RNA–Protein interactions for RNA: ENST00000597297.1

PDE4C-210, Transcript of phosphodiesterase 4C, humanhuman

TSL 1 (best) BASIC

Gene PDE4C, Length 1,559 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4C-210ENST00000597297 POLR3GLQ9BT43 218 aa16.27■□□□□ 0.2
PDE4C-210ENST00000597297 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
PDE4C-210ENST00000597297 C19orf44Q9H6X5 657 aa16.26■□□□□ 0.19
PDE4C-210ENST00000597297 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
PDE4C-210ENST00000597297 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
PDE4C-210ENST00000597297 NCOA3Q9Y6Q9 1424 aa16.25■□□□□ 0.19
PDE4C-210ENST00000597297 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
PDE4C-210ENST00000597297 MSH6P52701 1360 aa16.24■□□□□ 0.19
PDE4C-210ENST00000597297 ASXL1Q8IXJ9 1541 aa16.24■□□□□ 0.19
PDE4C-210ENST00000597297 LRPPRCP42704 1394 aaKnown RBP16.24■□□□□ 0.19
PDE4C-210ENST00000597297 DISP3Q9P2K9 1392 aa16.24■□□□□ 0.19
PDE4C-210ENST00000597297 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
PDE4C-210ENST00000597297 SLAIN2Q9P270 581 aa16.23■□□□□ 0.19
PDE4C-210ENST00000597297 ABCC11Q96J66 1382 aa16.23■□□□□ 0.19
PDE4C-210ENST00000597297 YTHDC2Q9H6S0 1430 aaKnown RBP16.22■□□□□ 0.19
PDE4C-210ENST00000597297 TMF1P82094 1093 aa16.22■□□□□ 0.19
PDE4C-210ENST00000597297 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.21■□□□□ 0.19
PDE4C-210ENST00000597297 ATF3P18847 181 aa16.21■□□□□ 0.18
PDE4C-210ENST00000597297 CADPS2Q86UW7 1296 aa16.2■□□□□ 0.18
PDE4C-210ENST00000597297 PRKRIP1Q9H875 184 aaPredicted RBP16.2■□□□□ 0.18
PDE4C-210ENST00000597297 PTCH1Q13635 1447 aa16.2■□□□□ 0.18
PDE4C-210ENST00000597297 PLEKHH1Q9ULM0 1364 aa16.19■□□□□ 0.18
PDE4C-210ENST00000597297 SIRT1Q96EB6 747 aa16.19■□□□□ 0.18
PDE4C-210ENST00000597297 TRAK1Q9UPV9 953 aa16.19■□□□□ 0.18
PDE4C-210ENST00000597297 HSPA1LP34931 641 aa16.18■□□□□ 0.18
PDE4C-210ENST00000597297 TECPR2O15040 1411 aa16.18■□□□□ 0.18
PDE4C-210ENST00000597297 QRICH2Q9H0J4 1663 aa16.17■□□□□ 0.18
PDE4C-210ENST00000597297 ARHGEF28Q8N1W1 1705 aaKnown RBP16.17■□□□□ 0.18
PDE4C-210ENST00000597297 FAM135BQ49AJ0 1406 aa16.16■□□□□ 0.18
PDE4C-210ENST00000597297 ADGRL3Q9HAR2 1447 aa16.16■□□□□ 0.18
PDE4C-210ENST00000597297 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
PDE4C-210ENST00000597297 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
PDE4C-210ENST00000597297 MYOM1P52179 1685 aa16.15■□□□□ 0.18
PDE4C-210ENST00000597297 SBNO2Q9Y2G9 1366 aa16.15■□□□□ 0.18
PDE4C-210ENST00000597297 NALCNQ8IZF0 1738 aa16.14■□□□□ 0.17
PDE4C-210ENST00000597297 SLC24A1O60721 1099 aa16.14■□□□□ 0.17
PDE4C-210ENST00000597297 CDCA8Q53HL2 280 aa16.14■□□□□ 0.17
PDE4C-210ENST00000597297 KNDC1Q76NI1 1749 aa16.14■□□□□ 0.17
PDE4C-210ENST00000597297 POGKQ9P215 609 aa16.13■□□□□ 0.17
PDE4C-210ENST00000597297 DCCP43146 1447 aa16.12■□□□□ 0.17
PDE4C-210ENST00000597297 CENPJQ9HC77 1338 aaPredicted RBP16.12■□□□□ 0.17
PDE4C-210ENST00000597297 NUTM2FA1L443 756 aa16.11■□□□□ 0.17
PDE4C-210ENST00000597297 BRINP3Q76B58 766 aa16.11■□□□□ 0.17
PDE4C-210ENST00000597297 MST1RQ04912 1400 aa16.11■□□□□ 0.17
PDE4C-210ENST00000597297 ROBO1Q9Y6N7 1651 aa16.11■□□□□ 0.17
PDE4C-210ENST00000597297 KTN1Q86UP2 1357 aaKnown RBP16.1■□□□□ 0.17
PDE4C-210ENST00000597297 ORAI2Q96SN7 254 aa16.1■□□□□ 0.17
PDE4C-210ENST00000597297 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
PDE4C-210ENST00000597297 MINK1Q8N4C8 1332 aaPredicted RBP16.08■□□□□ 0.16
PDE4C-210ENST00000597297 C1orf167Q5SNV9 1468 aa16.07■□□□□ 0.16
PDE4C-210ENST00000597297 PER1O15534 1290 aaPredicted RBP16.07■□□□□ 0.16
PDE4C-210ENST00000597297 DDX17Q92841 729 aaKnown RBP16.07■□□□□ 0.16
PDE4C-210ENST00000597297 PANK3Q9H999 370 aa16.07■□□□□ 0.16
PDE4C-210ENST00000597297 CCDC184Q52MB2 194 aa16.06■□□□□ 0.16
PDE4C-210ENST00000597297 MRS2Q9HD23 443 aa16.06■□□□□ 0.16
PDE4C-210ENST00000597297 RALBP1Q15311 655 aa16.05■□□□□ 0.16
PDE4C-210ENST00000597297 ESCO1Q5FWF5 840 aa16.05■□□□□ 0.16
PDE4C-210ENST00000597297 CNGB1Q14028 1251 aaPredicted RBP16.04■□□□□ 0.16
PDE4C-210ENST00000597297 PARD3Q8TEW0 1356 aa16.04■□□□□ 0.16
PDE4C-210ENST00000597297 CDC42BPGQ6DT37 1551 aa16.03■□□□□ 0.16
PDE4C-210ENST00000597297 TULP4Q9NRJ4 1543 aa16.03■□□□□ 0.16
PDE4C-210ENST00000597297 MYBBP1AQ9BQG0 1328 aaKnown RBP16.02■□□□□ 0.16
PDE4C-210ENST00000597297 WASLO00401 505 aaPredicted RBP16.02■□□□□ 0.16
PDE4C-210ENST00000597297 RGPD8O14715 1765 aaPredicted RBP16.01■□□□□ 0.15
PDE4C-210ENST00000597297 PHLPP1O60346 1717 aa16.01■□□□□ 0.15
PDE4C-210ENST00000597297 FMN2Q9NZ56 1722 aa16■□□□□ 0.15
PDE4C-210ENST00000597297 FOXO3O43524 673 aa16■□□□□ 0.15
PDE4C-210ENST00000597297 CDK19Q9BWU1 502 aa16■□□□□ 0.15
PDE4C-210ENST00000597297 BRD4O60885 1362 aaPredicted RBP15.99■□□□□ 0.15
PDE4C-210ENST00000597297 EVC2Q86UK5 1308 aa15.98■□□□□ 0.15
PDE4C-210ENST00000597297 PUS7Q96PZ0 661 aaKnown RBP15.98■□□□□ 0.15
PDE4C-210ENST00000597297 KNSTRNQ9Y448 316 aa15.98■□□□□ 0.15
PDE4C-210ENST00000597297 PRR36Q9H6K5 1346 aa15.98■□□□□ 0.15
PDE4C-210ENST00000597297 AHDC1Q5TGY3 1603 aaPredicted RBP15.97■□□□□ 0.15
PDE4C-210ENST00000597297 ADGRB2O60241 1585 aa15.96■□□□□ 0.15
PDE4C-210ENST00000597297 XPCQ01831 940 aaPredicted RBP15.96■□□□□ 0.15
PDE4C-210ENST00000597297 FAM9BQ8IZU0 186 aa15.96■□□□□ 0.15
PDE4C-210ENST00000597297 PMFBP1Q8TBY8 1022 aa15.96■□□□□ 0.15
PDE4C-210ENST00000597297 PHF8Q9UPP1 1060 aa15.96■□□□□ 0.15
PDE4C-210ENST00000597297 COL16A1Q07092 1604 aaPredicted RBP15.96■□□□□ 0.15
PDE4C-210ENST00000597297 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.15
PDE4C-210ENST00000597297 CC2D1BQ5T0F9 858 aaKnown RBP15.96■□□□□ 0.14
PDE4C-210ENST00000597297 LRRC59Q96AG4 307 aaKnown RBP15.96■□□□□ 0.14
PDE4C-210ENST00000597297 NUDT16Q96DE0 195 aaKnown RBP15.96■□□□□ 0.14
PDE4C-210ENST00000597297 SOS2Q07890 1332 aaPredicted RBP15.95■□□□□ 0.14
PDE4C-210ENST00000597297 NHSL1Q5SYE7 1610 aa15.95■□□□□ 0.14
PDE4C-210ENST00000597297 USP32Q8NFA0 1604 aa15.95■□□□□ 0.14
PDE4C-210ENST00000597297 HNRNPUQ00839 825 aaKnown RBP eCLIP15.95■□□□□ 0.14
PDE4C-210ENST00000597297 AMER1Q5JTC6 1135 aaPredicted RBP15.95■□□□□ 0.14
PDE4C-210ENST00000597297 NLRP13Q86W25 1043 aa15.94■□□□□ 0.14
PDE4C-210ENST00000597297 TMC1Q8TDI8 760 aa15.94■□□□□ 0.14
PDE4C-210ENST00000597297 JCADQ9P266 1359 aa15.94■□□□□ 0.14
PDE4C-210ENST00000597297 CABP2Q9NPB3 220 aa15.93■□□□□ 0.14
PDE4C-210ENST00000597297 GTF3C3Q9Y5Q9 886 aa15.93■□□□□ 0.14
PDE4C-210ENST00000597297 NPHP3Q7Z494 1330 aa15.93■□□□□ 0.14
PDE4C-210ENST00000597297 ANKARQ7Z5J8 1434 aa15.93■□□□□ 0.14
PDE4C-210ENST00000597297 KRT28Q7Z3Y7 464 aa15.92■□□□□ 0.14
PDE4C-210ENST00000597297 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
PDE4C-210ENST00000597297 PSME1Q06323 249 aa15.91■□□□□ 0.14
PDE4C-210ENST00000597297 PNISRQ8TF01 805 aaKnown RBP15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms