RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 POGKQ9P215 609 aa15.05■□□□□ -0
LIG1-210ENST00000596332 DCCP43146 1447 aa15.05■□□□□ -0
LIG1-210ENST00000596332 MST1RQ04912 1400 aa15.04■□□□□ -0
LIG1-210ENST00000596332 MSH6P52701 1360 aa15.04■□□□□ -0
LIG1-210ENST00000596332 CENPJQ9HC77 1338 aaPredicted RBP15.04■□□□□ -0
LIG1-210ENST00000596332 HIRIP3Q9BW71 556 aaPredicted RBP15.04■□□□□ -0
LIG1-210ENST00000596332 ADGRB2O60241 1585 aa15.03■□□□□ -0
LIG1-210ENST00000596332 MINK1Q8N4C8 1332 aaPredicted RBP15.03■□□□□ -0
LIG1-210ENST00000596332 ST20-MTHFSA0A0A6YYL1 179 aa15.03■□□□□ -0
LIG1-210ENST00000596332 SLAIN2Q9P270 581 aa15.03■□□□□ -0
LIG1-210ENST00000596332 CDC42BPGQ6DT37 1551 aa15.02■□□□□ -0
LIG1-210ENST00000596332 PRR36Q9H6K5 1346 aa15.02■□□□□ -0
LIG1-210ENST00000596332 USP47Q96K76 1375 aa15.01□□□□□ -0.01
LIG1-210ENST00000596332 UBAP1LF5GYI3 381 aa15.01□□□□□ -0.01
LIG1-210ENST00000596332 WASLO00401 505 aaPredicted RBP15.01□□□□□ -0.01
LIG1-210ENST00000596332 CADPS2Q86UW7 1296 aa15.01□□□□□ -0.01
LIG1-210ENST00000596332 TULP4Q9NRJ4 1543 aa15.01□□□□□ -0.01
LIG1-210ENST00000596332 SBNO2Q9Y2G9 1366 aa15□□□□□ -0.01
LIG1-210ENST00000596332 USP32Q8NFA0 1604 aa15□□□□□ -0.01
LIG1-210ENST00000596332 C1orf167Q5SNV9 1468 aa15□□□□□ -0.01
LIG1-210ENST00000596332 TOM1O60784 492 aa14.99□□□□□ -0.01
LIG1-210ENST00000596332 ATF3P18847 181 aa14.99□□□□□ -0.01
LIG1-210ENST00000596332 C14orf37Q86TY3 774 aa14.99□□□□□ -0.01
LIG1-210ENST00000596332 FBXO41Q8TF61 875 aa14.99□□□□□ -0.01
LIG1-210ENST00000596332 ORAI2Q96SN7 254 aa14.99□□□□□ -0.01
LIG1-210ENST00000596332 CDK19Q9BWU1 502 aa14.99□□□□□ -0.01
LIG1-210ENST00000596332 FMN2Q9NZ56 1722 aa14.98□□□□□ -0.01
LIG1-210ENST00000596332 QRICH2Q9H0J4 1663 aa14.98□□□□□ -0.01
LIG1-210ENST00000596332 HSPA5P11021 654 aaKnown RBP14.98□□□□□ -0.01
LIG1-210ENST00000596332 NUTM2FA1L443 756 aa14.97□□□□□ -0.01
LIG1-210ENST00000596332 BRINP3Q76B58 766 aa14.97□□□□□ -0.01
LIG1-210ENST00000596332 EIF3AQ14152 1382 aaKnown RBP14.96□□□□□ -0.02
LIG1-210ENST00000596332 C11orf95C9JLR9 678 aaPredicted RBP14.95□□□□□ -0.02
LIG1-210ENST00000596332 CABP2Q9NPB3 220 aa14.95□□□□□ -0.02
LIG1-210ENST00000596332 ATP7BP35670 1465 aa14.95□□□□□ -0.02
LIG1-210ENST00000596332 PIP4K2BP78356 416 aa14.94□□□□□ -0.02
LIG1-210ENST00000596332 NUDT16Q96DE0 195 aaKnown RBP14.94□□□□□ -0.02
LIG1-210ENST00000596332 DISP3Q9P2K9 1392 aa14.94□□□□□ -0.02
LIG1-210ENST00000596332 ANKARQ7Z5J8 1434 aa14.93□□□□□ -0.02
LIG1-210ENST00000596332 EIF4G2P78344 907 aaKnown RBP eCLIP14.93□□□□□ -0.02
LIG1-210ENST00000596332 DDX17Q92841 729 aaKnown RBP14.93□□□□□ -0.02
LIG1-210ENST00000596332 ROBO1Q9Y6N7 1651 aa14.93□□□□□ -0.02
LIG1-210ENST00000596332 RGPD8O14715 1765 aaPredicted RBP14.93□□□□□ -0.02
LIG1-210ENST00000596332 ESCO1Q5FWF5 840 aa14.91□□□□□ -0.02
LIG1-210ENST00000596332 ILDR1Q86SU0 546 aaPredicted RBP14.91□□□□□ -0.02
LIG1-210ENST00000596332 PUS7Q96PZ0 661 aaKnown RBP14.91□□□□□ -0.02
LIG1-210ENST00000596332 EVC2Q86UK5 1308 aa14.91□□□□□ -0.02
LIG1-210ENST00000596332 PLEKHG3A1L390 1219 aa14.9□□□□□ -0.02
LIG1-210ENST00000596332 HSPA1LP34931 641 aa14.89□□□□□ -0.03
LIG1-210ENST00000596332 CCDC61Q9Y6R9 512 aa14.89□□□□□ -0.03
LIG1-210ENST00000596332 TOPAZ1Q8N9V7 1692 aa14.89□□□□□ -0.03
LIG1-210ENST00000596332 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
LIG1-210ENST00000596332 PMFBP1Q8TBY8 1022 aa14.88□□□□□ -0.03
LIG1-210ENST00000596332 CABP1Q9NZU7 370 aa14.88□□□□□ -0.03
LIG1-210ENST00000596332 PHF8Q9UPP1 1060 aa14.88□□□□□ -0.03
LIG1-210ENST00000596332 SOS2Q07890 1332 aaPredicted RBP14.88□□□□□ -0.03
LIG1-210ENST00000596332 FOXO3O43524 673 aa14.87□□□□□ -0.03
LIG1-210ENST00000596332 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
LIG1-210ENST00000596332 AHDC1Q5TGY3 1603 aaPredicted RBP14.87□□□□□ -0.03
LIG1-210ENST00000596332 CD163L1Q9NR16 1453 aa14.87□□□□□ -0.03
LIG1-210ENST00000596332 POLR3AO14802 1390 aaPredicted RBP14.86□□□□□ -0.03
LIG1-210ENST00000596332 NHSL1Q5SYE7 1610 aa14.86□□□□□ -0.03
LIG1-210ENST00000596332 PXDNQ92626 1479 aa14.86□□□□□ -0.03
LIG1-210ENST00000596332 SLC12A5Q9H2X9 1139 aa14.85□□□□□ -0.03
LIG1-210ENST00000596332 ACEP12821 1306 aa14.85□□□□□ -0.03
LIG1-210ENST00000596332 SCAF1Q9H7N4 1312 aaKnown RBP14.85□□□□□ -0.03
LIG1-210ENST00000596332 COL16A1Q07092 1604 aaPredicted RBP14.84□□□□□ -0.03
LIG1-210ENST00000596332 CPSF1Q10570 1443 aaKnown RBP14.84□□□□□ -0.03
LIG1-210ENST00000596332 PPIP5K1Q6PFW1 1433 aa14.84□□□□□ -0.03
LIG1-210ENST00000596332 TMF1P82094 1093 aa14.84□□□□□ -0.03
LIG1-210ENST00000596332 SSH2Q76I76 1423 aa14.83□□□□□ -0.03
LIG1-210ENST00000596332 SLC24A1O60721 1099 aa14.83□□□□□ -0.04
LIG1-210ENST00000596332 XPCQ01831 940 aaPredicted RBP14.83□□□□□ -0.04
LIG1-210ENST00000596332 KRT28Q7Z3Y7 464 aa14.82□□□□□ -0.04
LIG1-210ENST00000596332 ATAD2Q6PL18 1390 aa14.82□□□□□ -0.04
LIG1-210ENST00000596332 KIF1AQ12756 1690 aa14.81□□□□□ -0.04
LIG1-210ENST00000596332 KIF7Q2M1P5 1343 aa14.81□□□□□ -0.04
LIG1-210ENST00000596332 WASHC2AQ641Q2 1341 aa14.8□□□□□ -0.04
LIG1-210ENST00000596332 NPHP3Q7Z494 1330 aa14.8□□□□□ -0.04
LIG1-210ENST00000596332 MYOM1P52179 1685 aa14.79□□□□□ -0.04
LIG1-210ENST00000596332 SPATA31A3Q5VYP0 1347 aa14.79□□□□□ -0.04
LIG1-210ENST00000596332 TRPM3Q9HCF6 1732 aaPredicted RBP14.79□□□□□ -0.04
LIG1-210ENST00000596332 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
LIG1-210ENST00000596332 ITSN1Q15811 1721 aa14.78□□□□□ -0.04
LIG1-210ENST00000596332 NGDNQ8NEJ9 315 aaKnown RBP14.78□□□□□ -0.04
LIG1-210ENST00000596332 CARD14Q9BXL6 1004 aa14.78□□□□□ -0.04
LIG1-210ENST00000596332 USP6P35125 1406 aa14.77□□□□□ -0.04
LIG1-210ENST00000596332 SBNO1A3KN83 1393 aa14.77□□□□□ -0.04
LIG1-210ENST00000596332 A0A1W2PP64 1363 aa14.76□□□□□ -0.05
LIG1-210ENST00000596332 CCDC7Q96M83 1385 aa14.76□□□□□ -0.05
LIG1-210ENST00000596332 PSME1Q06323 249 aa14.76□□□□□ -0.05
LIG1-210ENST00000596332 LRRC59Q96AG4 307 aaKnown RBP14.76□□□□□ -0.05
LIG1-210ENST00000596332 PNPLA6Q8IY17 1366 aa14.75□□□□□ -0.05
LIG1-210ENST00000596332 CDCA8Q53HL2 280 aa14.75□□□□□ -0.05
LIG1-210ENST00000596332 TMC1Q8TDI8 760 aa14.75□□□□□ -0.05
LIG1-210ENST00000596332 ZNF692Q9BU19 519 aaPredicted RBP14.75□□□□□ -0.05
LIG1-210ENST00000596332 AKAP12Q02952 1782 aa14.75□□□□□ -0.05
LIG1-210ENST00000596332 NINLQ9Y2I6 1382 aa14.74□□□□□ -0.05
LIG1-210ENST00000596332 ALS2Q96Q42 1657 aa14.74□□□□□ -0.05
LIG1-210ENST00000596332 ANKRD36BQ8N2N9 1353 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 148.1 ms