RNA–Protein interactions for RNA: ENST00000593282.5

LINC01539-206, Transcript of long intergenic non-protein coding RNA 1539, humanhuman

TSL 4 BASIC

Gene LINC01539, Length 678 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01539-206ENST00000593282 RNF19BQ6ZMZ0 732 aa8.31□□□□□ -1.08
LINC01539-206ENST00000593282 CYP4X1Q8N118 509 aa8.31□□□□□ -1.08
LINC01539-206ENST00000593282 MDM2Q00987 491 aaPredicted RBP8.3□□□□□ -1.08
LINC01539-206ENST00000593282 MSS51Q4VC12 460 aa8.3□□□□□ -1.08
LINC01539-206ENST00000593282 PKD2L1Q9P0L9 805 aa8.3□□□□□ -1.08
LINC01539-206ENST00000593282 CD46P15529 392 aa8.29□□□□□ -1.08
LINC01539-206ENST00000593282 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC01539-206ENST00000593282 ST8SIA5O15466 376 aa8.28□□□□□ -1.08
LINC01539-206ENST00000593282 KDM4AO75164 1064 aa8.28□□□□□ -1.08
LINC01539-206ENST00000593282 KRI1Q8N9T8 703 aaKnown RBP8.28□□□□□ -1.08
LINC01539-206ENST00000593282 ZNF775Q96BV0 537 aaPredicted RBP8.28□□□□□ -1.08
LINC01539-206ENST00000593282 TTC24A2A3L6 582 aaPredicted RBP8.27□□□□□ -1.09
LINC01539-206ENST00000593282 IRF6O14896 467 aa8.27□□□□□ -1.09
LINC01539-206ENST00000593282 MINK1Q8N4C8 1332 aaPredicted RBP8.27□□□□□ -1.09
LINC01539-206ENST00000593282 AAASQ9NRG9 546 aa8.26□□□□□ -1.09
LINC01539-206ENST00000593282 USP46P62068 366 aa8.25□□□□□ -1.09
LINC01539-206ENST00000593282 CCDC24Q8N4L8 307 aa8.25□□□□□ -1.09
LINC01539-206ENST00000593282 CCDC102AQ96A19 550 aa8.25□□□□□ -1.09
LINC01539-206ENST00000593282 USB1Q9BQ65 265 aaKnown RBP8.25□□□□□ -1.09
LINC01539-206ENST00000593282 POTECB2RU33 542 aa8.23□□□□□ -1.09
LINC01539-206ENST00000593282 AXIN1O15169 862 aa8.23□□□□□ -1.09
LINC01539-206ENST00000593282 CLCN1P35523 988 aa8.23□□□□□ -1.09
LINC01539-206ENST00000593282 TRIM32Q13049 653 aa8.23□□□□□ -1.09
LINC01539-206ENST00000593282 GPCPD1Q9NPB8 672 aa8.23□□□□□ -1.09
LINC01539-206ENST00000593282 TOR4AQ9NXH8 423 aa8.23□□□□□ -1.09
LINC01539-206ENST00000593282 MMP16P51512 607 aa8.22□□□□□ -1.09
LINC01539-206ENST00000593282 C14orf37Q86TY3 774 aa8.22□□□□□ -1.09
LINC01539-206ENST00000593282 NUTM1Q86Y26 1132 aa8.22□□□□□ -1.09
LINC01539-206ENST00000593282 HLA-CQ95604 372 aa8.22□□□□□ -1.09
LINC01539-206ENST00000593282 HOXA2O43364 376 aa8.21□□□□□ -1.1
LINC01539-206ENST00000593282 CTC1Q2NKJ3 1217 aa8.21□□□□□ -1.1
LINC01539-206ENST00000593282 WNT7AO00755 349 aa8.2□□□□□ -1.1
LINC01539-206ENST00000593282 DXOO77932 396 aaKnown RBP8.2□□□□□ -1.1
LINC01539-206ENST00000593282 AVPP01185 164 aa8.19□□□□□ -1.1
LINC01539-206ENST00000593282 GUCA2AQ02747 115 aa8.19□□□□□ -1.1
LINC01539-206ENST00000593282 CRIPAKQ8N1N5 446 aa8.19□□□□□ -1.1
LINC01539-206ENST00000593282 SNIP1Q8TAD8 396 aaKnown RBP8.19□□□□□ -1.1
LINC01539-206ENST00000593282 REPIN1Q9BWE0 567 aaKnown RBP8.19□□□□□ -1.1
LINC01539-206ENST00000593282 MRGPRX2Q96LB1 330 aa8.18□□□□□ -1.1
LINC01539-206ENST00000593282 FAM217BQ9NTX9 383 aaPredicted RBP8.18□□□□□ -1.1
LINC01539-206ENST00000593282 C11orf95C9JLR9 678 aaPredicted RBP8.17□□□□□ -1.1
LINC01539-206ENST00000593282 DACH1Q9UI36 760 aa8.17□□□□□ -1.1
LINC01539-206ENST00000593282 JUNDP17535 347 aa8.16□□□□□ -1.1
LINC01539-206ENST00000593282 ZC3H15Q8WU90 426 aaKnown RBP8.16□□□□□ -1.1
LINC01539-206ENST00000593282 SYMPKQ92797 1274 aaKnown RBP8.16□□□□□ -1.1
LINC01539-206ENST00000593282 GMPR2Q9P2T1 348 aaKnown RBP8.16□□□□□ -1.1
LINC01539-206ENST00000593282 C6orf229H3BNL8 230 aa8.15□□□□□ -1.1
LINC01539-206ENST00000593282 TTLL12Q14166 644 aaPredicted RBP8.15□□□□□ -1.1
LINC01539-206ENST00000593282 SMPD1P17405 629 aa8.14□□□□□ -1.11
LINC01539-206ENST00000593282 SMCPP49901 116 aaPredicted RBP8.14□□□□□ -1.11
LINC01539-206ENST00000593282 RETREG3Q86VR2 466 aa8.14□□□□□ -1.11
LINC01539-206ENST00000593282 J3QL48 77 aa8.13□□□□□ -1.11
LINC01539-206ENST00000593282 FDX1P10109 184 aa8.13□□□□□ -1.11
LINC01539-206ENST00000593282 WNT7BP56706 349 aa8.13□□□□□ -1.11
LINC01539-206ENST00000593282 RC3H1Q5TC82 1133 aaKnown RBP8.13□□□□□ -1.11
LINC01539-206ENST00000593282 NUDT12Q9BQG2 462 aa8.13□□□□□ -1.11
LINC01539-206ENST00000593282 SSTR3P32745 418 aaPredicted RBP8.11□□□□□ -1.11
LINC01539-206ENST00000593282 TREML4Q6UXN2 200 aa8.11□□□□□ -1.11
LINC01539-206ENST00000593282 ALDH1A1P00352 501 aa8.1□□□□□ -1.11
LINC01539-206ENST00000593282 MS4A1P11836 297 aa8.1□□□□□ -1.11
LINC01539-206ENST00000593282 SKOR1P84550 965 aa8.1□□□□□ -1.11
LINC01539-206ENST00000593282 EHBP1Q8NDI1 1231 aa8.1□□□□□ -1.11
LINC01539-206ENST00000593282 ATP13A2Q9NQ11 1180 aa8.1□□□□□ -1.11
LINC01539-206ENST00000593282 HPS1Q92902 700 aa8.09□□□□□ -1.11
LINC01539-206ENST00000593282 SLC24A3Q9HC58 644 aa8.09□□□□□ -1.11
LINC01539-206ENST00000593282 SENP2Q9HC62 589 aa8.09□□□□□ -1.11
LINC01539-206ENST00000593282 CCNYL3P0C7X3 344 aa8.08□□□□□ -1.12
LINC01539-206ENST00000593282 SPIRE2Q8WWL2 714 aa8.08□□□□□ -1.12
LINC01539-206ENST00000593282 WFS1O76024 890 aa8.07□□□□□ -1.12
LINC01539-206ENST00000593282 NDUFV2P19404 249 aa8.07□□□□□ -1.12
LINC01539-206ENST00000593282 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
LINC01539-206ENST00000593282 WASF2Q9Y6W5 498 aa8.07□□□□□ -1.12
LINC01539-206ENST00000593282 ZMYND10O75800 440 aa8.06□□□□□ -1.12
LINC01539-206ENST00000593282 PTCRAQ6ISU1 281 aaPredicted RBP8.06□□□□□ -1.12
LINC01539-206ENST00000593282 GIGYF2Q6Y7W6 1299 aaKnown RBP8.06□□□□□ -1.12
LINC01539-206ENST00000593282 BARGINQ6ZT62 677 aa8.06□□□□□ -1.12
LINC01539-206ENST00000593282 MOXD2PA6NHM9 499 aa8.05□□□□□ -1.12
LINC01539-206ENST00000593282 KIFC2Q96AC6 838 aa8.05□□□□□ -1.12
LINC01539-206ENST00000593282 MTMR2Q13614 643 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 PTPRNQ16849 979 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 LINC01559Q495D7 138 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 PRR7Q8TB68 274 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 TRIM47Q96LD4 638 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 BEGAINQ9BUH8 593 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
LINC01539-206ENST00000593282 SNRPBP14678 240 aaKnown RBP8.03□□□□□ -1.12
LINC01539-206ENST00000593282 AMHR2Q16671 573 aa8.03□□□□□ -1.12
LINC01539-206ENST00000593282 SPDYE5A6NIY4 337 aa8.02□□□□□ -1.13
LINC01539-206ENST00000593282 BRPF1P55201 1214 aaPredicted RBP8.02□□□□□ -1.13
LINC01539-206ENST00000593282 SH3BP2P78314 561 aa8.02□□□□□ -1.13
LINC01539-206ENST00000593282 CTHP32929 405 aa8.01□□□□□ -1.13
LINC01539-206ENST00000593282 KCNH2Q12809 1159 aa8.01□□□□□ -1.13
LINC01539-206ENST00000593282 DIXDC1Q155Q3 683 aa8.01□□□□□ -1.13
LINC01539-206ENST00000593282 EVA1BQ9NVM1 165 aa8.01□□□□□ -1.13
LINC01539-206ENST00000593282 PODXL2Q9NZ53 605 aa8.01□□□□□ -1.13
LINC01539-206ENST00000593282 CAPN5O15484 640 aaPredicted RBP8□□□□□ -1.13
LINC01539-206ENST00000593282 RANGAP1P46060 587 aaPredicted RBP8□□□□□ -1.13
LINC01539-206ENST00000593282 BAP1Q92560 729 aa8□□□□□ -1.13
LINC01539-206ENST00000593282 TBC1D2Q9BYX2 928 aa8□□□□□ -1.13
LINC01539-206ENST00000593282 SIAH2O43255 324 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms