RNA–Protein interactions for RNA: ENST00000594163.1

C19orf54-204, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 3

Gene C19orf54, Length 519 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-204ENST00000594163 ROBO1Q9Y6N7 1651 aa10.05□□□□□ -0.8
C19orf54-204ENST00000594163 DCAF8L1A6NGE4 600 aa10.04□□□□□ -0.8
C19orf54-204ENST00000594163 IFFO2Q5TF58 517 aa10.04□□□□□ -0.8
C19orf54-204ENST00000594163 BCCIPQ9P287 314 aaKnown RBP eCLIP10.04□□□□□ -0.8
C19orf54-204ENST00000594163 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.04□□□□□ -0.8
C19orf54-204ENST00000594163 PPP1R15AO75807 674 aaPredicted RBP10.03□□□□□ -0.8
C19orf54-204ENST00000594163 NALCNQ8IZF0 1738 aa10.03□□□□□ -0.8
C19orf54-204ENST00000594163 TMEM94Q12767 1356 aa10.02□□□□□ -0.8
C19orf54-204ENST00000594163 DHX37Q8IY37 1157 aaKnown RBP10.02□□□□□ -0.81
C19orf54-204ENST00000594163 RBM33Q96EV2 1170 aaKnown RBP10.02□□□□□ -0.81
C19orf54-204ENST00000594163 PTPRUQ92729 1446 aa10.01□□□□□ -0.81
C19orf54-204ENST00000594163 KCNA6P17658 529 aa10.01□□□□□ -0.81
C19orf54-204ENST00000594163 BCL11BQ9C0K0 894 aaPredicted RBP10.01□□□□□ -0.81
C19orf54-204ENST00000594163 FAM135BQ49AJ0 1406 aa10□□□□□ -0.81
C19orf54-204ENST00000594163 RXRBP28702 533 aa10□□□□□ -0.81
C19orf54-204ENST00000594163 ZRANB1Q9UGI0 708 aa10□□□□□ -0.81
C19orf54-204ENST00000594163 SETD5Q9C0A6 1442 aa9.99□□□□□ -0.81
C19orf54-204ENST00000594163 PHLPP1O60346 1717 aa9.99□□□□□ -0.81
C19orf54-204ENST00000594163 ERICH6BQ5W0A0 696 aa9.99□□□□□ -0.81
C19orf54-204ENST00000594163 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.99□□□□□ -0.81
C19orf54-204ENST00000594163 ANO8Q9HCE9 1232 aaPredicted RBP9.99□□□□□ -0.81
C19orf54-204ENST00000594163 RAB3GAP2Q9H2M9 1393 aa9.99□□□□□ -0.81
C19orf54-204ENST00000594163 ZNF772Q68DY9 489 aaPredicted RBP9.98□□□□□ -0.81
C19orf54-204ENST00000594163 HDGFP51858 240 aaKnown RBP9.97□□□□□ -0.81
C19orf54-204ENST00000594163 PROSER2Q86WR7 435 aaPredicted RBP9.97□□□□□ -0.81
C19orf54-204ENST00000594163 TBX22Q9Y458 520 aa9.97□□□□□ -0.81
C19orf54-204ENST00000594163 METP08581 1390 aa9.97□□□□□ -0.81
C19orf54-204ENST00000594163 PIK3R4Q99570 1358 aa9.97□□□□□ -0.81
C19orf54-204ENST00000594163 SPATA31E1Q6ZUB1 1445 aa9.97□□□□□ -0.81
C19orf54-204ENST00000594163 KNDC1Q76NI1 1749 aa9.96□□□□□ -0.81
C19orf54-204ENST00000594163 MPHOSPH9Q99550 1183 aa9.96□□□□□ -0.82
C19orf54-204ENST00000594163 CCDC144AA2RUR9 1427 aa9.96□□□□□ -0.82
C19orf54-204ENST00000594163 ASXL1Q8IXJ9 1541 aa9.96□□□□□ -0.82
C19orf54-204ENST00000594163 LRP6O75581 1613 aa9.96□□□□□ -0.82
C19orf54-204ENST00000594163 MSH6P52701 1360 aa9.95□□□□□ -0.82
C19orf54-204ENST00000594163 COL16A1Q07092 1604 aaPredicted RBP9.95□□□□□ -0.82
C19orf54-204ENST00000594163 NHSL1Q5SYE7 1610 aa9.94□□□□□ -0.82
C19orf54-204ENST00000594163 U3KPZ7 1027 aaPredicted RBP9.94□□□□□ -0.82
C19orf54-204ENST00000594163 JCADQ9P266 1359 aa9.93□□□□□ -0.82
C19orf54-204ENST00000594163 MEX3CQ5U5Q3 659 aaKnown RBP9.93□□□□□ -0.82
C19orf54-204ENST00000594163 AMOTL2Q9Y2J4 779 aa9.93□□□□□ -0.82
C19orf54-204ENST00000594163 LAMC1P11047 1609 aa9.93□□□□□ -0.82
C19orf54-204ENST00000594163 CDK12Q9NYV4 1490 aaPredicted RBP9.92□□□□□ -0.82
C19orf54-204ENST00000594163 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
C19orf54-204ENST00000594163 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
C19orf54-204ENST00000594163 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
C19orf54-204ENST00000594163 PUS7Q96PZ0 661 aaKnown RBP9.92□□□□□ -0.82
C19orf54-204ENST00000594163 RGPD8O14715 1765 aaPredicted RBP9.92□□□□□ -0.82
C19orf54-204ENST00000594163 NCOA3Q9Y6Q9 1424 aa9.91□□□□□ -0.82
C19orf54-204ENST00000594163 SHPRHQ149N8 1683 aa9.91□□□□□ -0.82
C19orf54-204ENST00000594163 AHDC1Q5TGY3 1603 aaPredicted RBP9.91□□□□□ -0.82
C19orf54-204ENST00000594163 PTCH1Q13635 1447 aa9.9□□□□□ -0.82
C19orf54-204ENST00000594163 PRAG1Q86YV5 1406 aa9.9□□□□□ -0.82
C19orf54-204ENST00000594163 ADGRL3Q9HAR2 1447 aa9.9□□□□□ -0.82
C19orf54-204ENST00000594163 ADGRF5Q8IZF2 1346 aa9.9□□□□□ -0.82
C19orf54-204ENST00000594163 CCDC9Q9Y3X0 531 aaKnown RBP9.9□□□□□ -0.82
C19orf54-204ENST00000594163 RGS12O14924 1447 aa9.9□□□□□ -0.83
C19orf54-204ENST00000594163 PIK3C2GO75747 1445 aa9.9□□□□□ -0.83
C19orf54-204ENST00000594163 RPGRIP1LQ68CZ1 1315 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 RSPH6AQ9H0K4 717 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 MYOM2P54296 1465 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 NRXN1Q9ULB1 1477 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 DCCP43146 1447 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 MST1RQ04912 1400 aa9.89□□□□□ -0.83
C19orf54-204ENST00000594163 ROBO2Q9HCK4 1378 aa9.88□□□□□ -0.83
C19orf54-204ENST00000594163 FMN2Q9NZ56 1722 aa9.88□□□□□ -0.83
C19orf54-204ENST00000594163 SLAIN2Q9P270 581 aa9.88□□□□□ -0.83
C19orf54-204ENST00000594163 CDC42BPGQ6DT37 1551 aa9.88□□□□□ -0.83
C19orf54-204ENST00000594163 ANKRD30BQ9BXX2 1392 aa9.88□□□□□ -0.83
C19orf54-204ENST00000594163 VGFO15240 615 aaPredicted RBP9.87□□□□□ -0.83
C19orf54-204ENST00000594163 C19orf44Q9H6X5 657 aa9.86□□□□□ -0.83
C19orf54-204ENST00000594163 SPATA31A6Q5VVP1 1343 aa9.85□□□□□ -0.83
C19orf54-204ENST00000594163 CLSPNQ9HAW4 1339 aa9.85□□□□□ -0.83
C19orf54-204ENST00000594163 ARHGEF28Q8N1W1 1705 aaKnown RBP9.85□□□□□ -0.83
C19orf54-204ENST00000594163 TECPR2O15040 1411 aa9.85□□□□□ -0.83
C19orf54-204ENST00000594163 IGSF3O75054 1194 aa9.85□□□□□ -0.83
C19orf54-204ENST00000594163 AAMPQ13685 434 aa9.85□□□□□ -0.83
C19orf54-204ENST00000594163 CADPS2Q86UW7 1296 aa9.85□□□□□ -0.83
C19orf54-204ENST00000594163 AFF2P51816 1311 aa9.84□□□□□ -0.83
C19orf54-204ENST00000594163 ACIN1Q9UKV3 1341 aaKnown RBP9.84□□□□□ -0.83
C19orf54-204ENST00000594163 ADGRB1O14514 1584 aa9.84□□□□□ -0.83
C19orf54-204ENST00000594163 ATF3P18847 181 aa9.84□□□□□ -0.83
C19orf54-204ENST00000594163 YY1P25490 414 aa9.84□□□□□ -0.83
C19orf54-204ENST00000594163 KDM2AQ9Y2K7 1162 aa9.84□□□□□ -0.83
C19orf54-204ENST00000594163 ZEB1P37275 1124 aaPredicted RBP9.83□□□□□ -0.84
C19orf54-204ENST00000594163 RBM6P78332 1123 aaKnown RBP9.83□□□□□ -0.84
C19orf54-204ENST00000594163 BRINP3Q76B58 766 aa9.83□□□□□ -0.84
C19orf54-204ENST00000594163 PLEKHH1Q9ULM0 1364 aa9.83□□□□□ -0.84
C19orf54-204ENST00000594163 C1orf167Q5SNV9 1468 aa9.83□□□□□ -0.84
C19orf54-204ENST00000594163 YTHDC2Q9H6S0 1430 aaKnown RBP9.82□□□□□ -0.84
C19orf54-204ENST00000594163 USP32Q8NFA0 1604 aa9.82□□□□□ -0.84
C19orf54-204ENST00000594163 KIAA1210Q9ULL0 1709 aa9.82□□□□□ -0.84
C19orf54-204ENST00000594163 MARF1Q9Y4F3 1742 aaKnown RBP9.82□□□□□ -0.84
C19orf54-204ENST00000594163 TMEM132EQ6IEE7 984 aa9.82□□□□□ -0.84
C19orf54-204ENST00000594163 ARID3AQ99856 593 aa9.82□□□□□ -0.84
C19orf54-204ENST00000594163 QTRT2Q9H974 415 aaKnown RBP9.82□□□□□ -0.84
C19orf54-204ENST00000594163 LRPPRCP42704 1394 aaKnown RBP9.82□□□□□ -0.84
C19orf54-204ENST00000594163 ATAD2Q6PL18 1390 aa9.82□□□□□ -0.84
C19orf54-204ENST00000594163 STK26Q9P289 416 aa9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms