RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 NLRP13Q86W25 1043 aa20.44■□□□□ 0.86
PNKP-204ENST00000594661 AMER1Q5JTC6 1135 aaPredicted RBP20.43■□□□□ 0.86
PNKP-204ENST00000594661 STK26Q9P289 416 aa20.43■□□□□ 0.86
PNKP-204ENST00000594661 TULP4Q9NRJ4 1543 aa20.42■□□□□ 0.86
PNKP-204ENST00000594661 YTHDC2Q9H6S0 1430 aaKnown RBP20.42■□□□□ 0.86
PNKP-204ENST00000594661 PTPRMP28827 1452 aa20.41■□□□□ 0.86
PNKP-204ENST00000594661 LRPPRCP42704 1394 aaKnown RBP20.4■□□□□ 0.86
PNKP-204ENST00000594661 SETD1AO15047 1707 aaKnown RBP20.4■□□□□ 0.86
PNKP-204ENST00000594661 ANP32AP39687 249 aaKnown RBP20.39■□□□□ 0.85
PNKP-204ENST00000594661 SAFB2Q14151 953 aaKnown RBP eCLIP20.39■□□□□ 0.85
PNKP-204ENST00000594661 USP35Q9P2H5 1018 aa20.39■□□□□ 0.85
PNKP-204ENST00000594661 UBR1Q8IWV7 1749 aa20.38■□□□□ 0.85
PNKP-204ENST00000594661 NRXN3Q9Y4C0 1643 aa20.38■□□□□ 0.85
PNKP-204ENST00000594661 CEBPAP49715 358 aaPredicted RBP20.38■□□□□ 0.85
PNKP-204ENST00000594661 CARD14Q9BXL6 1004 aa20.38■□□□□ 0.85
PNKP-204ENST00000594661 ZBTB47Q9UFB7 747 aaPredicted RBP20.38■□□□□ 0.85
PNKP-204ENST00000594661 FER1L4A9Z1Z3 1794 aa20.37■□□□□ 0.85
PNKP-204ENST00000594661 C3P01024 1663 aa20.37■□□□□ 0.85
PNKP-204ENST00000594661 NPC1L1Q9UHC9 1359 aa20.36■□□□□ 0.85
PNKP-204ENST00000594661 EVC2Q86UK5 1308 aa20.36■□□□□ 0.85
PNKP-204ENST00000594661 PRAM1Q96QH2 718 aa20.35■□□□□ 0.85
PNKP-204ENST00000594661 SLC12A5Q9H2X9 1139 aa20.35■□□□□ 0.85
PNKP-204ENST00000594661 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.34■□□□□ 0.85
PNKP-204ENST00000594661 TMEM2Q9UHN6 1383 aa20.32■□□□□ 0.84
PNKP-204ENST00000594661 PPP2R1AP30153 589 aa20.32■□□□□ 0.84
PNKP-204ENST00000594661 PUS7Q96PZ0 661 aaKnown RBP20.32■□□□□ 0.84
PNKP-204ENST00000594661 CABP2Q9NPB3 220 aa20.32■□□□□ 0.84
PNKP-204ENST00000594661 NLRP1Q9C000 1473 aa20.32■□□□□ 0.84
PNKP-204ENST00000594661 SENP3-EIF4A1A0A087X0R7 540 aa20.31■□□□□ 0.84
PNKP-204ENST00000594661 B4GALNT3Q6L9W6 998 aa20.31■□□□□ 0.84
PNKP-204ENST00000594661 POGKQ9P215 609 aa20.31■□□□□ 0.84
PNKP-204ENST00000594661 MINK1Q8N4C8 1332 aaPredicted RBP20.31■□□□□ 0.84
PNKP-204ENST00000594661 NSD3Q9BZ95 1437 aa20.3■□□□□ 0.84
PNKP-204ENST00000594661 DLC1Q96QB1 1528 aa20.3■□□□□ 0.84
PNKP-204ENST00000594661 PLPPR3Q6T4P5 718 aa20.29■□□□□ 0.84
PNKP-204ENST00000594661 METP08581 1390 aa20.29■□□□□ 0.84
PNKP-204ENST00000594661 SMG6Q86US8 1419 aaKnown RBP20.28■□□□□ 0.84
PNKP-204ENST00000594661 HDGFP51858 240 aaKnown RBP20.27■□□□□ 0.84
PNKP-204ENST00000594661 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
PNKP-204ENST00000594661 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
PNKP-204ENST00000594661 SRPK2P78362 688 aaKnown RBP20.26■□□□□ 0.83
PNKP-204ENST00000594661 WAPLQ7Z5K2 1190 aa20.25■□□□□ 0.83
PNKP-204ENST00000594661 NUDCQ9Y266 331 aa20.25■□□□□ 0.83
PNKP-204ENST00000594661 USP32Q8NFA0 1604 aa20.25■□□□□ 0.83
PNKP-204ENST00000594661 ANKRD36BQ8N2N9 1353 aa20.25■□□□□ 0.83
PNKP-204ENST00000594661 RSPH6AQ9H0K4 717 aa20.24■□□□□ 0.83
PNKP-204ENST00000594661 LTKP29376 864 aa20.23■□□□□ 0.83
PNKP-204ENST00000594661 BLMP54132 1417 aaPredicted RBP20.22■□□□□ 0.83
PNKP-204ENST00000594661 ADAMTS13Q76LX8 1427 aa20.22■□□□□ 0.83
PNKP-204ENST00000594661 KNDC1Q76NI1 1749 aa20.21■□□□□ 0.83
PNKP-204ENST00000594661 ATAD2Q6PL18 1390 aa20.21■□□□□ 0.83
PNKP-204ENST00000594661 NINLQ9Y2I6 1382 aa20.21■□□□□ 0.83
PNKP-204ENST00000594661 CDK19Q9BWU1 502 aa20.2■□□□□ 0.82
PNKP-204ENST00000594661 INSRP06213 1382 aa20.2■□□□□ 0.82
PNKP-204ENST00000594661 PLEKHG1Q9ULL1 1385 aa20.2■□□□□ 0.82
PNKP-204ENST00000594661 A0A1W2PP64 1363 aa20.2■□□□□ 0.82
PNKP-204ENST00000594661 SLIT1O75093 1534 aa20.19■□□□□ 0.82
PNKP-204ENST00000594661 ARHGAP23Q9P227 1491 aa20.19■□□□□ 0.82
PNKP-204ENST00000594661 TECPR2O15040 1411 aa20.19■□□□□ 0.82
PNKP-204ENST00000594661 BRPF3Q9ULD4 1205 aa20.19■□□□□ 0.82
PNKP-204ENST00000594661 RIMS1Q86UR5 1692 aaKnown RBP20.19■□□□□ 0.82
PNKP-204ENST00000594661 NEFMP07197 916 aa20.18■□□□□ 0.82
PNKP-204ENST00000594661 TXNDC2Q86VQ3 553 aa20.18■□□□□ 0.82
PNKP-204ENST00000594661 CPS1P31327 1500 aa20.18■□□□□ 0.82
PNKP-204ENST00000594661 CGNL1Q0VF96 1302 aa20.18■□□□□ 0.82
PNKP-204ENST00000594661 ADAMTS8Q9UP79 889 aa20.18■□□□□ 0.82
PNKP-204ENST00000594661 CD163L1Q9NR16 1453 aa20.18■□□□□ 0.82
PNKP-204ENST00000594661 MORC1Q86VD1 984 aa20.16■□□□□ 0.82
PNKP-204ENST00000594661 FAM135BQ49AJ0 1406 aa20.15■□□□□ 0.82
PNKP-204ENST00000594661 WDR43Q15061 677 aaKnown RBP eCLIP20.15■□□□□ 0.82
PNKP-204ENST00000594661 MED14O60244 1454 aa20.14■□□□□ 0.82
PNKP-204ENST00000594661 PPM1GO15355 546 aaPredicted RBP20.14■□□□□ 0.81
PNKP-204ENST00000594661 EID1Q9Y6B2 187 aa20.14■□□□□ 0.81
PNKP-204ENST00000594661 TNNT2P45379 298 aaPredicted RBP20.13■□□□□ 0.81
PNKP-204ENST00000594661 GLIPR1L2Q4G1C9 344 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 SIRT1Q96EB6 747 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 NSD2O96028 1365 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 ROBO2Q9HCK4 1378 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 SLC26A8Q96RN1 970 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 TERF2IPQ9NYB0 399 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 CABP1Q9NZU7 370 aa20.12■□□□□ 0.81
PNKP-204ENST00000594661 ADAMTSL3P82987 1691 aa20.11■□□□□ 0.81
PNKP-204ENST00000594661 CEP170BQ9Y4F5 1589 aaPredicted RBP20.11■□□□□ 0.81
PNKP-204ENST00000594661 THEMISQ8N1K5 641 aaPredicted RBP20.11■□□□□ 0.81
PNKP-204ENST00000594661 POLR3AO14802 1390 aaPredicted RBP20.1■□□□□ 0.81
PNKP-204ENST00000594661 WASLO00401 505 aaPredicted RBP20.1■□□□□ 0.81
PNKP-204ENST00000594661 PTPRUQ92729 1446 aa20.1■□□□□ 0.81
PNKP-204ENST00000594661 RNF123Q5XPI4 1314 aa20.1■□□□□ 0.81
PNKP-204ENST00000594661 GSE1Q14687 1217 aa20.09■□□□□ 0.81
PNKP-204ENST00000594661 PDE3BQ13370 1112 aa20.08■□□□□ 0.8
PNKP-204ENST00000594661 HDGFL2Q7Z4V5 671 aaPredicted RBP20.08■□□□□ 0.8
PNKP-204ENST00000594661 FAM43AQ8N2R8 423 aa20.08■□□□□ 0.8
PNKP-204ENST00000594661 ATP7BP35670 1465 aa20.07■□□□□ 0.8
PNKP-204ENST00000594661 SHPRHQ149N8 1683 aa20.06■□□□□ 0.8
PNKP-204ENST00000594661 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.06■□□□□ 0.8
PNKP-204ENST00000594661 ANKRD26Q9UPS8 1709 aa20.06■□□□□ 0.8
PNKP-204ENST00000594661 GGNBP2Q9H3C7 697 aa20.06■□□□□ 0.8
PNKP-204ENST00000594661 FYB1O15117 783 aa20.05■□□□□ 0.8
PNKP-204ENST00000594661 PPIP5K1Q6PFW1 1433 aa20.05■□□□□ 0.8
PNKP-204ENST00000594661 MTHFSP49914 203 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms