ 2.53
CHMP2A-204ENST00000597848 ATAD2Q6PL18 1390 aa30.83■■■□□ 2.53
CHMP2A-204ENST00000597848 PUS7Q96PZ0 661 aaKnown RBP30.83■■■□□ 2.53
CHMP2A-204ENST00000597848 POLR3GLQ9BT43 218 aa30.83■■■□□ 2.53
CHMP2A-204ENST00000597848 RGPD8O14715 1765 aaPredicted RBP30.82■■■□□ 2.52
CHMP2A-204ENST00000597848 FOXO3O43524 673 aa30.81■■■□□ 2.52
CHMP2A-204ENST00000597848 TMC1Q8TDI8 760 aa30.81■■■□□ 2.52
CHMP2A-204ENST00000597848 CABP1Q9NZU7 370 aa30.81■■■□□ 2.52
CHMP2A-204ENST00000597848 NGDNQ8NEJ9 315 aaKnown RBP30.8■■■□□ 2.52
CHMP2A-204ENST00000597848 DDX17Q92841 729 aaKnown RBP30.8■■■□□ 2.52
CHMP2A-204ENST00000597848 PPIP5K1Q6PFW1 1433 aa30.8■■■□□ 2.52
CHMP2A-204ENST00000597848 PLEKHG3A1L390 1219 aa30.78■■■□□ 2.52
CHMP2A-204ENST00000597848 NPHP3Q7Z494 1330 aa30.75■■■□□ 2.51
CHMP2A-204ENST00000597848 C11orf95C9JLR9 678 aaPredicted RBP30.75■■■□□ 2.51
CHMP2A-204ENST00000597848 PSME1Q06323 249 aa30.75■■■□□ 2.51
CHMP2A-204ENST00000597848 HSPA1LP34931 641 aa30.74■■■□□ 2.51
CHMP2A-204ENST00000597848 XPCQ01831 940 aaPredicted RBP30.74■■■□□ 2.51
CHMP2A-204ENST00000597848 SLC12A5Q9H2X9 1139 aa30.74■■■□□ 2.51
CHMP2A-204ENST00000597848 ACEP12821 1306 aa30.73■■■□□ 2.51
CHMP2A-204ENST00000597848 ITSN1Q15811 1721 aa30.73■■■□□ 2.51
CHMP2A-204ENST00000597848 KIF1AQ12756 1690 aa30.72■■■□□ 2.51
CHMP2A-204ENST00000597848 KRT28Q7Z3Y7 464 aa30.72■■■□□ 2.51
CHMP2A-204ENST00000597848 TOPAZ1Q8N9V7 1692 aa30.7■■■□□ 2.5
CHMP2A-204ENST00000597848 KIF7Q2M1P5 1343 aa30.68■■■□□ 2.5
CHMP2A-204ENST00000597848 POLR3AO14802 1390 aaPredicted RBP30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 AHDC1Q5TGY3 1603 aaPredicted RBP30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 HDGFL2Q7Z4V5 671 aaPredicted RBP30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 ILDR1Q86SU0 546 aaPredicted RBP30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 TERF2IPQ9NYB0 399 aa30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 SOS2Q07890 1332 aaPredicted RBP30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 NINLQ9Y2I6 1382 aa30.66■■■□□ 2.5
CHMP2A-204ENST00000597848 ZNF692Q9BU19 519 aaPredicted RBP30.65■■■□□ 2.5
CHMP2A-204ENST00000597848 PHLPP1O60346 1717 aa30.64■■■□□ 2.5
CHMP2A-204ENST00000597848 NHSL1Q5SYE7 1610 aa30.64■■■□□ 2.5
CHMP2A-204ENST00000597848 LRRC59Q96AG4 307 aaKnown RBP30.63■■■□□ 2.49
CHMP2A-204ENST00000597848 PAK3O75914 559 aaPredicted RBP30.62■■■□□ 2.49
CHMP2A-204ENST00000597848 CCDC7Q96M83 1385 aa30.61■■■□□ 2.49
CHMP2A-204ENST00000597848 PXDNQ92626 1479 aa30.61■■■□□ 2.49
CHMP2A-204ENST00000597848 WASHC2AQ641Q2 1341 aa30.6■■■□□ 2.49
CHMP2A-204ENST00000597848 LMOD2Q6P5Q4 547 aa30.6■■■□□ 2.49
CHMP2A-204ENST00000597848 KTN1Q86UP2 1357 aaKnown RBP30.59■■■□□ 2.49
CHMP2A-204ENST00000597848 CPSF1Q10570 1443 aaKnown RBP30.58■■■□□ 2.49
CHMP2A-204ENST00000597848 SBNO1A3KN83 1393 aa30.56■■■□□ 2.48
CHMP2A-204ENST00000597848 CD163L1Q9NR16 1453 aa30.56■■■□□ 2.48
CHMP2A-204ENST00000597848 USP6P35125 1406 aa30.56■■■□□ 2.48
CHMP2A-204ENST00000597848 A0A1W2PP64 1363 aa30.55■■■□□ 2.48
CHMP2A-204ENST00000597848 ANKRD36BQ8N2N9 1353 aa30.55■■■□□ 2.48
CHMP2A-204ENST00000597848 COL16A1Q07092 1604 aaPredicted RBP30.55■■■□□ 2.48
CHMP2A-204ENST00000597848 SPATA31A3Q5VYP0 1347 aa30.55■■■□□ 2.48
CHMP2A-204ENST00000597848 PANK3Q9H999 370 aa30.52■■■□□ 2.48
CHMP2A-204ENST00000597848 BRD4O60885 1362 aaPredicted RBP30.52■■■□□ 2.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms