RNA–Protein interactions for RNA: ENST00000597777.1

FARP1-222, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

Gene FARP1, Length 3,841 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-222	ENST00000597777	CDCA8	Q53HL2	280 aa		13.13	□□□□□ -0.31
FARP1-222	ENST00000597777	LRPPRC	P42704	1394 aa	Known RBP	13.12	□□□□□ -0.31
FARP1-222	ENST00000597777	RTL5	Q5HYW3	569 aa	Predicted RBP	13.12	□□□□□ -0.31
FARP1-222	ENST00000597777	TECPR2	O15040	1411 aa		13.12	□□□□□ -0.31
FARP1-222	ENST00000597777	CPS1	P31327	1500 aa		13.12	□□□□□ -0.31
FARP1-222	ENST00000597777	ADAMTS13	Q76LX8	1427 aa		13.12	□□□□□ -0.31
FARP1-222	ENST00000597777	CENPJ	Q9HC77	1338 aa	Predicted RBP	13.12	□□□□□ -0.31
FARP1-222	ENST00000597777	DISP3	Q9P2K9	1392 aa		13.11	□□□□□ -0.31
FARP1-222	ENST00000597777	ABCC11	Q96J66	1382 aa		13.11	□□□□□ -0.31
FARP1-222	ENST00000597777	CCDC184	Q52MB2	194 aa		13.1	□□□□□ -0.31
FARP1-222	ENST00000597777	TMEM132E	Q6IEE7	984 aa		13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	TXNDC2	Q86VQ3	553 aa		13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	LTK	P29376	864 aa		13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	MYOM1	P52179	1685 aa		13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	SIRT1	Q96EB6	747 aa		13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	FAM135B	Q49AJ0	1406 aa		13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	PUS7	Q96PZ0	661 aa	Known RBP	13.09	□□□□□ -0.31
FARP1-222	ENST00000597777	RBM19	Q9Y4C8	960 aa	Known RBP	13.08	□□□□□ -0.32
FARP1-222	ENST00000597777	TRAK1	Q9UPV9	953 aa		13.08	□□□□□ -0.32
FARP1-222	ENST00000597777	PIK3R4	Q99570	1358 aa		13.07	□□□□□ -0.32
FARP1-222	ENST00000597777	MET	P08581	1390 aa		13.07	□□□□□ -0.32
FARP1-222	ENST00000597777	TBX22	Q9Y458	520 aa		13.06	□□□□□ -0.32
FARP1-222	ENST00000597777	XRN1	Q8IZH2	1706 aa	Known RBP	13.06	□□□□□ -0.32
FARP1-222	ENST00000597777	TULP4	Q9NRJ4	1543 aa		13.06	□□□□□ -0.32
FARP1-222	ENST00000597777	ANKLE2	Q86XL3	938 aa		13.05	□□□□□ -0.32
FARP1-222	ENST00000597777	ADGRB2	O60241	1585 aa		13.04	□□□□□ -0.32
FARP1-222	ENST00000597777	PTCH1	Q13635	1447 aa		13.04	□□□□□ -0.32
FARP1-222	ENST00000597777	PPM1G	O15355	546 aa	Predicted RBP	13.03	□□□□□ -0.32
FARP1-222	ENST00000597777	EVC2	Q86UK5	1308 aa		13.03	□□□□□ -0.32
FARP1-222	ENST00000597777	LAS1L	Q9Y4W2	734 aa	Known RBP	13.02	□□□□□ -0.33
FARP1-222	ENST00000597777	KTN1	Q86UP2	1357 aa	Known RBP	13.02	□□□□□ -0.33
FARP1-222	ENST00000597777	NINL	Q9Y2I6	1382 aa		13.02	□□□□□ -0.33
FARP1-222	ENST00000597777	KDM4F	A0A1W2PPD8	638 aa		13.02	□□□□□ -0.33
FARP1-222	ENST00000597777	EIF5B	O60841	1220 aa	Known RBP	13.02	□□□□□ -0.33
FARP1-222	ENST00000597777	ANP32A	P39687	249 aa	Known RBP	13.02	□□□□□ -0.33
FARP1-222	ENST00000597777	CHD2	O14647	1828 aa	Known RBP	13.01	□□□□□ -0.33
FARP1-222	ENST00000597777	PRAM1	Q96QH2	718 aa		13.01	□□□□□ -0.33
FARP1-222	ENST00000597777	STK26	Q9P289	416 aa		13.01	□□□□□ -0.33
FARP1-222	ENST00000597777	NPHP4	O75161	1426 aa	Predicted RBP	13.01	□□□□□ -0.33
FARP1-222	ENST00000597777	PTPRU	Q92729	1446 aa		13	□□□□□ -0.33
FARP1-222	ENST00000597777	CCER2	I3L3R5	266 aa		13	□□□□□ -0.33
FARP1-222	ENST00000597777	RGS3	P49796	1198 aa		13	□□□□□ -0.33
FARP1-222	ENST00000597777	POGK	Q9P215	609 aa		13	□□□□□ -0.33
FARP1-222	ENST00000597777	NWD1	Q149M9	1564 aa		12.99	□□□□□ -0.33
FARP1-222	ENST00000597777	RTN4	Q9NQC3	1192 aa	Known RBP	12.99	□□□□□ -0.33
FARP1-222	ENST00000597777	USP32	Q8NFA0	1604 aa		12.99	□□□□□ -0.33
FARP1-222	ENST00000597777	PLIN1	O60240	522 aa		12.99	□□□□□ -0.33
FARP1-222	ENST00000597777	ATAD2	Q6PL18	1390 aa		12.98	□□□□□ -0.33
FARP1-222	ENST00000597777	WDR43	Q15061	677 aa	Known RBP eCLIP	12.98	□□□□□ -0.33
FARP1-222	ENST00000597777	ROBO2	Q9HCK4	1378 aa		12.97	□□□□□ -0.33
FARP1-222	ENST00000597777	LMTK3	Q96Q04	1460 aa		12.97	□□□□□ -0.33
FARP1-222	ENST00000597777	PER1	O15534	1290 aa	Predicted RBP	12.96	□□□□□ -0.33
FARP1-222	ENST00000597777	NPC1L1	Q9UHC9	1359 aa		12.96	□□□□□ -0.33
FARP1-222	ENST00000597777	PLEKHH1	Q9ULM0	1364 aa		12.96	□□□□□ -0.33
FARP1-222	ENST00000597777	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	12.96	□□□□□ -0.33
FARP1-222	ENST00000597777	SOX12	O15370	315 aa		12.96	□□□□□ -0.33
FARP1-222	ENST00000597777	SLC26A8	Q96RN1	970 aa		12.96	□□□□□ -0.34
FARP1-222	ENST00000597777	PRKRIP1	Q9H875	184 aa	Predicted RBP	12.96	□□□□□ -0.34
FARP1-222	ENST00000597777	PANK3	Q9H999	370 aa		12.95	□□□□□ -0.34
FARP1-222	ENST00000597777	FRAT1	Q92837	279 aa	Predicted RBP	12.94	□□□□□ -0.34
FARP1-222	ENST00000597777	AMOTL2	Q9Y2J4	779 aa		12.94	□□□□□ -0.34
FARP1-222	ENST00000597777	CCDC146	Q8IYE0	955 aa		12.94	□□□□□ -0.34
FARP1-222	ENST00000597777	TOPAZ1	Q8N9V7	1692 aa		12.94	□□□□□ -0.34
FARP1-222	ENST00000597777	MINK1	Q8N4C8	1332 aa	Predicted RBP	12.93	□□□□□ -0.34
FARP1-222	ENST00000597777	MSH5	O43196	834 aa		12.93	□□□□□ -0.34
FARP1-222	ENST00000597777	RALBP1	Q15311	655 aa		12.93	□□□□□ -0.34
FARP1-222	ENST00000597777	WAPL	Q7Z5K2	1190 aa		12.93	□□□□□ -0.34
FARP1-222	ENST00000597777	ANKRD36B	Q8N2N9	1353 aa		12.93	□□□□□ -0.34
FARP1-222	ENST00000597777	ATP7B	P35670	1465 aa		12.93	□□□□□ -0.34
FARP1-222	ENST00000597777	PARD3	Q8TEW0	1356 aa		12.92	□□□□□ -0.34
FARP1-222	ENST00000597777	NKTR	P30414	1462 aa	Known RBP	12.92	□□□□□ -0.34
FARP1-222	ENST00000597777	ZBTB47	Q9UFB7	747 aa	Predicted RBP	12.92	□□□□□ -0.34
FARP1-222	ENST00000597777	ITSN1	Q15811	1721 aa		12.92	□□□□□ -0.34
FARP1-222	ENST00000597777	WASL	O00401	505 aa	Predicted RBP	12.91	□□□□□ -0.34
FARP1-222	ENST00000597777	CDK19	Q9BWU1	502 aa		12.91	□□□□□ -0.34
FARP1-222	ENST00000597777	SKAP1	Q86WV1	359 aa		12.91	□□□□□ -0.34
FARP1-222	ENST00000597777	CDC42BPG	Q6DT37	1551 aa		12.91	□□□□□ -0.34
FARP1-222	ENST00000597777	STRC	Q7RTU9	1775 aa		12.91	□□□□□ -0.34
FARP1-222	ENST00000597777	SRPK2	P78362	688 aa	Known RBP	12.9	□□□□□ -0.34
FARP1-222	ENST00000597777	NCKAP5L	Q9HCH0	1330 aa		12.9	□□□□□ -0.34
FARP1-222	ENST00000597777	KNSTRN	Q9Y448	316 aa		12.9	□□□□□ -0.34
FARP1-222	ENST00000597777	CABP2	Q9NPB3	220 aa		12.9	□□□□□ -0.34
FARP1-222	ENST00000597777	NALCN	Q8IZF0	1738 aa		12.89	□□□□□ -0.35
FARP1-222	ENST00000597777	FMN2	Q9NZ56	1722 aa		12.89	□□□□□ -0.35
FARP1-222	ENST00000597777	CD163L1	Q9NR16	1453 aa		12.89	□□□□□ -0.35
FARP1-222	ENST00000597777	KCNA6	P17658	529 aa		12.89	□□□□□ -0.35
FARP1-222	ENST00000597777	AKAP12	Q02952	1782 aa		12.89	□□□□□ -0.35
FARP1-222	ENST00000597777	PPP4R2	Q9NY27	417 aa		12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	NSD2	O96028	1365 aa		12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	AMER1	Q5JTC6	1135 aa	Predicted RBP	12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	ANKAR	Q7Z5J8	1434 aa		12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	ANKRD26	Q9UPS8	1709 aa		12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	MON2	Q7Z3U7	1717 aa		12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.88	□□□□□ -0.35
FARP1-222	ENST00000597777	ZBTB7C	A1YPR0	619 aa		12.87	□□□□□ -0.35
FARP1-222	ENST00000597777	TERF2IP	Q9NYB0	399 aa		12.87	□□□□□ -0.35
FARP1-222	ENST00000597777	NSD3	Q9BZ95	1437 aa		12.87	□□□□□ -0.35
FARP1-222	ENST00000597777	SLC4A3	P48751	1232 aa		12.86	□□□□□ -0.35
FARP1-222	ENST00000597777	SLC12A5	Q9H2X9	1139 aa		12.86	□□□□□ -0.35
FARP1-222	ENST00000597777	RRP7A	Q9Y3A4	280 aa	Known RBP	12.86	□□□□□ -0.35

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