RNA–Protein interactions for RNA: ENST00000595514.1

NOTCH3-203, Transcript of notch 3, humanhuman

TSL 3

Gene NOTCH3, Length 564 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-203ENST00000595514 ADGRL2O95490 1459 aa15.91■□□□□ 0.14
NOTCH3-203ENST00000595514 ZNF326Q5BKZ1 582 aaKnown RBP15.9■□□□□ 0.14
NOTCH3-203ENST00000595514 GLI3P10071 1580 aa15.9■□□□□ 0.14
NOTCH3-203ENST00000595514 SPHKAPQ2M3C7 1700 aa15.88■□□□□ 0.13
NOTCH3-203ENST00000595514 R3HDM1Q15032 1099 aaKnown RBP15.88■□□□□ 0.13
NOTCH3-203ENST00000595514 KRT27Q7Z3Y8 459 aa15.88■□□□□ 0.13
NOTCH3-203ENST00000595514 SLIT2O94813 1529 aa15.88■□□□□ 0.13
NOTCH3-203ENST00000595514 ESCO1Q5FWF5 840 aa15.87■□□□□ 0.13
NOTCH3-203ENST00000595514 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.87■□□□□ 0.13
NOTCH3-203ENST00000595514 XPCQ01831 940 aaPredicted RBP15.86■□□□□ 0.13
NOTCH3-203ENST00000595514 E9PCH4 1651 aa15.86■□□□□ 0.13
NOTCH3-203ENST00000595514 CCDC9Q9Y3X0 531 aaKnown RBP15.85■□□□□ 0.13
NOTCH3-203ENST00000595514 MARF1Q9Y4F3 1742 aaKnown RBP15.85■□□□□ 0.13
NOTCH3-203ENST00000595514 A0A0G2JS52 829 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 FOXO3O43524 673 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 MYT1Q01538 1121 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 VPS72Q15906 364 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 BRWD3Q6RI45 1802 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 ROBO2Q9HCK4 1378 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 PXDNQ92626 1479 aa15.84■□□□□ 0.13
NOTCH3-203ENST00000595514 EN1Q05925 392 aaPredicted RBP15.83■□□□□ 0.12
NOTCH3-203ENST00000595514 LRPPRCP42704 1394 aaKnown RBP15.83■□□□□ 0.12
NOTCH3-203ENST00000595514 IQGAP3Q86VI3 1631 aa15.83■□□□□ 0.12
NOTCH3-203ENST00000595514 ONECUT3O60422 494 aaPredicted RBP15.82■□□□□ 0.12
NOTCH3-203ENST00000595514 APLP2Q06481 763 aa15.82■□□□□ 0.12
NOTCH3-203ENST00000595514 HAP1P54257 671 aaPredicted RBP15.81■□□□□ 0.12
NOTCH3-203ENST00000595514 DCAF8L1A6NGE4 600 aa15.8■□□□□ 0.12
NOTCH3-203ENST00000595514 FAM50AQ14320 339 aaKnown RBP15.8■□□□□ 0.12
NOTCH3-203ENST00000595514 HFM1A2PYH4 1435 aa15.78■□□□□ 0.12
NOTCH3-203ENST00000595514 NUP155O75694 1391 aa15.77■□□□□ 0.12
NOTCH3-203ENST00000595514 IFFO2Q5TF58 517 aa15.77■□□□□ 0.12
NOTCH3-203ENST00000595514 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
NOTCH3-203ENST00000595514 USP32Q8NFA0 1604 aa15.76■□□□□ 0.11
NOTCH3-203ENST00000595514 PRAG1Q86YV5 1406 aa15.75■□□□□ 0.11
NOTCH3-203ENST00000595514 FAM98CQ17RN3 349 aaKnown RBP15.74■□□□□ 0.11
NOTCH3-203ENST00000595514 DISP2A7MBM2 1401 aa15.74■□□□□ 0.11
NOTCH3-203ENST00000595514 NEXMIFQ5QGS0 1516 aa15.73■□□□□ 0.11
NOTCH3-203ENST00000595514 NUTM2FA1L443 756 aa15.73■□□□□ 0.11
NOTCH3-203ENST00000595514 EZH2Q15910 746 aaKnown RBP15.73■□□□□ 0.11
NOTCH3-203ENST00000595514 CDC42BPGQ6DT37 1551 aa15.73■□□□□ 0.11
NOTCH3-203ENST00000595514 CCDC144AA2RUR9 1427 aa15.72■□□□□ 0.11
NOTCH3-203ENST00000595514 PLEKHG5O94827 1062 aa15.72■□□□□ 0.11
NOTCH3-203ENST00000595514 PPP1R1BQ9UD71 204 aaPredicted RBP15.72■□□□□ 0.11
NOTCH3-203ENST00000595514 SENP3-EIF4A1A0A087X0R7 540 aa15.71■□□□□ 0.11
NOTCH3-203ENST00000595514 VGFO15240 615 aaPredicted RBP15.71■□□□□ 0.11
NOTCH3-203ENST00000595514 FAM182BQ5T319 152 aa15.71■□□□□ 0.11
NOTCH3-203ENST00000595514 KRT28Q7Z3Y7 464 aa15.71■□□□□ 0.11
NOTCH3-203ENST00000595514 CABLES1Q8TDN4 633 aa15.71■□□□□ 0.11
NOTCH3-203ENST00000595514 RGPD1P0DJD0 1748 aa15.71■□□□□ 0.1
NOTCH3-203ENST00000595514 NAIPQ13075 1403 aa15.68■□□□□ 0.1
NOTCH3-203ENST00000595514 NWD2Q9ULI1 1742 aa15.68■□□□□ 0.1
NOTCH3-203ENST00000595514 CAMKK2Q96RR4 588 aa15.68■□□□□ 0.1
NOTCH3-203ENST00000595514 PLCH1Q4KWH8 1693 aa15.67■□□□□ 0.1
NOTCH3-203ENST00000595514 NINLQ9Y2I6 1382 aa15.67■□□□□ 0.1
NOTCH3-203ENST00000595514 TNS3Q68CZ2 1445 aa15.67■□□□□ 0.1
NOTCH3-203ENST00000595514 ROCK1Q13464 1354 aa15.66■□□□□ 0.1
NOTCH3-203ENST00000595514 PARD3Q8TEW0 1356 aa15.66■□□□□ 0.1
NOTCH3-203ENST00000595514 FAM83GA6ND36 823 aa15.66■□□□□ 0.1
NOTCH3-203ENST00000595514 PSME1Q06323 249 aa15.66■□□□□ 0.1
NOTCH3-203ENST00000595514 LMOD2Q6P5Q4 547 aa15.66■□□□□ 0.1
NOTCH3-203ENST00000595514 SPON1Q9HCB6 807 aa15.66■□□□□ 0.1
NOTCH3-203ENST00000595514 TRIM37O94972 964 aa15.65■□□□□ 0.1
NOTCH3-203ENST00000595514 NBPF8Q3BBV2 869 aa15.65■□□□□ 0.1
NOTCH3-203ENST00000595514 NBPF14Q5TI25 921 aa15.65■□□□□ 0.1
NOTCH3-203ENST00000595514 ZNF784Q8NCA9 323 aaPredicted RBP15.65■□□□□ 0.1
NOTCH3-203ENST00000595514 ADGRB2O60241 1585 aa15.65■□□□□ 0.1
NOTCH3-203ENST00000595514 APBA3O96018 575 aa15.64■□□□□ 0.09
NOTCH3-203ENST00000595514 BTG4Q9NY30 223 aa15.64■□□□□ 0.09
NOTCH3-203ENST00000595514 ARHGEF10O15013 1369 aa15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 CLTCL1P53675 1640 aa15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 KCNQ2O43526 872 aa15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 FAM196AQ6ZSG2 479 aa15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 WAPLQ7Z5K2 1190 aa15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 KIF1AQ12756 1690 aa15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 TNS1Q9HBL0 1735 aaKnown RBP15.62■□□□□ 0.09
NOTCH3-203ENST00000595514 STK26Q9P289 416 aa15.61■□□□□ 0.09
NOTCH3-203ENST00000595514 UTRNP46939 3433 aa15.61■□□□□ 0.09
NOTCH3-203ENST00000595514 SBNO1A3KN83 1393 aa15.61■□□□□ 0.09
NOTCH3-203ENST00000595514 C1QTNF8P60827 252 aa15.6■□□□□ 0.09
NOTCH3-203ENST00000595514 PHF8Q9UPP1 1060 aa15.6■□□□□ 0.09
NOTCH3-203ENST00000595514 SPATA31A5Q5VU36 1347 aa15.6■□□□□ 0.09
NOTCH3-203ENST00000595514 RPGRIP1LQ68CZ1 1315 aa15.6■□□□□ 0.09
NOTCH3-203ENST00000595514 SPATA31A7Q8IWB4 1347 aa15.6■□□□□ 0.09
NOTCH3-203ENST00000595514 NRAPQ86VF7 1730 aa15.57■□□□□ 0.08
NOTCH3-203ENST00000595514 TECPR2O15040 1411 aa15.56■□□□□ 0.08
NOTCH3-203ENST00000595514 KIF1BO60333 1816 aa15.56■□□□□ 0.08
NOTCH3-203ENST00000595514 ABCA3Q99758 1704 aa15.55■□□□□ 0.08
NOTCH3-203ENST00000595514 THSD7AQ9UPZ6 1657 aa15.55■□□□□ 0.08
NOTCH3-203ENST00000595514 PLEKHH1Q9ULM0 1364 aa15.55■□□□□ 0.08
NOTCH3-203ENST00000595514 FMN2Q9NZ56 1722 aa15.54■□□□□ 0.08
NOTCH3-203ENST00000595514 RRBP1Q9P2E9 1410 aaKnown RBP15.53■□□□□ 0.08
NOTCH3-203ENST00000595514 ABCC11Q96J66 1382 aa15.53■□□□□ 0.08
NOTCH3-203ENST00000595514 ITGAEP38570 1179 aa15.53■□□□□ 0.08
NOTCH3-203ENST00000595514 CAMTA1Q9Y6Y1 1673 aa15.53■□□□□ 0.08
NOTCH3-203ENST00000595514 NRXN1Q9ULB1 1477 aa15.52■□□□□ 0.08
NOTCH3-203ENST00000595514 COL14A1Q05707 1796 aaKnown RBP15.52■□□□□ 0.07
NOTCH3-203ENST00000595514 RREB1Q92766 1687 aa15.51■□□□□ 0.07
NOTCH3-203ENST00000595514 SPATA31A1Q5TZJ5 1347 aa15.51■□□□□ 0.07
NOTCH3-203ENST00000595514 PDE3BQ13370 1112 aa15.51■□□□□ 0.07
NOTCH3-203ENST00000595514 NUP188Q5SRE5 1749 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms